RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 NDST3O95803 873 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 CTPS1P17812 591 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 CYP2A13Q16696 494 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 IL23RQ5VWK5 629 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 ATG14Q6ZNE5 492 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 FRMD7Q6ZUT3 714 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 MTSS1LQ765P7 747 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 TRAPPC5Q8IUR0 188 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 PGBD3Q8N328 593 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 CLEC4CQ8WTT0 213 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 DDX1Q92499 740 aaKnown RBP11.51□□□□□ -0.57
PTCH1-203ENST00000375274 BTN2A3PQ96KV6 586 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 OR52B2Q96RD2 323 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 TWNKQ96RR1 684 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 ATP13A3Q9H7F0 1226 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 ZNF214Q9UL59 606 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-203ENST00000375274 FZD10Q9ULW2 581 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 SLC27A5Q9Y2P5 690 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 TDRKHQ9Y2W6 561 aaKnown RBP11.51□□□□□ -0.57
PTCH1-203ENST00000375274 ABCC6O95255 1503 aa11.51□□□□□ -0.57
PTCH1-203ENST00000375274 SGTAO43765 313 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 ITGAXP20702 1163 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 CES1P23141 567 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 POU5F1Q01860 360 aaKnown RBP11.5□□□□□ -0.57
PTCH1-203ENST00000375274 DSC2Q02487 901 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 SFSWAPQ12872 951 aaKnown RBP11.5□□□□□ -0.57
PTCH1-203ENST00000375274 TUSC3Q13454 348 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 ACOX1Q15067 660 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 MRPL48Q96GC5 212 aaKnown RBP11.5□□□□□ -0.57
PTCH1-203ENST00000375274 RBM4BQ9BQ04 359 aaKnown RBP11.5□□□□□ -0.57
PTCH1-203ENST00000375274 RBM4Q9BWF3 364 aaKnown RBP11.5□□□□□ -0.57
PTCH1-203ENST00000375274 C1orf21Q9H246 121 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 ELOVL7A1L3X0 281 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 SUV39H1O43463 412 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 TMCC2O75069 709 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 ALDH1A2O94788 518 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 FTH1P02794 183 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 CD52P31358 61 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 YBEYP58557 167 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-203ENST00000375274 DAOAP59103 153 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 SNRPD1P62314 119 aaKnown RBP11.5□□□□□ -0.57
PTCH1-203ENST00000375274 SLC25A11Q02978 314 aaKnown RBP11.5□□□□□ -0.57
PTCH1-203ENST00000375274 USP39Q53GS9 565 aaKnown RBP11.5□□□□□ -0.57
PTCH1-203ENST00000375274 LDLRAP1Q5SW96 308 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 TSTD2Q5T7W7 516 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 ARMC6Q6NXE6 501 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 GALNT18Q6P9A2 607 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 DET1Q7L5Y6 550 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 COX4I2Q96KJ9 171 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 HBEGFQ99075 208 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 OLFM1Q99784 485 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 COQ7Q99807 217 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 MTIF3Q9H2K0 278 aaKnown RBP11.5□□□□□ -0.57
PTCH1-203ENST00000375274 RASSF1Q9NS23 344 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 OXSMQ9NWU1 459 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 TRNAU1APQ9NX07 287 aaKnown RBP11.5□□□□□ -0.57
PTCH1-203ENST00000375274 RAPGEFL1Q9UHV5 662 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 DGKBQ9Y6T7 804 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 LTN1O94822 1766 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 ANKDD1BA6NHY2 528 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 KPNA5O15131 536 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 ANGPTL1O95841 491 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 EIF2S1P05198 315 aaKnown RBP11.5□□□□□ -0.57
PTCH1-203ENST00000375274 RHOQP17081 205 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 NR4A1P22736 598 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 LMO2P25791 158 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 SLC7A1P30825 629 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 SLC26A3P40879 764 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 GLUD2P49448 558 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 DLG1Q12959 904 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 HNRNPDQ14103 355 aaKnown RBP11.5□□□□□ -0.57
PTCH1-203ENST00000375274 MED22Q15528 200 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 TMEM214Q6NUQ4 689 aaKnown RBP11.5□□□□□ -0.57
PTCH1-203ENST00000375274 AHI1Q8N157 1196 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 ARL10Q8N8L6 244 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 GPR156Q8NFN8 814 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 STYXQ8WUJ0 223 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 Q96MT0 163 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 CORO2BQ9UQ03 480 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 ZNF541Q9H0D2 1346 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 SLIT2O94813 1529 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 YJEFN3A6XGL0 299 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 E9PAM4 449 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 PIP5K1BO14986 540 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 PEX10O60683 326 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 STX11O75558 287 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 DLDP09622 509 aaKnown RBP11.5□□□□□ -0.57
PTCH1-203ENST00000375274 CKBP12277 381 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 PFKPQ01813 784 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 NADK2Q4G0N4 442 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 PABPC1LQ4VXU2 614 aaKnown RBP11.5□□□□□ -0.57
PTCH1-203ENST00000375274 SETMARQ53H47 684 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-203ENST00000375274 XKR6Q5GH73 641 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 FAM151BQ6UXP7 276 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 DEFB128Q7Z7B8 93 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 CFAP52Q8N1V2 620 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 TRPM4Q8TD43 1214 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 MAF1Q9H063 256 aa11.5□□□□□ -0.57
PTCH1-203ENST00000375274 CLEC4MQ9H2X3 399 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-203ENST00000375274 UBAP1Q9NZ09 502 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms