RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 TRMOQ9BU70 441 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 TMEM27Q9HBJ8 222 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 TRPV5Q9NQA5 729 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 TCRBV9S1A1TA0A576 114 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 POLR2JP52435 117 aaKnown RBP14.84□□□□□ -0.03
LMX1B-201ENST00000355497 DRG2P55039 364 aaKnown RBP14.84□□□□□ -0.03
LMX1B-201ENST00000355497 DLG2Q15700 870 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 ZDHHC20Q5W0Z9 365 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 PRELID2Q8N945 189 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 PDPRQ8NCN5 879 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 SLC4A9Q96Q91 983 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 NXF3Q9H4D5 531 aaKnown RBP14.84□□□□□ -0.03
LMX1B-201ENST00000355497 RNF19AQ9NV58 838 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 RAB23Q9ULC3 237 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 SAGE2PA6NJ88 616 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 PRR5-ARHGAP8B1AHC4 643 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 CACNB4O00305 520 aaPredicted RBP14.84□□□□□ -0.03
LMX1B-201ENST00000355497 MRPS6P82932 125 aaKnown RBP14.84□□□□□ -0.03
LMX1B-201ENST00000355497 ARHGAP8P85298 464 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 BEX3Q00994 111 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 USP4Q13107 963 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 SEMA5AQ13591 1074 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 CELF3Q5SZQ8 465 aaKnown RBP14.84□□□□□ -0.03
LMX1B-201ENST00000355497 GCNT6Q5T4J0 391 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 C9orf64Q5T6V5 341 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 POTEHQ6S545 545 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 PRR23CQ6ZRP0 262 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 CPSF7Q8N684 471 aaKnown RBP14.84□□□□□ -0.03
LMX1B-201ENST00000355497 MYO19Q96H55 970 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 CST11Q9H112 138 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 SEC14L3Q9UDX4 400 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 CAMSAP1Q5T5Y3 1602 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 NRCAMQ92823 1304 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 BPGMP07738 259 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 UROSP10746 265 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 PAX3P23760 479 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 EGFLAMQ63HQ2 1017 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 OR2T34Q8NGX1 318 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 OR2T3Q8NH03 318 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 SLC9A6Q92581 669 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 CRELD1Q96HD1 420 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 ZNF224Q9NZL3 707 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 RAB26Q9ULW5 256 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 BAIAP2Q9UQB8 552 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 C1orf167Q5SNV9 1468 aa14.84□□□□□ -0.03
LMX1B-201ENST00000355497 DLC1Q96QB1 1528 aa14.83□□□□□ -0.03
LMX1B-201ENST00000355497 SCAMP3O14828 347 aaKnown RBP14.83□□□□□ -0.03
LMX1B-201ENST00000355497 EDF1O60869 148 aaKnown RBP14.83□□□□□ -0.03
LMX1B-201ENST00000355497 ELFN1P0C7U0 828 aa14.83□□□□□ -0.03
LMX1B-201ENST00000355497 SAGP10523 405 aaPredicted RBP14.83□□□□□ -0.03
LMX1B-201ENST00000355497 GTF2BQ00403 316 aa14.83□□□□□ -0.03
LMX1B-201ENST00000355497 CNTN2Q02246 1040 aa14.83□□□□□ -0.03
LMX1B-201ENST00000355497 SNX20Q7Z614 316 aa14.83□□□□□ -0.03
LMX1B-201ENST00000355497 CNPPD1Q9BV87 410 aa14.83□□□□□ -0.03
LMX1B-201ENST00000355497 NEUROD4Q9HD90 331 aa14.83□□□□□ -0.03
LMX1B-201ENST00000355497 KCND1Q9NSA2 647 aa14.83□□□□□ -0.03
LMX1B-201ENST00000355497 GNEQ9Y223 722 aaKnown RBP14.83□□□□□ -0.03
LMX1B-201ENST00000355497 CASZ1Q86V15 1759 aa14.83□□□□□ -0.03
LMX1B-201ENST00000355497 FPGTO14772 594 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 ZNF132P52740 706 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 AIF1P55008 147 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 FMO1Q01740 532 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 NRG1Q02297 640 aaPredicted RBP14.83□□□□□ -0.04
LMX1B-201ENST00000355497 GLYATQ6IB77 296 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 C17orf64Q86WR6 236 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 OR2L5Q8NG80 312 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 LRRN4Q8WUT4 740 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 OR8D1Q8WZ84 308 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 EQTNQ9NQ60 294 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 ARL8BQ9NVJ2 186 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 DGKBQ9Y6T7 804 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 BCORL1Q5H9F3 1711 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 ASTN1O14525 1302 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 IQSEC2Q5JU85 1478 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 OR14I1A6ND48 311 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 GPD2P43304 727 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 FAM35AQ86V20 835 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 CLHC1Q8NHS4 586 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 TRNAU1APQ9NX07 287 aaKnown RBP14.83□□□□□ -0.04
LMX1B-201ENST00000355497 DNAJC28Q9NX36 388 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 ZNF510Q9Y2H8 683 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 LSM1O15116 133 aaKnown RBP14.83□□□□□ -0.04
LMX1B-201ENST00000355497 ALOX15BO15296 676 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 ASGR1P07306 291 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 KCNA5P22460 613 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 CCNYL2Q5T2Q4 361 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 EXOC2Q96KP1 924 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 PWWP2AQ96N64 755 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 MTMR9Q96QG7 549 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 AIF1LQ9BQI0 150 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 PMF1-BGLAPU3KQ54 211 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 A0A1W2PPM1 405 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 CCNE2O96020 404 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 PTPRAP18433 802 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 MAGP20916 626 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 MRPS5P82675 430 aaKnown RBP14.83□□□□□ -0.04
LMX1B-201ENST00000355497 LARS2Q15031 903 aaKnown RBP14.83□□□□□ -0.04
LMX1B-201ENST00000355497 PCBP1Q15365 356 aaKnown RBP eCLIP14.83□□□□□ -0.04
LMX1B-201ENST00000355497 ZBTB6Q15916 424 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 KCNK18Q7Z418 384 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms