RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 POLG2Q9UHN1 485 aa25.22■■□□□ 1.63
C9orf40-201ENST00000376854 BTRCQ9Y297 605 aa25.22■■□□□ 1.63
C9orf40-201ENST00000376854 AQP12BA6NM10 295 aa25.21■■□□□ 1.63
C9orf40-201ENST00000376854 FAM155AB1AL88 458 aaPredicted RBP25.21■■□□□ 1.63
C9orf40-201ENST00000376854 PLOD2O00469 737 aa25.21■■□□□ 1.63
C9orf40-201ENST00000376854 TMCC1O94876 653 aa25.21■■□□□ 1.63
C9orf40-201ENST00000376854 FLT3LGP49771 235 aa25.21■■□□□ 1.63
C9orf40-201ENST00000376854 STC1P52823 247 aa25.21■■□□□ 1.63
C9orf40-201ENST00000376854 RPS6KA2Q15349 733 aa25.21■■□□□ 1.63
C9orf40-201ENST00000376854 TRIP4Q15650 581 aaPredicted RBP25.21■■□□□ 1.63
C9orf40-201ENST00000376854 AQP12AQ8IXF9 295 aa25.21■■□□□ 1.63
C9orf40-201ENST00000376854 FUBP3Q96I24 572 aaKnown RBP eCLIP25.21■■□□□ 1.63
C9orf40-201ENST00000376854 ZIC5Q96T25 663 aa25.21■■□□□ 1.63
C9orf40-201ENST00000376854 SDR39U1Q9NRG7 319 aaPredicted RBP25.21■■□□□ 1.63
C9orf40-201ENST00000376854 SAC3D1A6NKF1 404 aa25.21■■□□□ 1.63
C9orf40-201ENST00000376854 DRGXA6NNA5 263 aa25.21■■□□□ 1.63
C9orf40-201ENST00000376854 SEPT4O43236 478 aa25.21■■□□□ 1.63
C9orf40-201ENST00000376854 OAZ2O95190 189 aa25.21■■□□□ 1.63
C9orf40-201ENST00000376854 OGNP20774 298 aaKnown RBP25.21■■□□□ 1.63
C9orf40-201ENST00000376854 SLC5A2P31639 672 aa25.21■■□□□ 1.63
C9orf40-201ENST00000376854 NFE2Q16621 373 aaPredicted RBP25.21■■□□□ 1.63
C9orf40-201ENST00000376854 SAPCD2Q86UD0 394 aa25.21■■□□□ 1.63
C9orf40-201ENST00000376854 ZNF598Q86UK7 904 aaKnown RBP25.21■■□□□ 1.63
C9orf40-201ENST00000376854 GRIN3AQ8TCU5 1115 aa25.21■■□□□ 1.63
C9orf40-201ENST00000376854 GID8Q9NWU2 228 aa25.21■■□□□ 1.63
C9orf40-201ENST00000376854 CMTM6Q9NX76 183 aa25.21■■□□□ 1.63
C9orf40-201ENST00000376854 DHRS12A0PJE2 317 aa25.2■■□□□ 1.63
C9orf40-201ENST00000376854 SUPT3HB4E1H0 165 aa25.2■■□□□ 1.63
C9orf40-201ENST00000376854 FXYD1O00168 92 aa25.2■■□□□ 1.63
C9orf40-201ENST00000376854 HNRNPRO43390 633 aaKnown RBP25.2■■□□□ 1.63
C9orf40-201ENST00000376854 SUPT3HO75486 399 aa25.2■■□□□ 1.63
C9orf40-201ENST00000376854 MATN4O95460 622 aa25.2■■□□□ 1.63
C9orf40-201ENST00000376854 PRSS56P0CW18 603 aa25.2■■□□□ 1.63
C9orf40-201ENST00000376854 HSD17B1P14061 328 aa25.2■■□□□ 1.63
C9orf40-201ENST00000376854 PCSK6P29122 969 aa25.2■■□□□ 1.63
C9orf40-201ENST00000376854 EEF1DP29692 281 aaKnown RBP25.2■■□□□ 1.63
C9orf40-201ENST00000376854 CCND3P30281 292 aaPredicted RBP25.2■■□□□ 1.63
C9orf40-201ENST00000376854 INPP5AQ14642 412 aa25.2■■□□□ 1.63
C9orf40-201ENST00000376854 TBRG4Q969Z0 631 aaKnown RBP eCLIP25.2■■□□□ 1.63
C9orf40-201ENST00000376854 MARCH2Q9P0N8 246 aa25.2■■□□□ 1.63
C9orf40-201ENST00000376854 DOCK4Q8N1I0 1966 aa25.2■■□□□ 1.62
C9orf40-201ENST00000376854 PRAMEF11O60813 436 aa25.2■■□□□ 1.62
C9orf40-201ENST00000376854 EPOP01588 193 aa25.2■■□□□ 1.62
C9orf40-201ENST00000376854 CLCQ05315 142 aa25.2■■□□□ 1.62
C9orf40-201ENST00000376854 BNIP2Q12982 314 aa25.2■■□□□ 1.62
C9orf40-201ENST00000376854 TTC9BQ8N6N2 239 aa25.2■■□□□ 1.62
C9orf40-201ENST00000376854 TFAP2CQ92754 450 aa25.2■■□□□ 1.62
C9orf40-201ENST00000376854 RNF112Q9ULX5 631 aa25.2■■□□□ 1.62
C9orf40-201ENST00000376854 A0A1B0GTL3 188 aa25.19■■□□□ 1.62
C9orf40-201ENST00000376854 UBA6A0AVT1 1052 aaPredicted RBP25.19■■□□□ 1.62
C9orf40-201ENST00000376854 KERAO60938 352 aa25.19■■□□□ 1.62
C9orf40-201ENST00000376854 CHRM3P20309 590 aa25.19■■□□□ 1.62
C9orf40-201ENST00000376854 SLC6A2P23975 617 aa25.19■■□□□ 1.62
C9orf40-201ENST00000376854 PLOD1Q02809 727 aaPredicted RBP25.19■■□□□ 1.62
C9orf40-201ENST00000376854 LCP2Q13094 533 aa25.19■■□□□ 1.62
C9orf40-201ENST00000376854 PABPC1LQ4VXU2 614 aaKnown RBP25.19■■□□□ 1.62
C9orf40-201ENST00000376854 C10orf120Q5SQS8 335 aa25.19■■□□□ 1.62
C9orf40-201ENST00000376854 FBXO39Q8N4B4 442 aa25.19■■□□□ 1.62
C9orf40-201ENST00000376854 FAM47BQ8NA70 645 aa25.19■■□□□ 1.62
C9orf40-201ENST00000376854 STAG3L4Q8TBR4 150 aa25.19■■□□□ 1.62
C9orf40-201ENST00000376854 DIS3LQ8TF46 1054 aaKnown RBP25.19■■□□□ 1.62
C9orf40-201ENST00000376854 FBXO32Q969P5 355 aa25.19■■□□□ 1.62
C9orf40-201ENST00000376854 KIAA1191Q96A73 305 aa25.19■■□□□ 1.62
C9orf40-201ENST00000376854 LRRC58Q96CX6 371 aa25.19■■□□□ 1.62
C9orf40-201ENST00000376854 SEMA4BQ9NPR2 832 aaPredicted RBP25.19■■□□□ 1.62
C9orf40-201ENST00000376854 SLC12A8A0AV02 714 aa25.19■■□□□ 1.62
C9orf40-201ENST00000376854 RHOBTB1O94844 696 aa25.19■■□□□ 1.62
C9orf40-201ENST00000376854 IDO1P14902 403 aa25.19■■□□□ 1.62
C9orf40-201ENST00000376854 IL10P22301 178 aa25.19■■□□□ 1.62
C9orf40-201ENST00000376854 ALDH3B2P48448 385 aa25.19■■□□□ 1.62
C9orf40-201ENST00000376854 TYSND1Q2T9J0 566 aa25.19■■□□□ 1.62
C9orf40-201ENST00000376854 CBR4Q8N4T8 237 aa25.19■■□□□ 1.62
C9orf40-201ENST00000376854 MYEOVQ96EZ4 313 aa25.19■■□□□ 1.62
C9orf40-201ENST00000376854 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.19■■□□□ 1.62
C9orf40-201ENST00000376854 FAM50BQ9Y247 325 aa25.19■■□□□ 1.62
C9orf40-201ENST00000376854 PCDHB5Q9Y5E4 795 aa25.19■■□□□ 1.62
C9orf40-201ENST00000376854 CRCPO75575 148 aa25.18■■□□□ 1.62
C9orf40-201ENST00000376854 PSMA4P25789 261 aaKnown RBP25.18■■□□□ 1.62
C9orf40-201ENST00000376854 YBEYP58557 167 aaPredicted RBP25.18■■□□□ 1.62
C9orf40-201ENST00000376854 YBX1P67809 324 aaKnown RBP25.18■■□□□ 1.62
C9orf40-201ENST00000376854 FBXO48Q5FWF7 155 aa25.18■■□□□ 1.62
C9orf40-201ENST00000376854 LCN8Q6JVE9 175 aa25.18■■□□□ 1.62
C9orf40-201ENST00000376854 PAQR3Q6TCH7 311 aa25.18■■□□□ 1.62
C9orf40-201ENST00000376854 CAMK1DQ8IU85 385 aa25.18■■□□□ 1.62
C9orf40-201ENST00000376854 FIBCD1Q8N539 461 aa25.18■■□□□ 1.62
C9orf40-201ENST00000376854 PACRGLQ8N7B6 248 aa25.18■■□□□ 1.62
C9orf40-201ENST00000376854 ATAD1Q8NBU5 361 aa25.18■■□□□ 1.62
C9orf40-201ENST00000376854 KLHDC9Q8NEP7 349 aa25.18■■□□□ 1.62
C9orf40-201ENST00000376854 B4GALNT2Q8NHY0 566 aa25.18■■□□□ 1.62
C9orf40-201ENST00000376854 EZH1Q92800 747 aaPredicted RBP25.18■■□□□ 1.62
C9orf40-201ENST00000376854 TMIGD2Q96BF3 282 aa25.18■■□□□ 1.62
C9orf40-201ENST00000376854 CDKN2AIPNLQ96HQ2 116 aa25.18■■□□□ 1.62
C9orf40-201ENST00000376854 CLK4Q9HAZ1 481 aaKnown RBP25.18■■□□□ 1.62
C9orf40-201ENST00000376854 SYTL2Q9HCH5 934 aa25.18■■□□□ 1.62
C9orf40-201ENST00000376854 ACTR3BQ9P1U1 418 aa25.18■■□□□ 1.62
C9orf40-201ENST00000376854 RSL24D1Q9UHA3 163 aaKnown RBP25.18■■□□□ 1.62
C9orf40-201ENST00000376854 TMCO1Q9UM00 188 aa25.18■■□□□ 1.62
C9orf40-201ENST00000376854 FAM149AA5PLN7 773 aa25.18■■□□□ 1.62
C9orf40-201ENST00000376854 PDLIM1O00151 329 aa25.18■■□□□ 1.62
C9orf40-201ENST00000376854 TRMUO75648 421 aaKnown RBP25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms