RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 DENRO43583 198 aaKnown RBP22.53■■□□□ 1.2
LDB1-201ENST00000361198 HSPA1AP0DMV8 641 aaKnown RBP22.53■■□□□ 1.2
LDB1-201ENST00000361198 HSPA1BP0DMV9 641 aaKnown RBP22.53■■□□□ 1.2
LDB1-201ENST00000361198 CHRM1P11229 460 aaPredicted RBP22.53■■□□□ 1.2
LDB1-201ENST00000361198 XRCC1P18887 633 aaPredicted RBP22.53■■□□□ 1.2
LDB1-201ENST00000361198 CDKN1CP49918 316 aaPredicted RBP22.53■■□□□ 1.2
LDB1-201ENST00000361198 POLE2P56282 527 aa22.53■■□□□ 1.2
LDB1-201ENST00000361198 ILF2Q12905 390 aaKnown RBP22.53■■□□□ 1.2
LDB1-201ENST00000361198 CEACAM7Q14002 265 aa22.53■■□□□ 1.2
LDB1-201ENST00000361198 FLOT2Q14254 428 aa22.53■■□□□ 1.2
LDB1-201ENST00000361198 AFTPHQ6ULP2 937 aa22.53■■□□□ 1.2
LDB1-201ENST00000361198 DDX53Q86TM3 631 aaKnown RBP22.53■■□□□ 1.2
LDB1-201ENST00000361198 BHMTQ93088 406 aa22.53■■□□□ 1.2
LDB1-201ENST00000361198 FEM1AQ9BSK4 669 aa22.53■■□□□ 1.2
LDB1-201ENST00000361198 IL21Q9HBE4 155 aa22.53■■□□□ 1.2
LDB1-201ENST00000361198 MED16Q9Y2X0 877 aa22.53■■□□□ 1.2
LDB1-201ENST00000361198 A0A0U1RQS6 177 aa22.52■■□□□ 1.2
LDB1-201ENST00000361198 H3BMM5 538 aa22.52■■□□□ 1.2
LDB1-201ENST00000361198 PABPC4LP0CB38 370 aaKnown RBP22.52■■□□□ 1.2
LDB1-201ENST00000361198 PDAP1Q13442 181 aaKnown RBP22.52■■□□□ 1.2
LDB1-201ENST00000361198 ZNF678Q5SXM1 525 aa22.52■■□□□ 1.2
LDB1-201ENST00000361198 C1orf53Q5VUE5 145 aa22.52■■□□□ 1.2
LDB1-201ENST00000361198 FAM219BQ5XKK7 198 aa22.52■■□□□ 1.2
LDB1-201ENST00000361198 FBXL19Q6PCT2 694 aa22.52■■□□□ 1.2
LDB1-201ENST00000361198 WFDC5Q8TCV5 224 aa22.52■■□□□ 1.2
LDB1-201ENST00000361198 LPGAT1Q92604 370 aa22.52■■□□□ 1.2
LDB1-201ENST00000361198 EXT2Q93063 718 aa22.52■■□□□ 1.2
LDB1-201ENST00000361198 WDR41Q9HAD4 459 aa22.52■■□□□ 1.2
LDB1-201ENST00000361198 POPDC3Q9HBV1 291 aa22.52■■□□□ 1.2
LDB1-201ENST00000361198 COPG1Q9Y678 874 aaKnown RBP22.52■■□□□ 1.2
LDB1-201ENST00000361198 ABHD14A-ACY1A0A1B0GW23 586 aa22.52■■□□□ 1.2
LDB1-201ENST00000361198 UBFD1O14562 309 aaKnown RBP22.52■■□□□ 1.2
LDB1-201ENST00000361198 TEX28O15482 410 aa22.52■■□□□ 1.2
LDB1-201ENST00000361198 SUPT7LO94864 414 aa22.52■■□□□ 1.2
LDB1-201ENST00000361198 CAPNS1P04632 268 aa22.52■■□□□ 1.2
LDB1-201ENST00000361198 TSPAN8P19075 237 aa22.52■■□□□ 1.2
LDB1-201ENST00000361198 LPOP22079 712 aaPredicted RBP22.52■■□□□ 1.2
LDB1-201ENST00000361198 FMO4P31512 558 aa22.52■■□□□ 1.2
LDB1-201ENST00000361198 DPP6P42658 865 aa22.52■■□□□ 1.2
LDB1-201ENST00000361198 CHN2P52757 468 aa22.52■■□□□ 1.2
LDB1-201ENST00000361198 C1QTNF8P60827 252 aa22.52■■□□□ 1.2
LDB1-201ENST00000361198 GALNT1Q10472 559 aaPredicted RBP22.52■■□□□ 1.2
LDB1-201ENST00000361198 TICAM1Q8IUC6 712 aa22.52■■□□□ 1.2
LDB1-201ENST00000361198 MARVELD2Q8N4S9 558 aa22.52■■□□□ 1.2
LDB1-201ENST00000361198 EFHBQ8N7U6 833 aa22.52■■□□□ 1.2
LDB1-201ENST00000361198 CEP70Q8NHQ1 597 aa22.52■■□□□ 1.2
LDB1-201ENST00000361198 TMA16Q96EY4 203 aaKnown RBP22.52■■□□□ 1.2
LDB1-201ENST00000361198 ADGRE3Q9BY15 652 aa22.52■■□□□ 1.2
LDB1-201ENST00000361198 LHX3Q9UBR4 397 aa22.52■■□□□ 1.2
LDB1-201ENST00000361198 FAM50BQ9Y247 325 aa22.52■■□□□ 1.2
LDB1-201ENST00000361198 CPQQ9Y646 472 aa22.52■■□□□ 1.2
LDB1-201ENST00000361198 LTBP2Q14767 1821 aa22.52■■□□□ 1.2
LDB1-201ENST00000361198 OBSL1O75147 1896 aa22.52■■□□□ 1.19
LDB1-201ENST00000361198 CAPN8A6NHC0 703 aa22.51■■□□□ 1.19
LDB1-201ENST00000361198 LAG3P18627 525 aa22.51■■□□□ 1.19
LDB1-201ENST00000361198 HDCP19113 662 aa22.51■■□□□ 1.19
LDB1-201ENST00000361198 PSMA3P25788 255 aa22.51■■□□□ 1.19
LDB1-201ENST00000361198 ITGB8P26012 769 aa22.51■■□□□ 1.19
LDB1-201ENST00000361198 MS4A2Q01362 244 aa22.51■■□□□ 1.19
LDB1-201ENST00000361198 SATB1Q01826 763 aa22.51■■□□□ 1.19
LDB1-201ENST00000361198 OR4D1Q15615 310 aa22.51■■□□□ 1.19
LDB1-201ENST00000361198 EML3Q32P44 896 aa22.51■■□□□ 1.19
LDB1-201ENST00000361198 SETMARQ53H47 684 aaPredicted RBP22.51■■□□□ 1.19
LDB1-201ENST00000361198 NCEH1Q6PIU2 408 aa22.51■■□□□ 1.19
LDB1-201ENST00000361198 ZNF783Q6ZMS7 281 aa22.51■■□□□ 1.19
LDB1-201ENST00000361198 DLG3Q92796 817 aa22.51■■□□□ 1.19
LDB1-201ENST00000361198 L3HYPDHQ96EM0 354 aa22.51■■□□□ 1.19
LDB1-201ENST00000361198 MRPL17Q9NRX2 175 aaKnown RBP22.51■■□□□ 1.19
LDB1-201ENST00000361198 RIMS3Q9UJD0 308 aa22.51■■□□□ 1.19
LDB1-201ENST00000361198 FCF1Q9Y324 198 aaKnown RBP22.51■■□□□ 1.19
LDB1-201ENST00000361198 OR51B4Q9Y5P0 310 aa22.51■■□□□ 1.19
LDB1-201ENST00000361198 LATS1O95835 1130 aa22.51■■□□□ 1.19
LDB1-201ENST00000361198 ARSAP15289 507 aa22.51■■□□□ 1.19
LDB1-201ENST00000361198 ME2P23368 584 aa22.51■■□□□ 1.19
LDB1-201ENST00000361198 NFKB2Q00653 900 aa22.51■■□□□ 1.19
LDB1-201ENST00000361198 ADGRE1Q14246 886 aa22.51■■□□□ 1.19
LDB1-201ENST00000361198 CNPY1Q3B7I2 92 aa22.51■■□□□ 1.19
LDB1-201ENST00000361198 UNC50Q53HI1 259 aa22.51■■□□□ 1.19
LDB1-201ENST00000361198 PIANPQ8IYJ0 282 aa22.51■■□□□ 1.19
LDB1-201ENST00000361198 DCUN1D1Q96GG9 259 aa22.51■■□□□ 1.19
LDB1-201ENST00000361198 BPIFA1Q9NP55 256 aa22.51■■□□□ 1.19
LDB1-201ENST00000361198 FKBPLQ9UIM3 349 aa22.51■■□□□ 1.19
LDB1-201ENST00000361198 LAMA3Q16787 3333 aa22.5■■□□□ 1.19
LDB1-201ENST00000361198 GFRA2O00451 464 aa22.5■■□□□ 1.19
LDB1-201ENST00000361198 BCAS2O75934 225 aaPredicted RBP22.5■■□□□ 1.19
LDB1-201ENST00000361198 RHOBTB1O94844 696 aa22.5■■□□□ 1.19
LDB1-201ENST00000361198 OLFM2O95897 454 aa22.5■■□□□ 1.19
LDB1-201ENST00000361198 PENKP01210 267 aaPredicted RBP22.5■■□□□ 1.19
LDB1-201ENST00000361198 GSTT1P30711 240 aa22.5■■□□□ 1.19
LDB1-201ENST00000361198 CSKP41240 450 aa22.5■■□□□ 1.19
LDB1-201ENST00000361198 ART3Q13508 389 aa22.5■■□□□ 1.19
LDB1-201ENST00000361198 INO80DQ53TQ3 878 aaPredicted RBP22.5■■□□□ 1.19
LDB1-201ENST00000361198 PSAPL1Q6NUJ1 521 aa22.5■■□□□ 1.19
LDB1-201ENST00000361198 PAQR3Q6TCH7 311 aa22.5■■□□□ 1.19
LDB1-201ENST00000361198 Q6ZNB5 142 aa22.5■■□□□ 1.19
LDB1-201ENST00000361198 PELI3Q8N2H9 469 aa22.5■■□□□ 1.19
LDB1-201ENST00000361198 HJURPQ8NCD3 748 aaPredicted RBP22.5■■□□□ 1.19
LDB1-201ENST00000361198 GCNAQ96QF7 691 aa22.5■■□□□ 1.19
LDB1-201ENST00000361198 TRIM4Q9C037 500 aa22.5■■□□□ 1.19
LDB1-201ENST00000361198 CRISPLD2Q9H0B8 497 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms