RNA–Protein interactions for RNA: ENST00000372017.3

SNCG-202, Transcript of synuclein gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCG, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-202ENST00000372017 LRRC61Q9BV99 259 aa12.52□□□□□ -0.41
SNCG-202ENST00000372017 FRMD8Q9BZ67 464 aaPredicted RBP12.52□□□□□ -0.41
SNCG-202ENST00000372017 FAM83DQ9H4H8 585 aa12.52□□□□□ -0.41
SNCG-202ENST00000372017 WDR26Q9H7D7 661 aa12.52□□□□□ -0.41
SNCG-202ENST00000372017 ARFGAP3Q9NP61 516 aa12.52□□□□□ -0.41
SNCG-202ENST00000372017 RAB6BQ9NRW1 208 aa12.52□□□□□ -0.41
SNCG-202ENST00000372017 KCTD5Q9NXV2 234 aa12.52□□□□□ -0.41
SNCG-202ENST00000372017 PKD2L2Q9NZM6 624 aa12.52□□□□□ -0.41
SNCG-202ENST00000372017 TMEM98Q9Y2Y6 226 aa12.52□□□□□ -0.41
SNCG-202ENST00000372017 NEU2Q9Y3R4 380 aa12.52□□□□□ -0.41
SNCG-202ENST00000372017 ST14Q9Y5Y6 855 aa12.52□□□□□ -0.41
SNCG-202ENST00000372017 CNOT1A5YKK6 2376 aaKnown RBP12.51□□□□□ -0.41
SNCG-202ENST00000372017 SPAARA0A1B0GVQ0 90 aa12.51□□□□□ -0.41
SNCG-202ENST00000372017 TCRBV7S3A2A0A539 114 aa12.51□□□□□ -0.41
SNCG-202ENST00000372017 RGSL1A5PLK6 1076 aa12.51□□□□□ -0.41
SNCG-202ENST00000372017 CACNB4O00305 520 aaPredicted RBP12.51□□□□□ -0.41
SNCG-202ENST00000372017 FLRT2O43155 660 aa12.51□□□□□ -0.41
SNCG-202ENST00000372017 GPR39O43194 453 aa12.51□□□□□ -0.41
SNCG-202ENST00000372017 SUN1O94901 812 aa12.51□□□□□ -0.41
SNCG-202ENST00000372017 MYF5P13349 255 aa12.51□□□□□ -0.41
SNCG-202ENST00000372017 MSNP26038 577 aaKnown RBP12.51□□□□□ -0.41
SNCG-202ENST00000372017 NOVA1P51513 510 aaKnown RBP12.51□□□□□ -0.41
SNCG-202ENST00000372017 HK3P52790 923 aa12.51□□□□□ -0.41
SNCG-202ENST00000372017 SRP54P61011 504 aaKnown RBP12.51□□□□□ -0.41
SNCG-202ENST00000372017 ZNF648Q5T619 568 aaPredicted RBP12.51□□□□□ -0.41
SNCG-202ENST00000372017 RD3Q7Z3Z2 195 aa12.51□□□□□ -0.41
SNCG-202ENST00000372017 GLT6D1Q7Z4J2 308 aa12.51□□□□□ -0.41
SNCG-202ENST00000372017 HID1Q8IV36 788 aa12.51□□□□□ -0.41
SNCG-202ENST00000372017 OR56A4Q8NGH8 313 aa12.51□□□□□ -0.41
SNCG-202ENST00000372017 OR52K1Q8NGK4 314 aa12.51□□□□□ -0.41
SNCG-202ENST00000372017 LMX1AQ8TE12 382 aa12.51□□□□□ -0.41
SNCG-202ENST00000372017 MAGOHBQ96A72 148 aaKnown RBP12.51□□□□□ -0.41
SNCG-202ENST00000372017 CAPZA3Q96KX2 299 aa12.51□□□□□ -0.41
SNCG-202ENST00000372017 TRABDQ9H4I3 376 aa12.51□□□□□ -0.41
SNCG-202ENST00000372017 TOR4AQ9NXH8 423 aa12.51□□□□□ -0.41
SNCG-202ENST00000372017 PAK5Q9P286 719 aa12.51□□□□□ -0.41
SNCG-202ENST00000372017 NFKBIL1Q9UBC1 381 aaPredicted RBP12.51□□□□□ -0.41
SNCG-202ENST00000372017 KLQ9UEF7 1012 aa12.51□□□□□ -0.41
SNCG-202ENST00000372017 ANGPTL2Q9UKU9 493 aa12.51□□□□□ -0.41
SNCG-202ENST00000372017 PLEKHM1Q9Y4G2 1056 aa12.51□□□□□ -0.41
SNCG-202ENST00000372017 WDFY3Q8IZQ1 3526 aa12.51□□□□□ -0.41
SNCG-202ENST00000372017 CACNA1GO43497 2377 aa12.5□□□□□ -0.41
SNCG-202ENST00000372017 LY6G6EA0A0G2JKS1 128 aa12.5□□□□□ -0.41
SNCG-202ENST00000372017 YKT6O15498 198 aa12.5□□□□□ -0.41
SNCG-202ENST00000372017 FFAR2O15552 330 aa12.5□□□□□ -0.41
SNCG-202ENST00000372017 AQP9O43315 295 aa12.5□□□□□ -0.41
SNCG-202ENST00000372017 LDB2O43679 373 aa12.5□□□□□ -0.41
SNCG-202ENST00000372017 SIGLEC6O43699 453 aa12.5□□□□□ -0.41
SNCG-202ENST00000372017 CEACAM1P13688 526 aa12.5□□□□□ -0.41
SNCG-202ENST00000372017 TCP1P17987 556 aaKnown RBP12.5□□□□□ -0.41
SNCG-202ENST00000372017 FDFT1P37268 417 aa12.5□□□□□ -0.41
SNCG-202ENST00000372017 GRK6P43250 576 aa12.5□□□□□ -0.41
SNCG-202ENST00000372017 DCDC1P59894 354 aa12.5□□□□□ -0.41
SNCG-202ENST00000372017 HNRNPKP61978 463 aaKnown RBP eCLIP12.5□□□□□ -0.41
SNCG-202ENST00000372017 PPARDQ03181 441 aa12.5□□□□□ -0.41
SNCG-202ENST00000372017 SUZ12Q15022 739 aaKnown RBP12.5□□□□□ -0.41
SNCG-202ENST00000372017 KHDC1Q4VXA5 237 aaKnown RBP12.5□□□□□ -0.41
SNCG-202ENST00000372017 PRRT3Q5FWE3 981 aa12.5□□□□□ -0.41
SNCG-202ENST00000372017 CCDC137Q6PK04 289 aaKnown RBP12.5□□□□□ -0.41
SNCG-202ENST00000372017 SLCO6A1Q86UG4 719 aa12.5□□□□□ -0.41
SNCG-202ENST00000372017 SFTPA2Q8IWL1 248 aa12.5□□□□□ -0.41
SNCG-202ENST00000372017 CCDC89Q8N998 374 aa12.5□□□□□ -0.41
SNCG-202ENST00000372017 OR13C4Q8NGS5 318 aa12.5□□□□□ -0.41
SNCG-202ENST00000372017 ATL2Q8NHH9 583 aa12.5□□□□□ -0.41
SNCG-202ENST00000372017 CCL4L1Q8NHW4 92 aa12.5□□□□□ -0.41
SNCG-202ENST00000372017 HIC2Q96JB3 615 aa12.5□□□□□ -0.41
SNCG-202ENST00000372017 TMEM168Q9H0V1 697 aa12.5□□□□□ -0.41
SNCG-202ENST00000372017 LRRC40Q9H9A6 602 aa12.5□□□□□ -0.41
SNCG-202ENST00000372017 CYP4F12Q9HCS2 524 aa12.5□□□□□ -0.41
SNCG-202ENST00000372017 IL26Q9NPH9 171 aa12.5□□□□□ -0.41
SNCG-202ENST00000372017 PHPT1Q9NRX4 125 aaPredicted RBP12.5□□□□□ -0.41
SNCG-202ENST00000372017 HOMER3Q9NSC5 361 aa12.5□□□□□ -0.41
SNCG-202ENST00000372017 APOBEC3BQ9UH17 382 aaKnown RBP12.5□□□□□ -0.41
SNCG-202ENST00000372017 SLC17A4Q9Y2C5 497 aa12.5□□□□□ -0.41
SNCG-202ENST00000372017 SAR1BQ9Y6B6 198 aa12.5□□□□□ -0.41
SNCG-202ENST00000372017 DGKBQ9Y6T7 804 aa12.5□□□□□ -0.41
SNCG-202ENST00000372017 U3KQA8 63 aa12.5□□□□□ -0.41
SNCG-202ENST00000372017 PRSS38A1L453 326 aa12.49□□□□□ -0.41
SNCG-202ENST00000372017 CTAGE9A4FU28 777 aa12.49□□□□□ -0.41
SNCG-202ENST00000372017 CCL22O00626 93 aa12.49□□□□□ -0.41
SNCG-202ENST00000372017 TNFRSF10CO14798 259 aa12.49□□□□□ -0.41
SNCG-202ENST00000372017 UGT1A9O60656 530 aa12.49□□□□□ -0.41
SNCG-202ENST00000372017 PHF2O75151 1096 aa12.49□□□□□ -0.41
SNCG-202ENST00000372017 KRT14P02533 472 aa12.49□□□□□ -0.41
SNCG-202ENST00000372017 UGT1A6P19224 532 aa12.49□□□□□ -0.41
SNCG-202ENST00000372017 UGT1A1P22309 533 aa12.49□□□□□ -0.41
SNCG-202ENST00000372017 UGT1A4P22310 534 aa12.49□□□□□ -0.41
SNCG-202ENST00000372017 HTR1BP28222 390 aa12.49□□□□□ -0.41
SNCG-202ENST00000372017 UGT1A3P35503 534 aa12.49□□□□□ -0.41
SNCG-202ENST00000372017 UGT1A5P35504 534 aa12.49□□□□□ -0.41
SNCG-202ENST00000372017 VPS41P49754 854 aa12.49□□□□□ -0.41
SNCG-202ENST00000372017 ZNF140P52738 457 aaPredicted RBP12.49□□□□□ -0.41
SNCG-202ENST00000372017 TERF1P54274 439 aa12.49□□□□□ -0.41
SNCG-202ENST00000372017 XIAPP98170 497 aa12.49□□□□□ -0.41
SNCG-202ENST00000372017 DNAJC3Q13217 504 aa12.49□□□□□ -0.41
SNCG-202ENST00000372017 TAF1AQ15573 450 aaPredicted RBP12.49□□□□□ -0.41
SNCG-202ENST00000372017 TRIP6Q15654 476 aaKnown RBP12.49□□□□□ -0.41
SNCG-202ENST00000372017 CHRNA6Q15825 494 aa12.49□□□□□ -0.41
SNCG-202ENST00000372017 DEFB133Q30KQ1 61 aa12.49□□□□□ -0.41
SNCG-202ENST00000372017 PROX2Q3B8N5 592 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms