RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 CORO1AP31146 461 aaKnown RBP15.52■□□□□ 0.08
CCDC40-202ENST00000374876 SERPINB5P36952 375 aa15.52■□□□□ 0.08
CCDC40-202ENST00000374876 ETFBP38117 255 aa15.52■□□□□ 0.08
CCDC40-202ENST00000374876 LEPRP48357 1165 aaKnown RBP15.52■□□□□ 0.08
CCDC40-202ENST00000374876 CLCN5P51795 746 aa15.52■□□□□ 0.08
CCDC40-202ENST00000374876 IL10RBQ08334 325 aa15.52■□□□□ 0.08
CCDC40-202ENST00000374876 PEX6Q13608 980 aa15.52■□□□□ 0.08
CCDC40-202ENST00000374876 RUNX3Q13761 415 aa15.52■□□□□ 0.08
CCDC40-202ENST00000374876 CSHL1Q14406 222 aa15.52■□□□□ 0.08
CCDC40-202ENST00000374876 LSM12Q3MHD2 195 aaKnown RBP15.52■□□□□ 0.08
CCDC40-202ENST00000374876 PARP15Q460N3 678 aa15.52■□□□□ 0.08
CCDC40-202ENST00000374876 RBM20Q5T481 1227 aaKnown RBP15.52■□□□□ 0.08
CCDC40-202ENST00000374876 ACBD5Q5T8D3 534 aaPredicted RBP15.52■□□□□ 0.08
CCDC40-202ENST00000374876 CIR1Q86X95 450 aaPredicted RBP15.52■□□□□ 0.08
CCDC40-202ENST00000374876 TEX26Q8N6G2 289 aa15.52■□□□□ 0.08
CCDC40-202ENST00000374876 OR6P1Q8NGX9 317 aa15.52■□□□□ 0.08
CCDC40-202ENST00000374876 CSGALNACT1Q8TDX6 532 aa15.52■□□□□ 0.08
CCDC40-202ENST00000374876 SGF29Q96ES7 293 aa15.52■□□□□ 0.08
CCDC40-202ENST00000374876 TSPAN17Q96FV3 270 aa15.52■□□□□ 0.08
CCDC40-202ENST00000374876 RTKNQ9BST9 563 aa15.52■□□□□ 0.08
CCDC40-202ENST00000374876 GEMIN8Q9NWZ8 242 aaKnown RBP15.52■□□□□ 0.08
CCDC40-202ENST00000374876 NDE1Q9NXR1 346 aa15.52■□□□□ 0.08
CCDC40-202ENST00000374876 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.52■□□□□ 0.08
CCDC40-202ENST00000374876 TICRRQ7Z2Z1 1910 aa15.52■□□□□ 0.07
CCDC40-202ENST00000374876 TTC24A2A3L6 582 aaPredicted RBP15.51■□□□□ 0.07
CCDC40-202ENST00000374876 DRGXA6NNA5 263 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 LIN7AO14910 233 aaPredicted RBP15.51■□□□□ 0.07
CCDC40-202ENST00000374876 NPHS1O60500 1241 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 PDE5AO76074 875 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 THRAP10827 490 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 CD72P21854 359 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 ATP5F1P24539 256 aaPredicted RBP15.51■□□□□ 0.07
CCDC40-202ENST00000374876 OR1E1P30953 314 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 PFKPQ01813 784 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 SIGLEC14Q08ET2 396 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 SIRPB2Q5JXA9 342 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 TMCO4Q5TGY1 634 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 AGAP9Q5VTM2 703 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 KLC3Q6P597 504 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 TRIM67Q6ZTA4 783 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 PIWIL4Q7Z3Z4 852 aaKnown RBP15.51■□□□□ 0.07
CCDC40-202ENST00000374876 PTAR1Q7Z6K3 402 aaPredicted RBP15.51■□□□□ 0.07
CCDC40-202ENST00000374876 LSMEM2Q8N112 164 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 SIX5Q8N196 739 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 OR13J1Q8NGT2 312 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 CNDP1Q96KN2 507 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 LENG8Q96PV6 779 aaPredicted RBP15.51■□□□□ 0.07
CCDC40-202ENST00000374876 WNT16Q9UBV4 365 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 LSM7Q9UK45 103 aaKnown RBP15.51■□□□□ 0.07
CCDC40-202ENST00000374876 AGO1Q9UL18 857 aaKnown RBP15.51■□□□□ 0.07
CCDC40-202ENST00000374876 MYOFQ9NZM1 2061 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 SLC7A4O43246 635 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 SNUPNO95149 360 aaKnown RBP15.51■□□□□ 0.07
CCDC40-202ENST00000374876 BAG2O95816 211 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 PDGFBP01127 241 aaPredicted RBP15.51■□□□□ 0.07
CCDC40-202ENST00000374876 ABL2P42684 1182 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 KPNA1P52294 538 aaPredicted RBP15.51■□□□□ 0.07
CCDC40-202ENST00000374876 PRAMEP78395 509 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 BTKQ06187 659 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 TBL3Q12788 808 aaKnown RBP15.51■□□□□ 0.07
CCDC40-202ENST00000374876 SERINC3Q13530 473 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 BLMHQ13867 455 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 LBRQ14739 615 aaKnown RBP15.51■□□□□ 0.07
CCDC40-202ENST00000374876 PDGFRLQ15198 375 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 ZNF789Q5FWF6 425 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 NXNQ6DKJ4 435 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 PGM2L1Q6PCE3 622 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 Q6ZNB5 142 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 TXNDC5Q8NBS9 432 aaKnown RBP15.51■□□□□ 0.07
CCDC40-202ENST00000374876 TTC1Q99614 292 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 OLFM1Q99784 485 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 OSBPL1AQ9BXW6 950 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 IGSF5Q9NSI5 407 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 TBC1D14Q9P2M4 693 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 G3BP2Q9UN86 482 aaKnown RBP15.51■□□□□ 0.07
CCDC40-202ENST00000374876 KIF26AQ9ULI4 1882 aaPredicted RBP15.51■□□□□ 0.07
CCDC40-202ENST00000374876 TECTAO75443 2155 aa15.51■□□□□ 0.07
CCDC40-202ENST00000374876 MROH6A6NGR9 719 aa15.5■□□□□ 0.07
CCDC40-202ENST00000374876 IGLV3-27P01718 113 aa15.5■□□□□ 0.07
CCDC40-202ENST00000374876 PIK3R1P27986 724 aa15.5■□□□□ 0.07
CCDC40-202ENST00000374876 PPARGP37231 505 aaPredicted RBP15.5■□□□□ 0.07
CCDC40-202ENST00000374876 DNAJB13P59910 316 aa15.5■□□□□ 0.07
CCDC40-202ENST00000374876 RING1Q06587 406 aa15.5■□□□□ 0.07
CCDC40-202ENST00000374876 PDCD2Q16342 344 aaPredicted RBP15.5■□□□□ 0.07
CCDC40-202ENST00000374876 AAGABQ6PD74 315 aa15.5■□□□□ 0.07
CCDC40-202ENST00000374876 TPGS1Q6ZTW0 290 aa15.5■□□□□ 0.07
CCDC40-202ENST00000374876 CILP2Q8IUL8 1156 aa15.5■□□□□ 0.07
CCDC40-202ENST00000374876 PGBD5Q8N414 524 aa15.5■□□□□ 0.07
CCDC40-202ENST00000374876 ARRDC2Q8TBH0 407 aa15.5■□□□□ 0.07
CCDC40-202ENST00000374876 STON2Q8WXE9 905 aa15.5■□□□□ 0.07
CCDC40-202ENST00000374876 DNASE1L2Q92874 299 aa15.5■□□□□ 0.07
CCDC40-202ENST00000374876 PLD4Q96BZ4 506 aa15.5■□□□□ 0.07
CCDC40-202ENST00000374876 CCDC124Q96CT7 223 aaKnown RBP15.5■□□□□ 0.07
CCDC40-202ENST00000374876 CCDC126Q96EE4 140 aa15.5■□□□□ 0.07
CCDC40-202ENST00000374876 IFT43Q96FT9 208 aa15.5■□□□□ 0.07
CCDC40-202ENST00000374876 CCDC28BQ9BUN5 200 aa15.5■□□□□ 0.07
CCDC40-202ENST00000374876 POLR1EQ9GZS1 481 aaKnown RBP15.5■□□□□ 0.07
CCDC40-202ENST00000374876 TRPV5Q9NQA5 729 aa15.5■□□□□ 0.07
CCDC40-202ENST00000374876 LRCH1Q9Y2L9 728 aa15.5■□□□□ 0.07
CCDC40-202ENST00000374876 RGSL1A5PLK6 1076 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms