RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 ZDHHC15Q96MV8 337 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 ERMAPQ96PL5 475 aaPredicted RBP6.55□□□□□ -1.36
TRIM38-201ENST00000357085 TCEAL7Q9BRU2 100 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 PDCD10Q9BUL8 212 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 MND1Q9BWT6 205 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 SEZ6LQ9BYH1 1024 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 C12orf10Q9HB07 376 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 GABBR1Q9UBS5 961 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 GMPPBQ9Y5P6 360 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 MATN4O95460 622 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 MYL12AP19105 171 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 MLLT3P42568 568 aaPredicted RBP6.55□□□□□ -1.36
TRIM38-201ENST00000357085 PPP5CP53041 499 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 ECM1Q16610 540 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 CA9Q16790 459 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 TOR1AIP1Q5JTV8 583 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 CREB3L2Q70SY1 520 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 BNIPLQ7Z465 357 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 METTL23Q86XA0 190 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 LGI2Q8N0V4 545 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 DOK1Q99704 481 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 UQCC2Q9BRT2 126 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 NTPCRQ9BSD7 190 aaKnown RBP6.55□□□□□ -1.36
TRIM38-201ENST00000357085 PI4K2AQ9BTU6 479 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 FAM49AQ9H0Q0 323 aaPredicted RBP6.55□□□□□ -1.36
TRIM38-201ENST00000357085 CCDC167Q9P0B6 97 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 SRP68Q9UHB9 627 aaKnown RBP6.55□□□□□ -1.36
TRIM38-201ENST00000357085 PFDN2Q9UHV9 154 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 CNTNAP2Q9UHC6 1331 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 IGKV6D-41A0A0C4DH26 115 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 TCRBV3S1A0A5B6 114 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 SOBPA7XYQ1 873 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 FAM220BPB1ANY3 271 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 C5orf58C9J3I9 102 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 DHFRP00374 187 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 CD72P21854 359 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 XPAP23025 273 aaPredicted RBP6.55□□□□□ -1.36
TRIM38-201ENST00000357085 SULT1E1P49888 294 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 AP2S1P53680 142 aaPredicted RBP6.55□□□□□ -1.36
TRIM38-201ENST00000357085 ANKRD22Q5VYY1 191 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 MPZL3Q6UWV2 235 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 ADAMTSL2Q86TH1 951 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 SLITRK4Q8IW52 837 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 SYNE4Q8N205 404 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 HSFY1Q96LI6 401 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 SIK2Q9H0K1 926 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 KLHL31Q9H511 634 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 AGO4Q9HCK5 861 aaKnown RBP6.55□□□□□ -1.36
TRIM38-201ENST00000357085 CLN6Q9NWW5 311 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 RIMS3Q9UJD0 308 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 F5H423 210 aaPredicted RBP6.55□□□□□ -1.36
TRIM38-201ENST00000357085 ARPC2O15144 300 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 WBP4O75554 376 aaKnown RBP6.55□□□□□ -1.36
TRIM38-201ENST00000357085 ATG7O95352 703 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 HERVK_113P63132 956 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 SV2CQ496J9 727 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 HABP4Q5JVS0 413 aaKnown RBP6.55□□□□□ -1.36
TRIM38-201ENST00000357085 STRIP1Q5VSL9 837 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 LDHDQ86WU2 507 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 CLIP4Q8N3C7 705 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 LINC00471Q8N535 108 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 CDYL2Q8N8U2 506 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 FAM149B1Q96BN6 582 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 HPDLQ96IR7 371 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 GTPBP2Q9BX10 602 aaKnown RBP6.55□□□□□ -1.36
TRIM38-201ENST00000357085 ERVK-6Q9BXR3 956 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 SETD4Q9NVD3 440 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 A0A1B0GVI7 797 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 UBAP1LF5GYI3 381 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 TLL1O43897 1013 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 RPS6KA4O75676 772 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 RENBPP51606 427 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 KIAA0930Q6ICG6 404 aaPredicted RBP6.55□□□□□ -1.36
TRIM38-201ENST00000357085 PID1Q7Z2X4 250 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 ZZZ3Q8IYH5 903 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 OR5T2Q8NGG2 359 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 TMEM176AQ96HP8 235 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 EXOSC4Q9NPD3 245 aaKnown RBP6.55□□□□□ -1.36
TRIM38-201ENST00000357085 TAS2R7Q9NYW3 318 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 GGA3Q9NZ52 723 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 DNAJC5BQ9UF47 199 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 LOC100506127A0A0U1RQW1 187 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 WDPCPO95876 746 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 GMPSP49915 693 aaPredicted RBP6.55□□□□□ -1.36
TRIM38-201ENST00000357085 SRP54P61011 504 aaKnown RBP6.55□□□□□ -1.36
TRIM38-201ENST00000357085 CDKL1Q00532 357 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 KCNA1Q09470 495 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 GNA13Q14344 377 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 TTLL9Q3SXZ7 439 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 PMF1Q6P1K2 205 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 CASP12Q6UXS9 341 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 ZNF367Q7RTV3 350 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 BPHLQ86WA6 291 aaPredicted RBP6.55□□□□□ -1.36
TRIM38-201ENST00000357085 UBE2J2Q8N2K1 259 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 OR13J1Q8NGT2 312 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 MED10Q9BTT4 135 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 PORCNQ9H237 461 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 ANKRA2Q9H9E1 313 aa6.55□□□□□ -1.36
TRIM38-201ENST00000357085 FAM25EA8MYX2 175 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 DLGAP1O14490 977 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms