RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 SOD1P00441 154 aa17.66■□□□□ 0.42
PDLIM4-202ENST00000379018 FASLGP48023 281 aa17.66■□□□□ 0.42
PDLIM4-202ENST00000379018 COPB1P53618 953 aaKnown RBP17.66■□□□□ 0.42
PDLIM4-202ENST00000379018 MC1RQ01726 317 aa17.66■□□□□ 0.42
PDLIM4-202ENST00000379018 FOXM1Q08050 763 aa17.66■□□□□ 0.42
PDLIM4-202ENST00000379018 SQSTM1Q13501 440 aa17.66■□□□□ 0.42
PDLIM4-202ENST00000379018 CHST15Q7LFX5 561 aaPredicted RBP17.66■□□□□ 0.42
PDLIM4-202ENST00000379018 BBS5Q8N3I7 341 aa17.66■□□□□ 0.42
PDLIM4-202ENST00000379018 SFRP1Q8N474 314 aa17.66■□□□□ 0.42
PDLIM4-202ENST00000379018 ATPAF2Q8N5M1 289 aa17.66■□□□□ 0.42
PDLIM4-202ENST00000379018 ZNF599Q96NL3 588 aa17.66■□□□□ 0.42
PDLIM4-202ENST00000379018 EIF3CQ99613 913 aaKnown RBP17.66■□□□□ 0.42
PDLIM4-202ENST00000379018 TRIM7Q9C029 511 aa17.66■□□□□ 0.42
PDLIM4-202ENST00000379018 STN1Q9H668 368 aaKnown RBP17.66■□□□□ 0.42
PDLIM4-202ENST00000379018 LRRC4CQ9HCJ2 640 aa17.66■□□□□ 0.42
PDLIM4-202ENST00000379018 KCNK6Q9Y257 313 aa17.66■□□□□ 0.42
PDLIM4-202ENST00000379018 SPTBN1Q01082 2364 aaKnown RBP17.66■□□□□ 0.42
PDLIM4-202ENST00000379018 PSMD11O00231 422 aa17.65■□□□□ 0.42
PDLIM4-202ENST00000379018 POLR1CO15160 346 aaPredicted RBP17.65■□□□□ 0.42
PDLIM4-202ENST00000379018 ATP1A1P05023 1023 aaKnown RBP17.65■□□□□ 0.42
PDLIM4-202ENST00000379018 AMPD1P23109 780 aa17.65■□□□□ 0.42
PDLIM4-202ENST00000379018 TEAD1P28347 426 aa17.65■□□□□ 0.42
PDLIM4-202ENST00000379018 HSPA9P38646 679 aaKnown RBP17.65■□□□□ 0.42
PDLIM4-202ENST00000379018 MMP13P45452 471 aa17.65■□□□□ 0.42
PDLIM4-202ENST00000379018 ITKQ08881 620 aa17.65■□□□□ 0.42
PDLIM4-202ENST00000379018 ABHD18Q0P651 414 aa17.65■□□□□ 0.42
PDLIM4-202ENST00000379018 KLRB1Q12918 225 aa17.65■□□□□ 0.42
PDLIM4-202ENST00000379018 DPYSQ14117 519 aa17.65■□□□□ 0.42
PDLIM4-202ENST00000379018 SMTNL2Q2TAL5 461 aa17.65■□□□□ 0.42
PDLIM4-202ENST00000379018 CDKAL1Q5VV42 579 aa17.65■□□□□ 0.42
PDLIM4-202ENST00000379018 ADAMTSL4Q6UY14 1074 aa17.65■□□□□ 0.42
PDLIM4-202ENST00000379018 ARHGAP22Q7Z5H3 698 aa17.65■□□□□ 0.42
PDLIM4-202ENST00000379018 TECPR1Q7Z6L1 1165 aa17.65■□□□□ 0.42
PDLIM4-202ENST00000379018 ATCAYQ86WG3 371 aa17.65■□□□□ 0.42
PDLIM4-202ENST00000379018 LZTR1Q8N653 840 aa17.65■□□□□ 0.42
PDLIM4-202ENST00000379018 NSMCE1Q8WV22 266 aa17.65■□□□□ 0.42
PDLIM4-202ENST00000379018 SCRN2Q96FV2 425 aa17.65■□□□□ 0.42
PDLIM4-202ENST00000379018 MGME1Q9BQP7 344 aa17.65■□□□□ 0.42
PDLIM4-202ENST00000379018 ZWILCHQ9H900 591 aa17.65■□□□□ 0.42
PDLIM4-202ENST00000379018 NT5MQ9NPB1 228 aa17.65■□□□□ 0.42
PDLIM4-202ENST00000379018 PARVAQ9NVD7 372 aa17.65■□□□□ 0.42
PDLIM4-202ENST00000379018 ETNK2Q9NVF9 386 aa17.65■□□□□ 0.42
PDLIM4-202ENST00000379018 PCYT1BQ9Y5K3 369 aaPredicted RBP17.65■□□□□ 0.42
PDLIM4-202ENST00000379018 RPS6KL1Q9Y6S9 549 aa17.65■□□□□ 0.42
PDLIM4-202ENST00000379018 ICE1Q9Y2F5 2266 aa17.65■□□□□ 0.42
PDLIM4-202ENST00000379018 UTP20O75691 2785 aaKnown RBP17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 CLEC18AA5D8T8 446 aa17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 H3BRJ5 948 aa17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 K7EM74 188 aa17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 PDHA1P08559 390 aa17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 KRT7P08729 469 aa17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 ACP5P13686 325 aa17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 STAT5AP42229 794 aa17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 EPHB1P54762 984 aa17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 UBXN1Q04323 297 aa17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 DPTQ07507 201 aa17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 ERV3-1Q14264 604 aa17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 TMCO3Q6UWJ1 677 aa17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 CLEC18BQ6UXF7 455 aa17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 CYP4V2Q6ZWL3 525 aaPredicted RBP17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 CBARPQ8N350 705 aaPredicted RBP17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 TEX19Q8NA77 164 aa17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 CLEC18CQ8NCF0 446 aa17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 ENOX1Q8TC92 643 aaKnown RBP17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 HSPH1Q92598 858 aa17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 MIB2Q96AX9 1013 aa17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 SCARF2Q96GP6 870 aaPredicted RBP17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 ELMO2Q96JJ3 720 aa17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 ZPBPQ9BS86 351 aa17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 RIOK2Q9BVS4 552 aaKnown RBP17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 TBC1D10AQ9BXI6 508 aa17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 ULBP3Q9BZM4 244 aa17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 SPRY4Q9C004 299 aa17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 FANCLQ9NW38 375 aa17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 PDP2Q9P2J9 529 aa17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 CNOT8Q9UFF9 292 aaKnown RBP17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 TBC1D29Q9UFV1 150 aa17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 TEX15Q9BXT5 2789 aa17.64■□□□□ 0.41
PDLIM4-202ENST00000379018 KATNA1O75449 491 aa17.63■□□□□ 0.41
PDLIM4-202ENST00000379018 PEX11BO96011 259 aa17.63■□□□□ 0.41
PDLIM4-202ENST00000379018 F8A1P23610 371 aa17.63■□□□□ 0.41
PDLIM4-202ENST00000379018 DLSTP36957 453 aa17.63■□□□□ 0.41
PDLIM4-202ENST00000379018 ARL4AP40617 200 aa17.63■□□□□ 0.41
PDLIM4-202ENST00000379018 LRP8Q14114 963 aa17.63■□□□□ 0.41
PDLIM4-202ENST00000379018 WDR74Q6RFH5 385 aaPredicted RBP17.63■□□□□ 0.41
PDLIM4-202ENST00000379018 ESX1Q8N693 406 aa17.63■□□□□ 0.41
PDLIM4-202ENST00000379018 SPOCK2Q92563 424 aa17.63■□□□□ 0.41
PDLIM4-202ENST00000379018 PSMG3-AS1Q96PY0 264 aa17.63■□□□□ 0.41
PDLIM4-202ENST00000379018 MCCC1Q96RQ3 725 aaPredicted RBP17.63■□□□□ 0.41
PDLIM4-202ENST00000379018 TRIT1Q9H3H1 467 aaKnown RBP17.63■□□□□ 0.41
PDLIM4-202ENST00000379018 FBXO8Q9NRD0 319 aa17.63■□□□□ 0.41
PDLIM4-202ENST00000379018 TTLL3Q9Y4R7 772 aa17.63■□□□□ 0.41
PDLIM4-202ENST00000379018 TMEM184BQ9Y519 407 aaPredicted RBP17.63■□□□□ 0.41
PDLIM4-202ENST00000379018 PCDHB3Q9Y5E6 796 aa17.63■□□□□ 0.41
PDLIM4-202ENST00000379018 USP9XQ93008 2570 aaPredicted RBP17.62■□□□□ 0.41
PDLIM4-202ENST00000379018 DLGAP3O95886 979 aa17.62■□□□□ 0.41
PDLIM4-202ENST00000379018 FERP16591 822 aa17.62■□□□□ 0.41
PDLIM4-202ENST00000379018 ZNF28P17035 718 aa17.62■□□□□ 0.41
PDLIM4-202ENST00000379018 UQCRFS1P47985 274 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms