RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 CD101Q93033 1021 aa3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 TMEM68Q96MH6 324 aa3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 C7orf26Q96N11 449 aa3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 UNC45AQ9H3U1 944 aa3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 RANGRFQ9HD47 186 aaPredicted RBP3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 LTB4R2Q9NPC1 389 aa3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 DLGAP2Q9P1A6 1054 aa3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 LIMA1Q9UHB6 759 aaKnown RBP3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 AMDHD2Q9Y303 409 aa3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 ADAM18Q9Y3Q7 739 aa3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 KCNE2Q9Y6J6 123 aa3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 BMPR1BO00238 502 aa3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 SPINT2O43291 252 aa3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 MBD4O95243 580 aa3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 IGLV2-11P01706 119 aa3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 HSPA1AP0DMV8 641 aaKnown RBP3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 HSPA1BP0DMV9 641 aaKnown RBP3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 AMD1P17707 334 aa3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 PAX3P23760 479 aa3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 MCM3P25205 808 aa3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 TAS2R38P59533 333 aa3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 ISL1P61371 349 aa3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 FOXM1Q08050 763 aa3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 MED22Q15528 200 aa3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 CCDC96Q2M329 555 aa3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 FRG2Q64ET8 278 aa3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 TTI2Q6NXR4 508 aa3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 BRAT1Q6PJG6 821 aa3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 Q6ZTC4 211 aa3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 FOXL2NBQ6ZUU3 175 aa3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 TMTC3Q6ZXV5 915 aa3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 CACNA2D4Q7Z3S7 1137 aa3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 DSG4Q86SJ6 1040 aa3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 SLC9B2Q86UD5 537 aa3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 NRROSQ86YC3 692 aa3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 RNF113BQ8IZP6 322 aaKnown RBP3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 UCMAQ8WVF2 138 aa3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 ARHGEF26Q96DR7 871 aa3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 INPP4AQ96PE3 977 aaPredicted RBP3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 NODALQ96S42 347 aa3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 PLEKHA5Q9HAU0 1116 aa3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 KLHL1Q9NR64 748 aa3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 ORC3Q9UBD5 711 aaPredicted RBP3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 AASSQ9UDR5 926 aa3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 RALYQ9UKM9 306 aaKnown RBP3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 ACSL5Q9ULC5 683 aa3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 OR2W1Q9Y3N9 320 aa3.14□□□□□ -1.91
RNU4-48P-201ENST00000365559 LILRA5A6NI73 299 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 M0QZ24 198 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 EPB41L2O43491 1005 aaKnown RBP3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 KCNK5O95279 499 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 IPO7O95373 1038 aaKnown RBP3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 UMODP07911 640 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 KCNA5P22460 613 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 HOXC9P31274 260 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 APOBEC1P41238 236 aaKnown RBP3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 FASLGP48023 281 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 ACSM2AQ08AH3 577 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 TROAPQ12815 778 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 GRIK2Q13002 908 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 DECR1Q16698 335 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 C9orf50Q5SZB4 431 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 DCST1Q5T197 706 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 STXBP5Q5T5C0 1151 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 IRAK1BP1Q5VVH5 260 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 RAD9BQ6WBX8 426 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 MEX3BQ6ZN04 569 aaKnown RBP3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 ASB18Q6ZVZ8 466 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 USP43Q70EL4 1123 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 PXKQ7Z7A4 578 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 KMT5CQ86Y97 462 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 CIARTQ8N365 385 aaPredicted RBP3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 PAF1Q8N7H5 531 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 FRMD1Q8N878 549 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 MAB21L3Q8N8X9 362 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 KCNH5Q8NCM2 988 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 TAAR8Q969N4 342 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 CDCA5Q96FF9 252 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 MPP4Q96JB8 637 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 HARBI1Q96MB7 349 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 PDZD7Q9H5P4 517 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 SDF2L1Q9HCN8 221 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 TCF7L2Q9NQB0 619 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 ZNF112Q9UJU3 913 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 CLIC4Q9Y696 253 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 MAU2Q9Y6X3 613 aa3.13□□□□□ -1.91
RNU4-48P-201ENST00000365559 ASPDHA6ND91 283 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 LIPT2A6NK58 231 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 ATP2A1O14983 1001 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 LMX1BO60663 402 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 JRKO75564 520 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 SLC25A12O75746 678 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 CCNDBP1O95273 360 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 EIF2S1P05198 315 aaKnown RBP3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 TNFAIP3P21580 790 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 UBA1P22314 1058 aaKnown RBP3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 NFKBIAP25963 317 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 MAN1A1P33908 653 aa3.12□□□□□ -1.91
RNU4-48P-201ENST00000365559 GNL1P36915 607 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms