RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 FAM45BPQ6NSW5 357 aa23.78■■□□□ 1.4
SNX3-203ENST00000368979 ZNF549Q6P9A3 640 aa23.78■■□□□ 1.4
SNX3-203ENST00000368979 LVRNQ6Q4G3 990 aa23.78■■□□□ 1.4
SNX3-203ENST00000368979 CEP97Q8IW35 865 aa23.78■■□□□ 1.4
SNX3-203ENST00000368979 FAM45AQ8TCE6 357 aa23.78■■□□□ 1.4
SNX3-203ENST00000368979 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.78■■□□□ 1.46e-11■■■■□ 23.5
SNX3-203ENST00000368979 OLFM1Q99784 485 aa23.78■■□□□ 1.4
SNX3-203ENST00000368979 RSPH9Q9H1X1 276 aaPredicted RBP23.78■■□□□ 1.4
SNX3-203ENST00000368979 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.78■■□□□ 1.4
SNX3-203ENST00000368979 DCDC2Q9UHG0 476 aa23.78■■□□□ 1.4
SNX3-203ENST00000368979 SHISA7A6NL88 538 aa23.77■■□□□ 1.4
SNX3-203ENST00000368979 PFDN6O15212 129 aa23.77■■□□□ 1.4
SNX3-203ENST00000368979 PHGDHO43175 533 aaKnown RBP23.77■■□□□ 1.4
SNX3-203ENST00000368979 NDUFS3O75489 264 aa23.77■■□□□ 1.4
SNX3-203ENST00000368979 DHRS4L1P0CG22 281 aa23.77■■□□□ 1.4
SNX3-203ENST00000368979 SLC35E2BP0CK96 405 aa23.77■■□□□ 1.4
SNX3-203ENST00000368979 SRFP11831 508 aa23.77■■□□□ 1.4
SNX3-203ENST00000368979 ADRB3P13945 408 aa23.77■■□□□ 1.4
SNX3-203ENST00000368979 SAT1P21673 171 aa23.77■■□□□ 1.4
SNX3-203ENST00000368979 NTSR1P30989 418 aa23.77■■□□□ 1.4
SNX3-203ENST00000368979 PSMD8P48556 350 aa23.77■■□□□ 1.4
SNX3-203ENST00000368979 TDGQ13569 410 aa23.77■■□□□ 1.4
SNX3-203ENST00000368979 TERF2Q15554 542 aa23.77■■□□□ 1.4
SNX3-203ENST00000368979 CHRNA6Q15825 494 aa23.77■■□□□ 1.4
SNX3-203ENST00000368979 FAM46CQ5VWP2 391 aa23.77■■□□□ 1.4
SNX3-203ENST00000368979 CERS6Q6ZMG9 384 aa23.77■■□□□ 1.4
SNX3-203ENST00000368979 RFLNAQ6ZTI6 216 aa23.77■■□□□ 1.4
SNX3-203ENST00000368979 HSD11B1LQ7Z5J1 315 aa23.77■■□□□ 1.4
SNX3-203ENST00000368979 IL17RCQ8NAC3 791 aa23.77■■□□□ 1.4
SNX3-203ENST00000368979 GDAP1Q8TB36 358 aa23.77■■□□□ 1.4
SNX3-203ENST00000368979 FAM111AQ96PZ2 611 aa23.77■■□□□ 1.4
SNX3-203ENST00000368979 HDAC8Q9BY41 377 aa23.77■■□□□ 1.4
SNX3-203ENST00000368979 ASB8Q9H765 288 aa23.77■■□□□ 1.4
SNX3-203ENST00000368979 DYRK4Q9NR20 520 aa23.77■■□□□ 1.4
SNX3-203ENST00000368979 NFKBIL1Q9UBC1 381 aaPredicted RBP23.77■■□□□ 1.4
SNX3-203ENST00000368979 GRID1Q9ULK0 1009 aa23.77■■□□□ 1.4
SNX3-203ENST00000368979 ANKRD6Q9Y2G4 727 aa23.77■■□□□ 1.4
SNX3-203ENST00000368979 VWA7Q9Y334 891 aa23.77■■□□□ 1.4
SNX3-203ENST00000368979 AGAP14A8MT82 685 aa23.76■■□□□ 1.39
SNX3-203ENST00000368979 LOC730098B7Z3J9 87 aa23.76■■□□□ 1.39
SNX3-203ENST00000368979 AREL1O15033 823 aa23.76■■□□□ 1.39
SNX3-203ENST00000368979 GSTA1P08263 222 aa23.76■■□□□ 1.39
SNX3-203ENST00000368979 CRABP2P29373 138 aa23.76■■□□□ 1.39
SNX3-203ENST00000368979 CA5AP35218 305 aa23.76■■□□□ 1.39
SNX3-203ENST00000368979 GMPRP36959 345 aa23.76■■□□□ 1.39
SNX3-203ENST00000368979 DCDC1P59894 354 aa23.76■■□□□ 1.39
SNX3-203ENST00000368979 IRF9Q00978 393 aa23.76■■□□□ 1.39
SNX3-203ENST00000368979 SEPT7Q16181 437 aaKnown RBP23.76■■□□□ 1.39
SNX3-203ENST00000368979 GPR33Q49SQ1 333 aa23.76■■□□□ 1.39
SNX3-203ENST00000368979 TAF1BQ53T94 588 aaPredicted RBP23.76■■□□□ 1.39
SNX3-203ENST00000368979 FBXL19Q6PCT2 694 aa23.76■■□□□ 1.39
SNX3-203ENST00000368979 LIPIQ6XZB0 460 aa23.76■■□□□ 1.39
SNX3-203ENST00000368979 RAPH1Q70E73 1250 aa23.76■■□□□ 1.39
SNX3-203ENST00000368979 ERN2Q76MJ5 926 aaKnown RBP23.76■■□□□ 1.39
SNX3-203ENST00000368979 TAS2R42Q7RTR8 314 aa23.76■■□□□ 1.39
SNX3-203ENST00000368979 DYDC1Q8WWB3 177 aa23.76■■□□□ 1.39
SNX3-203ENST00000368979 CKAP2Q8WWK9 683 aa23.76■■□□□ 1.39
SNX3-203ENST00000368979 TSPAN17Q96FV3 270 aa23.76■■□□□ 1.39
SNX3-203ENST00000368979 AARSD1Q9BTE6 412 aaKnown RBP23.76■■□□□ 1.39
SNX3-203ENST00000368979 FAM50BQ9Y247 325 aa23.76■■□□□ 1.39
SNX3-203ENST00000368979 ITM2BQ9Y287 266 aa23.76■■□□□ 1.39
SNX3-203ENST00000368979 EYSQ5T1H1 3165 aa23.75■■□□□ 1.39
SNX3-203ENST00000368979 PLXNA2O75051 1894 aa23.75■■□□□ 1.39
SNX3-203ENST00000368979 SRRM3A6NNA2 597 aaPredicted RBP23.75■■□□□ 1.39
SNX3-203ENST00000368979 H0Y858 1186 aa23.75■■□□□ 1.39
SNX3-203ENST00000368979 PSMD11O00231 422 aa23.75■■□□□ 1.39
SNX3-203ENST00000368979 SYNCRIPO60506 623 aaKnown RBP23.75■■□□□ 1.39
SNX3-203ENST00000368979 FDXRP22570 491 aa23.75■■□□□ 1.39
SNX3-203ENST00000368979 PGGT1BP53609 377 aa23.75■■□□□ 1.39
SNX3-203ENST00000368979 SLC12A2P55011 1212 aa23.75■■□□□ 1.39
SNX3-203ENST00000368979 ADARP55265 1226 aaKnown RBP23.75■■□□□ 1.39
SNX3-203ENST00000368979 IL9RQ01113 521 aa23.75■■□□□ 1.39
SNX3-203ENST00000368979 SATB1Q01826 763 aa23.75■■□□□ 1.39
SNX3-203ENST00000368979 ELP6Q0PNE2 266 aa23.75■■□□□ 1.39
SNX3-203ENST00000368979 ZNF460Q14592 562 aa23.75■■□□□ 1.39
SNX3-203ENST00000368979 C2orf27AQ580R0 203 aa23.75■■□□□ 1.39
SNX3-203ENST00000368979 HHATQ5VTY9 493 aa23.75■■□□□ 1.39
SNX3-203ENST00000368979 PLD6Q8N2A8 252 aaKnown RBP23.75■■□□□ 1.39
SNX3-203ENST00000368979 ZNF398Q8TD17 642 aa23.75■■□□□ 1.39
SNX3-203ENST00000368979 ERLEC1Q96DZ1 483 aa23.75■■□□□ 1.39
SNX3-203ENST00000368979 C1QTNF1Q9BXJ1 281 aa23.75■■□□□ 1.39
SNX3-203ENST00000368979 TLK1Q9UKI8 766 aa23.75■■□□□ 1.39
SNX3-203ENST00000368979 EMCNQ9ULC0 261 aa23.75■■□□□ 1.39
SNX3-203ENST00000368979 UBA6A0AVT1 1052 aaPredicted RBP23.74■■□□□ 1.39
SNX3-203ENST00000368979 PLK4O00444 970 aa23.74■■□□□ 1.39
SNX3-203ENST00000368979 ADAM23O75077 832 aa23.74■■□□□ 1.39
SNX3-203ENST00000368979 PTGER3P43115 390 aa23.74■■□□□ 1.39
SNX3-203ENST00000368979 CDKN2DP55273 166 aa23.74■■□□□ 1.39
SNX3-203ENST00000368979 MRPS21P82921 87 aaKnown RBP23.74■■□□□ 1.39
SNX3-203ENST00000368979 DBN1Q16643 649 aa23.74■■□□□ 1.39
SNX3-203ENST00000368979 KYAT3Q6YP21 454 aaKnown RBP23.74■■□□□ 1.39
SNX3-203ENST00000368979 TRMT11Q7Z4G4 463 aaKnown RBP23.74■■□□□ 1.39
SNX3-203ENST00000368979 LCA5Q86VQ0 697 aa23.74■■□□□ 1.39
SNX3-203ENST00000368979 SERPINA9Q86WD7 417 aa23.74■■□□□ 1.39
SNX3-203ENST00000368979 RAVER1Q8IY67 606 aaKnown RBP23.74■■□□□ 1.39
SNX3-203ENST00000368979 DTX3LQ8TDB6 740 aa23.74■■□□□ 1.39
SNX3-203ENST00000368979 BIRC8Q96P09 236 aa23.74■■□□□ 1.39
SNX3-203ENST00000368979 PAIP2Q9BPZ3 127 aaKnown RBP23.74■■□□□ 1.39
SNX3-203ENST00000368979 RAD18Q9NS91 495 aa23.74■■□□□ 1.39
SNX3-203ENST00000368979 RGSL1A5PLK6 1076 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms