RNA–Protein interactions for RNA: ENST00000351205.8

SMN1-201, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 900 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-201ENST00000351205 EXD3Q8N9H8 876 aa16.77■□□□□ 0.28
SMN1-201ENST00000351205 LRRN4Q8WUT4 740 aa16.77■□□□□ 0.28
SMN1-201ENST00000351205 ZNF670Q9BS34 389 aa16.77■□□□□ 0.28
SMN1-201ENST00000351205 RBM22Q9NW64 420 aaKnown RBP eCLIP16.77■□□□□ 0.28
SMN1-201ENST00000351205 CAPN11Q9UMQ6 739 aa16.77■□□□□ 0.28
SMN1-201ENST00000351205 CHKBQ9Y259 395 aa16.77■□□□□ 0.28
SMN1-201ENST00000351205 IGHV1OR21-1A0A087WYE8 117 aa16.76■□□□□ 0.27
SMN1-201ENST00000351205 SYCE3A1L190 88 aa16.76■□□□□ 0.27
SMN1-201ENST00000351205 INPP4BO15327 924 aa16.76■□□□□ 0.27
SMN1-201ENST00000351205 PRLP01236 227 aa16.76■□□□□ 0.27
SMN1-201ENST00000351205 HLA-DQB2P05538 268 aa16.76■□□□□ 0.27
SMN1-201ENST00000351205 PYGLP06737 847 aa16.76■□□□□ 0.27
SMN1-201ENST00000351205 WT1P19544 449 aaPredicted RBP16.76■□□□□ 0.27
SMN1-201ENST00000351205 CCNCP24863 283 aa16.76■□□□□ 0.27
SMN1-201ENST00000351205 CD82P27701 267 aa16.76■□□□□ 0.27
SMN1-201ENST00000351205 CSF2RBP32927 897 aa16.76■□□□□ 0.27
SMN1-201ENST00000351205 LIMK2P53671 638 aa16.76■□□□□ 0.27
SMN1-201ENST00000351205 TAS2R40P59535 323 aa16.76■□□□□ 0.27
SMN1-201ENST00000351205 TPM4P67936 248 aa16.76■□□□□ 0.27
SMN1-201ENST00000351205 IFI16Q16666 785 aaKnown RBP16.76■□□□□ 0.27
SMN1-201ENST00000351205 LINC00303Q3SY05 128 aa16.76■□□□□ 0.27
SMN1-201ENST00000351205 TMEM164Q5U3C3 297 aa16.76■□□□□ 0.27
SMN1-201ENST00000351205 NLRP8Q86W28 1048 aa16.76■□□□□ 0.27
SMN1-201ENST00000351205 GALNT13Q8IUC8 556 aa16.76■□□□□ 0.27
SMN1-201ENST00000351205 KCTD6Q8NC69 237 aa16.76■□□□□ 0.27
SMN1-201ENST00000351205 ARRDC2Q8TBH0 407 aa16.76■□□□□ 0.27
SMN1-201ENST00000351205 FATE1Q969F0 183 aa16.76■□□□□ 0.27
SMN1-201ENST00000351205 PMEPA1Q969W9 287 aa16.76■□□□□ 0.27
SMN1-201ENST00000351205 COX14Q96I36 57 aa16.76■□□□□ 0.27
SMN1-201ENST00000351205 TSGA13Q96PP4 275 aa16.76■□□□□ 0.27
SMN1-201ENST00000351205 RIOK2Q9BVS4 552 aaKnown RBP16.76■□□□□ 0.27
SMN1-201ENST00000351205 B3GNT4Q9C0J1 378 aa16.76■□□□□ 0.27
SMN1-201ENST00000351205 AMACRQ9UHK6 382 aa16.76■□□□□ 0.27
SMN1-201ENST00000351205 NENFQ9UMX5 172 aa16.76■□□□□ 0.27
SMN1-201ENST00000351205 LUC7L2Q9Y383 392 aaKnown RBP16.76■□□□□ 0.27
SMN1-201ENST00000351205 PCDHB11Q9Y5F2 797 aa16.76■□□□□ 0.27
SMN1-201ENST00000351205 PCDHGA4Q9Y5G9 962 aa16.76■□□□□ 0.27
SMN1-201ENST00000351205 MYO18BQ8IUG5 2567 aa16.76■□□□□ 0.27
SMN1-201ENST00000351205 TLN1Q9Y490 2541 aaKnown RBP16.75■□□□□ 0.27
SMN1-201ENST00000351205 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.75■□□□□ 0.27
SMN1-201ENST00000351205 CLDN7O95471 211 aa16.75■□□□□ 0.27
SMN1-201ENST00000351205 GYPCP04921 128 aa16.75■□□□□ 0.27
SMN1-201ENST00000351205 ITGB2P05107 769 aa16.75■□□□□ 0.27
SMN1-201ENST00000351205 FGF3P11487 239 aaPredicted RBP16.75■□□□□ 0.27
SMN1-201ENST00000351205 CES1P23141 567 aa16.75■□□□□ 0.27
SMN1-201ENST00000351205 MPSTP25325 297 aa16.75■□□□□ 0.27
SMN1-201ENST00000351205 ARSDP51689 593 aa16.75■□□□□ 0.27
SMN1-201ENST00000351205 GBE1Q04446 702 aa16.75■□□□□ 0.27
SMN1-201ENST00000351205 NIPAL4Q0D2K0 466 aa16.75■□□□□ 0.27
SMN1-201ENST00000351205 ZNF761Q86XN6 746 aaPredicted RBP16.75■□□□□ 0.27
SMN1-201ENST00000351205 NRSN1Q8IZ57 195 aa16.75■□□□□ 0.27
SMN1-201ENST00000351205 LPCAT1Q8NF37 534 aa16.75■□□□□ 0.27
SMN1-201ENST00000351205 OR4D9Q8NGE8 314 aa16.75■□□□□ 0.27
SMN1-201ENST00000351205 EXD1Q8NHP7 514 aa16.75■□□□□ 0.27
SMN1-201ENST00000351205 EXTL1Q92935 676 aa16.75■□□□□ 0.27
SMN1-201ENST00000351205 FAF2Q96CS3 445 aa16.75■□□□□ 0.27
SMN1-201ENST00000351205 IQCDQ96DY2 449 aa16.75■□□□□ 0.27
SMN1-201ENST00000351205 PCDH9Q9HC56 1237 aa16.75■□□□□ 0.27
SMN1-201ENST00000351205 KCNK4Q9NYG8 393 aa16.75■□□□□ 0.27
SMN1-201ENST00000351205 TMEM9Q9P0T7 183 aa16.75■□□□□ 0.27
SMN1-201ENST00000351205 CTTNBP2NLQ9P2B4 639 aa16.75■□□□□ 0.27
SMN1-201ENST00000351205 DNPEPQ9ULA0 475 aa16.75■□□□□ 0.27
SMN1-201ENST00000351205 PCYT1BQ9Y5K3 369 aaPredicted RBP16.75■□□□□ 0.27
SMN1-201ENST00000351205 SPTA1P02549 2419 aa16.74■□□□□ 0.27
SMN1-201ENST00000351205 TRBV23OR9-2A0A075B6M9 112 aa16.74■□□□□ 0.27
SMN1-201ENST00000351205 STMND1H3BQB6 276 aa16.74■□□□□ 0.27
SMN1-201ENST00000351205 PROSCO94903 275 aa16.74■□□□□ 0.27
SMN1-201ENST00000351205 ASMTLO95671 621 aa16.74■□□□□ 0.27
SMN1-201ENST00000351205 EML2O95834 649 aa16.74■□□□□ 0.27
SMN1-201ENST00000351205 ATP1A1P05023 1023 aaKnown RBP16.74■□□□□ 0.27
SMN1-201ENST00000351205 THRAP10827 490 aa16.74■□□□□ 0.27
SMN1-201ENST00000351205 CA4P22748 312 aa16.74■□□□□ 0.27
SMN1-201ENST00000351205 FASLGP48023 281 aa16.74■□□□□ 0.27
SMN1-201ENST00000351205 SQSTM1Q13501 440 aa16.74■□□□□ 0.27
SMN1-201ENST00000351205 TRA2AQ13595 282 aaKnown RBP eCLIP16.74■□□□□ 0.27
SMN1-201ENST00000351205 LRP8Q14114 963 aa16.74■□□□□ 0.27
SMN1-201ENST00000351205 PDK2Q15119 407 aa16.74■□□□□ 0.27
SMN1-201ENST00000351205 PQLC3Q8N755 202 aa16.74■□□□□ 0.27
SMN1-201ENST00000351205 SLC37A2Q8TED4 501 aa16.74■□□□□ 0.27
SMN1-201ENST00000351205 JPH3Q8WXH2 748 aaPredicted RBP16.74■□□□□ 0.27
SMN1-201ENST00000351205 TAAR9Q96RI9 348 aa16.74■□□□□ 0.27
SMN1-201ENST00000351205 LYSMD1Q96S90 227 aa16.74■□□□□ 0.27
SMN1-201ENST00000351205 HAUS2Q9NVX0 235 aa16.74■□□□□ 0.27
SMN1-201ENST00000351205 OAS3Q9Y6K5 1087 aaKnown RBP16.74■□□□□ 0.27
SMN1-201ENST00000351205 C1orf232A0A0U1RR37 186 aa16.73■□□□□ 0.27
SMN1-201ENST00000351205 PYCARD-AS1I3L0S3 204 aa16.73■□□□□ 0.27
SMN1-201ENST00000351205 SLC28A2O43868 658 aa16.73■□□□□ 0.27
SMN1-201ENST00000351205 DNAJC6O75061 913 aa16.73■□□□□ 0.27
SMN1-201ENST00000351205 CASP14P31944 242 aa16.73■□□□□ 0.27
SMN1-201ENST00000351205 RPL26P61254 145 aaKnown RBP16.73■□□□□ 0.27
SMN1-201ENST00000351205 CYP4F2P78329 520 aa16.73■□□□□ 0.27
SMN1-201ENST00000351205 GPLD1P80108 840 aa16.73■□□□□ 0.27
SMN1-201ENST00000351205 SLC10A2Q12908 348 aaPredicted RBP16.73■□□□□ 0.27
SMN1-201ENST00000351205 MAP7D3Q8IWC1 876 aa16.73■□□□□ 0.27
SMN1-201ENST00000351205 RAVER1Q8IY67 606 aaKnown RBP16.73■□□□□ 0.27
SMN1-201ENST00000351205 SFRP1Q8N474 314 aa16.73■□□□□ 0.27
SMN1-201ENST00000351205 ZSCAN1Q8NBB4 408 aa16.73■□□□□ 0.27
SMN1-201ENST00000351205 AGBL5Q8NDL9 886 aa16.73■□□□□ 0.27
SMN1-201ENST00000351205 WDR24Q96S15 920 aa16.73■□□□□ 0.27
SMN1-201ENST00000351205 ARHGAP9Q9BRR9 750 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms