RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 PHGDHO43175 533 aaKnown RBP14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 SPINT1O43278 529 aa14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ZWINTO95229 277 aa14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 MPOP05164 745 aa14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 C2P06681 752 aa14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 UGT1A6P19224 532 aa14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 CD72P21854 359 aa14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 UGT1A1P22309 533 aa14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 UGT1A4P22310 534 aa14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 CRHR1P34998 444 aa14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 CA5AP35218 305 aa14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 UGT1A3P35503 534 aa14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 UGT1A5P35504 534 aa14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 POLD2P49005 469 aa14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 TTPAP49638 278 aa14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 PTPN5P54829 565 aa14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 TAS2R39P59534 338 aa14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 POU4F1Q01851 419 aa14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ZNF460Q14592 562 aa14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 SEPT7Q16181 437 aaKnown RBP14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 HECTD2Q5U5R9 776 aa14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 KIAA1211LQ6NV74 962 aa14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 LVRNQ6Q4G3 990 aa14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ERN2Q76MJ5 926 aaKnown RBP14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 SNX20Q7Z614 316 aa14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 TAX1BP1Q86VP1 789 aa14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 CEP97Q8IW35 865 aa14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 KCNV2Q8TDN2 545 aa14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 DYDC1Q8WWB3 177 aa14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ATXN2LQ8WWM7 1075 aaKnown RBP14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 SCG3Q8WXD2 468 aaKnown RBP14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 LPGAT1Q92604 370 aa14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 WRAP53Q9BUR4 548 aaKnown RBP14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 MKS1Q9NXB0 559 aa14.68□□□□□ -0.06
CDK5RAP3-201ENST00000338399 TM9SF1O15321 606 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 MID1O15344 667 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 OR1I1O60431 355 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 RNASEH1O60930 286 aaKnown RBP14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ADAM23O75077 832 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ELFN1P0C7U0 828 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 STMN1P16949 149 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ITGALP20701 1170 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 FMO4P31512 558 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 SLC12A2P55011 1212 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 RAB10P61026 200 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 IRF9Q00978 393 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 CNTN1Q12860 1018 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 NFATC2Q13469 925 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 CST6Q15828 149 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 AARS2Q5JTZ9 985 aaKnown RBP14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ZNF549Q6P9A3 640 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 LIPIQ6XZB0 460 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ZNF398Q8TD17 642 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 CENPTQ96BT3 561 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 CABS1Q96KC9 395 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 FAM111AQ96PZ2 611 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 OLFM1Q99784 485 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 GABRG3Q99928 467 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 VWA7Q9Y334 891 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 PLXNB3Q9ULL4 1909 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 AREL1O15033 823 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 PFDN6O15212 129 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 HOXB2P14652 356 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ETV3P41162 512 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 P2RY2P41231 377 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 CSRP3P50461 194 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 MRPS21P82921 87 aaKnown RBP14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ELP6Q0PNE2 266 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 STARD3Q14849 445 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ZKSCAN8Q15776 578 aaPredicted RBP14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 RNF187Q5TA31 235 aaPredicted RBP14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 HHATQ5VTY9 493 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ZDHHC20Q5W0Z9 365 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 FAM45BPQ6NSW5 357 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 Q6ZVL8 140 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 SERPINA9Q86WD7 417 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 PLD6Q8N2A8 252 aaKnown RBP14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 FAM45AQ8TCE6 357 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 MSANTD3Q96H12 275 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 PLEKHG4BQ96PX9 1271 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 HDAC8Q9BY41 377 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ZNF358Q9NW07 568 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 DCDC2Q9UHG0 476 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 CRLS1Q9UJA2 301 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 TLK1Q9UKI8 766 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 VPS9D1Q9Y2B5 631 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 PLLPQ9Y342 182 aa14.67□□□□□ -0.06
CDK5RAP3-201ENST00000338399 PLXNA2O75051 1894 aa14.66□□□□□ -0.06
CDK5RAP3-201ENST00000338399 A6NNZ2 444 aa14.66□□□□□ -0.06
CDK5RAP3-201ENST00000338399 NEMP1O14524 444 aa14.66□□□□□ -0.06
CDK5RAP3-201ENST00000338399 SHOX2O60902 331 aaPredicted RBP14.66□□□□□ -0.06
CDK5RAP3-201ENST00000338399 GLRA3O75311 464 aa14.66□□□□□ -0.06
CDK5RAP3-201ENST00000338399 ASMTLO95671 621 aa14.66□□□□□ -0.06
CDK5RAP3-201ENST00000338399 SLC35E2BP0CK96 405 aa14.66□□□□□ -0.06
CDK5RAP3-201ENST00000338399 COL9A1P20849 921 aa14.66□□□□□ -0.06
CDK5RAP3-201ENST00000338399 CRABP2P29373 138 aa14.66□□□□□ -0.06
CDK5RAP3-201ENST00000338399 LSP1P33241 339 aa14.66□□□□□ -0.06
CDK5RAP3-201ENST00000338399 DRD3P35462 400 aa14.66□□□□□ -0.06
CDK5RAP3-201ENST00000338399 LIG3P49916 1009 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms