RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 ELP6Q0PNE2 266 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 IL18R1Q13478 541 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 KCNA10Q16322 511 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 TBC1D3GQ6DHY5 549 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 TBC1D3CQ6IPX1 549 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 ZNF662Q6ZS27 426 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 TBC1D3Q8IZP1 549 aaPredicted RBP11.5□□□□□ -0.57
VCL-202ENST00000372755 GJD3Q8N144 294 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 ZBTB2Q8N680 514 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 BHLHE41Q9C0J9 482 aaPredicted RBP11.5□□□□□ -0.57
VCL-202ENST00000372755 A0A0J9YYE9 177 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 TCRBV9S1A1TA0A576 114 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 LOC110117498-PIK3R3F6TDL0 507 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 PAPSS1O43252 624 aaPredicted RBP11.5□□□□□ -0.57
VCL-202ENST00000372755 WFS1O76024 890 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 CASP5P51878 434 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 LRRN4CLQ8ND94 238 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 ABCG8Q9H221 673 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 NRP2O60462 931 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 CBFA2T3O75081 653 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 LYPLA1O75608 230 aaPredicted RBP11.5□□□□□ -0.57
VCL-202ENST00000372755 CD52P31358 61 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 ZNF132P52740 706 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 HSF2Q03933 536 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 TIGD2Q4W5G0 525 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 ATXN7L2Q5T6C5 722 aaPredicted RBP11.5□□□□□ -0.57
VCL-202ENST00000372755 SNX20Q7Z614 316 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 ALYREFQ86V81 257 aaKnown RBP11.5□□□□□ -0.57
VCL-202ENST00000372755 FCRL4Q96PJ5 515 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 NXF3Q9H4D5 531 aaKnown RBP11.5□□□□□ -0.57
VCL-202ENST00000372755 SMURF2Q9HAU4 748 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 TBC1D14Q9P2M4 693 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 SEC14L3Q9UDX4 400 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 PTPRMP28827 1452 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 MDM4O15151 490 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 PAGE1O75459 146 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 NADKO95544 446 aaPredicted RBP11.5□□□□□ -0.57
VCL-202ENST00000372755 DRD4P21917 467 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 PPP2R2BQ00005 443 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 GCNT6Q5T4J0 391 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 STRADAQ7RTN6 431 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 SPPL2BQ8TCT7 592 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 DGCR14Q96DF8 476 aaKnown RBP11.5□□□□□ -0.57
VCL-202ENST00000372755 RNF31Q96EP0 1072 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 BTN2A3PQ96KV6 586 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 LRTM1Q9HBL6 345 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 EFR3BQ9Y2G0 817 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 COL1A2P08123 1366 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 CXCL14O95715 111 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 RLN1P04808 185 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 PTPN9P43378 593 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 FAM91A1Q658Y4 838 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 LRRC55Q6ZSA7 311 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 CPSF7Q8N684 471 aaKnown RBP11.5□□□□□ -0.57
VCL-202ENST00000372755 LHX5Q9H2C1 402 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 RCOR3Q9P2K3 495 aaPredicted RBP11.5□□□□□ -0.57
VCL-202ENST00000372755 GULP1Q9UBP9 304 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 IKZF2Q9UKS7 526 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 YDJCA8MPS7 323 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 SPATA31C2B4DYI2 1134 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 NEDD8-MDP1E9PL57 170 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 ENTPD5O75356 428 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 BPGMP07738 259 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 IDSP22304 550 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 NDUFV1P49821 464 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 CCL23P55773 120 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 ENPEPQ07075 957 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 BMT2Q1RMZ1 405 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 ZACNQ401N2 412 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 RNASEH2BQ5TBB1 312 aaKnown RBP11.49□□□□□ -0.57
VCL-202ENST00000372755 GPR142Q7Z601 462 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 C12orf50Q8NA57 414 aaPredicted RBP11.49□□□□□ -0.57
VCL-202ENST00000372755 P2RY11Q96G91 374 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 CCDC28BQ9BUN5 200 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 MRIQ9BWK5 157 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 COLEC10Q9Y6Z7 277 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 ATP6AP2A0A1C7CYW4 349 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 PER2O15055 1255 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 ATP6AP2O75787 350 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 C22orf31O95567 290 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 GABRR2P28476 465 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 ALDH3A2P51648 485 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 PPP1R26Q5T8A7 1209 aaPredicted RBP11.49□□□□□ -0.57
VCL-202ENST00000372755 ZNF697Q5TEC3 545 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 FOXR1Q6PIV2 292 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 IQCF2Q8IXL9 164 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 VANGL1Q8TAA9 524 aaPredicted RBP11.49□□□□□ -0.57
VCL-202ENST00000372755 FAR1Q8WVX9 515 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 METTL21AQ8WXB1 218 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 C1GALT1C1Q96EU7 318 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 TTPALQ9BTX7 342 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 PNPOQ9NVS9 261 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 EGFL7Q9UHF1 273 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 PRMT5O14744 637 aaPredicted RBP11.49□□□□□ -0.57
VCL-202ENST00000372755 HTR7P34969 479 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 POLR2JP52435 117 aaKnown RBP11.49□□□□□ -0.57
VCL-202ENST00000372755 HECTD2Q5U5R9 776 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 SDHAF4Q5VUM1 108 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 FAM124AQ86V42 546 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 MCFD2Q8NI22 146 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms