RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 PTPRCAPQ14761 206 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 OR14C36Q8NHC7 312 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 KLK6Q92876 244 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 NR1H4Q96RI1 486 aaPredicted RBP17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 NDOR1Q9UHB4 597 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 A0A0D9SEW6 157 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 PIK3R1P27986 724 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 MAT2AP31153 395 aaKnown RBP17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 SLC16A1P53985 500 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 CLDN10P78369 228 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 KCNJ11Q14654 390 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 C2orf27AQ580R0 203 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 ZC3H12BQ5HYM0 836 aaKnown RBP17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 PPP2R2DQ66LE6 453 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 CERS6Q6ZMG9 384 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 GCNT7Q6ZNI0 430 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 GRASPQ7Z6J2 395 aaPredicted RBP17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 IGDCC3Q8IVU1 814 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 ZNF781Q8N8C0 355 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 GDPD5Q8WTR4 605 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 THAP11Q96EK4 314 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 NPAS2Q99743 824 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 MYH15Q9Y2K3 1946 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 TOGARAM1Q9Y4F4 1720 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 ISM1B1AKI9 464 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 SLC7A4O43246 635 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 KRT36O76013 467 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 IRF9Q00978 393 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 PAGE2BQ5JRK9 111 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 SLC22A17Q8WUG5 538 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 HEPHQ9BQS7 1158 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 ZNF395Q9H8N7 513 aaPredicted RBP17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 EGFL7Q9UHF1 273 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 SORCS3Q9UPU3 1222 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 SEC13P55735 322 aa17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 KLF1Q13351 362 aaPredicted RBP17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 MSANTD2Q6P1R3 559 aa17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 YTHDF3Q7Z739 585 aaKnown RBP17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 LRRTM3Q86VH5 581 aa17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 TTC9BQ8N6N2 239 aa17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 CYB5D2Q8WUJ1 264 aa17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 TMEM175Q9BSA9 504 aa17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 EIF2B3Q9NR50 452 aaKnown RBP17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 COMMD8Q9NX08 183 aa17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 TBC1D30Q9Y2I9 924 aa17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 INSL5Q9Y5Q6 135 aa17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 ZBTB42B2RXF5 422 aa17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 UBXN11Q5T124 520 aa17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 CXorf40BQ96DE9 158 aa17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 TMLHEQ9NVH6 421 aa17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 NWD2Q9ULI1 1742 aa17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 ENO4A6NNW6 628 aa17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 H3BM21 787 aa17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 SLC31A1O15431 190 aa17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 MTX2O75431 263 aa17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 TOP3BO95985 862 aaKnown RBP17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 APODP05090 189 aa17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 HCAR3P49019 387 aa17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 NRF1Q16656 503 aa17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 FAM98BQ52LJ0 330 aaKnown RBP17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 RAD18Q9NS91 495 aa17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 VPS51Q9UID3 782 aa17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 ZNF839A8K0R7 811 aa17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 COL6A2P12110 1019 aa17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 MRPS35P82673 323 aaKnown RBP17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 CACNG1Q06432 222 aa17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 SIDT2Q8NBJ9 832 aaKnown RBP17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 POF1BQ8WVV4 589 aa17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 POLR3BQ9NW08 1133 aaPredicted RBP17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 ASB3Q9Y575 518 aa17.9■□□□□ 0.46
PTPDC1-202ENST00000375360 SCN9AQ15858 1988 aa17.89■□□□□ 0.46
PTPDC1-202ENST00000375360 PTPRZ1P23471 2315 aaPredicted RBP17.89■□□□□ 0.45
PTPDC1-202ENST00000375360 RPIAP49247 311 aa17.89■□□□□ 0.45
PTPDC1-202ENST00000375360 TGM3Q08188 693 aa17.89■□□□□ 0.45
PTPDC1-202ENST00000375360 NAE1Q13564 534 aa17.89■□□□□ 0.45
PTPDC1-202ENST00000375360 PAFAH1B3Q15102 231 aaKnown RBP17.89■□□□□ 0.45
PTPDC1-202ENST00000375360 LYPLAL1Q5VWZ2 237 aa17.89■□□□□ 0.45
PTPDC1-202ENST00000375360 CFAP206Q8IYR0 622 aa17.89■□□□□ 0.45
PTPDC1-202ENST00000375360 CLPTM1LQ96KA5 538 aa17.89■□□□□ 0.45
PTPDC1-202ENST00000375360 MFSD1Q9H3U5 465 aa17.89■□□□□ 0.45
PTPDC1-202ENST00000375360 TEX264Q9Y6I9 313 aa17.89■□□□□ 0.45
PTPDC1-202ENST00000375360 FGF19O95750 216 aa17.89■□□□□ 0.45
PTPDC1-202ENST00000375360 SOD2P04179 222 aa17.89■□□□□ 0.45
PTPDC1-202ENST00000375360 PABPC1P11940 636 aaKnown RBP17.89■□□□□ 0.45
PTPDC1-202ENST00000375360 ZNF252P-AS1Q0IIN9 211 aa17.89■□□□□ 0.45
PTPDC1-202ENST00000375360 PEX6Q13608 980 aa17.89■□□□□ 0.45
PTPDC1-202ENST00000375360 KIAA0930Q6ICG6 404 aaPredicted RBP17.89■□□□□ 0.45
PTPDC1-202ENST00000375360 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.89■□□□□ 0.45
PTPDC1-202ENST00000375360 LRRC74BQ6ZQY2 392 aa17.89■□□□□ 0.45
PTPDC1-202ENST00000375360 VPS33AQ96AX1 596 aa17.89■□□□□ 0.45
PTPDC1-202ENST00000375360 CDKN2AIPNLQ96HQ2 116 aa17.89■□□□□ 0.45
PTPDC1-202ENST00000375360 RERGLQ9H628 205 aa17.89■□□□□ 0.45
PTPDC1-202ENST00000375360 TMCC3Q9ULS5 477 aa17.89■□□□□ 0.45
PTPDC1-202ENST00000375360 RBM47A0AV96 593 aaKnown RBP17.89■□□□□ 0.45
PTPDC1-202ENST00000375360 SLC10A2Q12908 348 aaPredicted RBP17.89■□□□□ 0.45
PTPDC1-202ENST00000375360 Q6ZVU0 165 aa17.89■□□□□ 0.45
PTPDC1-202ENST00000375360 B4GALNT2Q8NHY0 566 aa17.89■□□□□ 0.45
PTPDC1-202ENST00000375360 RIN3Q8TB24 985 aa17.89■□□□□ 0.45
PTPDC1-202ENST00000375360 PPP3R2Q96LZ3 170 aa17.89■□□□□ 0.45
PTPDC1-202ENST00000375360 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms