RNA–Protein interactions for RNA: ENST00000372837.3

CHCHD1-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

TSL 2 BASIC

Gene CHCHD1, Length 1,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-202ENST00000372837 ROPN1LQ96C74 230 aa12.88□□□□□ -0.35
CHCHD1-202ENST00000372837 CCDC124Q96CT7 223 aaKnown RBP12.88□□□□□ -0.35
CHCHD1-202ENST00000372837 CERS2Q96G23 380 aa12.88□□□□□ -0.35
CHCHD1-202ENST00000372837 SLC45A3Q96JT2 553 aa12.88□□□□□ -0.35
CHCHD1-202ENST00000372837 CNBD2Q96M20 576 aa12.88□□□□□ -0.35
CHCHD1-202ENST00000372837 CSPG4P5Q96PW8 444 aa12.88□□□□□ -0.35
CHCHD1-202ENST00000372837 RANBP9Q96S59 729 aa12.88□□□□□ -0.35
CHCHD1-202ENST00000372837 HNRNPABQ99729 332 aaKnown RBP12.88□□□□□ -0.35
CHCHD1-202ENST00000372837 DHX35Q9H5Z1 703 aaKnown RBP12.88□□□□□ -0.35
CHCHD1-202ENST00000372837 ZNF395Q9H8N7 513 aaPredicted RBP12.88□□□□□ -0.35
CHCHD1-202ENST00000372837 CYP4F11Q9HBI6 524 aa12.88□□□□□ -0.35
CHCHD1-202ENST00000372837 NMRAL1Q9HBL8 299 aa12.88□□□□□ -0.35
CHCHD1-202ENST00000372837 TRPC7Q9HCX4 862 aa12.88□□□□□ -0.35
CHCHD1-202ENST00000372837 FAM105AQ9NUU6 356 aa12.88□□□□□ -0.35
CHCHD1-202ENST00000372837 TMEM216Q9P0N5 145 aa12.88□□□□□ -0.35
CHCHD1-202ENST00000372837 PCDHGA5Q9Y5G8 931 aa12.88□□□□□ -0.35
CHCHD1-202ENST00000372837 FADS3Q9Y5Q0 445 aa12.88□□□□□ -0.35
CHCHD1-202ENST00000372837 ZNF462Q96JM2 2506 aa12.88□□□□□ -0.35
CHCHD1-202ENST00000372837 CFAP46Q8IYW2 2715 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 G3V2L1 256 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 H3BSA7 217 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 CCL16O15467 120 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 SNAP91O60641 907 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 ZNF623O75123 536 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 E2F6O75461 281 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 POMCP01189 267 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 JUNBP17275 347 aaPredicted RBP12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 RPL17P18621 184 aaKnown RBP12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 MYF6P23409 242 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 DCKP27707 260 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 MATKP42679 507 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 THOP1P52888 689 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 ZNF33AQ06730 810 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 USP4Q13107 963 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 SQLEQ14534 574 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 SLC25A52Q3SY17 297 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 PPP6R3Q5H9R7 873 aaPredicted RBP12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 COQ5Q5HYK3 327 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 TCHHL1Q5QJ38 904 aaPredicted RBP12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 C9orf57Q5W0N0 161 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 AGMOQ6ZNB7 445 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 PIWIL4Q7Z3Z4 852 aaKnown RBP12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 SNX32Q86XE0 403 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 LZTR1Q8N653 840 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 TOP6BLQ8N6T0 577 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 DDHD1Q8NEL9 900 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 URGCPQ8TCY9 931 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 TSPEARQ8WU66 669 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 TRUB1Q8WWH5 349 aaKnown RBP12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 TFAP2CQ92754 450 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 FAM193BQ96PV7 902 aaPredicted RBP12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 VAT1Q99536 393 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 PKP2Q99959 881 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 MRPL45Q9BRJ2 306 aaKnown RBP12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 MCMBPQ9BTE3 642 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 SNX15Q9NRS6 342 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 OLAHQ9NV23 265 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 DDX18Q9NVP1 670 aaKnown RBP12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 FNIP2Q9P278 1114 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 SPTA1P02549 2419 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 APC2O95996 2303 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 ACACAQ13085 2346 aa12.87□□□□□ -0.35
CHCHD1-202ENST00000372837 TICRRQ7Z2Z1 1910 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 LOC100653049A0A140TA62 436 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 ATP6V1G1O75348 118 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 LYPLA1O75608 230 aaPredicted RBP12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 GRAP2O75791 330 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 KRT34O76011 436 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 METTL18O95568 372 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 PRB1P04280 392 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 HNRNPA1P09651 372 aaKnown RBP eCLIP12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 KCNE1P15382 129 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 HOXB6P17509 224 aaKnown RBP12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 TFEBP19484 476 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 WARSP23381 471 aaKnown RBP12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 HOXA6P31267 233 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 GNL1P36915 607 aaPredicted RBP12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 TAF6P49848 677 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 TKTL1P51854 596 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 TMBIM6P55061 237 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 NSUN2Q08J23 767 aaKnown RBP eCLIP12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 C19orf57Q0VDD7 668 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 BNIP2Q12982 314 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 CEACAM7Q14002 265 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 CCDC92Q53HC0 331 aaPredicted RBP12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 NCBP2-AS2Q69YL0 99 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 NIPAL1Q6NVV3 410 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 IYDQ6PHW0 289 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 ALKAL1Q6UXT8 129 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 Q6ZS52 159 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 ZCCHC23Q6ZST2 131 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 LILRA2Q8N149 483 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 TAB3Q8N5C8 712 aaPredicted RBP12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 APPL2Q8NEU8 664 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 BHLHE22Q8NFJ8 381 aaPredicted RBP12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 CHPT1Q8WUD6 406 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 KCTD13Q8WZ19 329 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 EFHD2Q96C19 240 aaPredicted RBP12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 HOPXQ9BPY8 73 aaPredicted RBP12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 TRMOQ9BU70 441 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms