RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 PFDN1O60925 122 aa6.27□□□□□ -1.4
PRKDC-202ENST00000338368 DEAF1O75398 565 aaPredicted RBP6.27□□□□□ -1.4
PRKDC-202ENST00000338368 SCAPQ12770 1279 aa6.27□□□□□ -1.4
PRKDC-202ENST00000338368 PM20D1Q6GTS8 502 aa6.27□□□□□ -1.4
PRKDC-202ENST00000338368 SLC30A9Q6PML9 568 aa6.27□□□□□ -1.4
PRKDC-202ENST00000338368 HORMAD1Q86X24 394 aa6.27□□□□□ -1.4
PRKDC-202ENST00000338368 DSELQ8IZU8 1212 aa6.27□□□□□ -1.4
PRKDC-202ENST00000338368 PLD6Q8N2A8 252 aaKnown RBP6.27□□□□□ -1.4
PRKDC-202ENST00000338368 KREMEN2Q8NCW0 462 aa6.27□□□□□ -1.4
PRKDC-202ENST00000338368 ASZ1Q8WWH4 475 aa6.27□□□□□ -1.4
PRKDC-202ENST00000338368 TBCDQ9BTW9 1192 aa6.27□□□□□ -1.4
PRKDC-202ENST00000338368 UGT2B28Q9BY64 529 aa6.27□□□□□ -1.4
PRKDC-202ENST00000338368 TBC1D14Q9P2M4 693 aa6.27□□□□□ -1.4
PRKDC-202ENST00000338368 F8W810 466 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 ALOX15P16050 662 aaPredicted RBP6.27□□□□□ -1.41
PRKDC-202ENST00000338368 IMPDH1P20839 514 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 CACUL1Q86Y37 369 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 PQLC1Q8N2U9 271 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 DCBLD1Q8N8Z6 715 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 IL12RB2Q99665 862 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 HOPXQ9BPY8 73 aaPredicted RBP6.27□□□□□ -1.41
PRKDC-202ENST00000338368 BDH2Q9BUT1 245 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 ZNF556Q9HAH1 456 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 SH3BP4Q9P0V3 963 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 MARF1Q9Y4F3 1742 aaKnown RBP6.27□□□□□ -1.41
PRKDC-202ENST00000338368 GNG14A0A1W2PPG7 69 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 RALGPS1Q5JS13 557 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 C1orf50Q9BV19 199 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 WDR6Q9NNW5 1121 aaKnown RBP6.27□□□□□ -1.41
PRKDC-202ENST00000338368 SIX3O95343 332 aaPredicted RBP6.27□□□□□ -1.41
PRKDC-202ENST00000338368 CLPTM1O96005 669 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 C8AP07357 584 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 SLC7A2P52569 658 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 RAD23AP54725 363 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 DPYSQ14117 519 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 LYPLAL1Q5VWZ2 237 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 TRAPPC5Q8IUR0 188 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 FBXW8Q8N3Y1 598 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 TWIST2Q8WVJ9 160 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 KHSRPQ92945 711 aaKnown RBP eCLIP6.27□□□□□ -1.411e-6■■■□□ 18.8
PRKDC-202ENST00000338368 ZFP14Q9HCL3 533 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 CSNK1G1Q9HCP0 422 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 CACNA1SQ13698 1873 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 SLC28A1O00337 649 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 ATP6V1C1P21283 382 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 GRIA3P42263 894 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 CACNG1Q06432 222 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 PTPRCAPQ14761 206 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 TIGD2Q4W5G0 525 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 LRRC23Q53EV4 343 aaPredicted RBP6.27□□□□□ -1.41
PRKDC-202ENST00000338368 RTP2Q5QGT7 225 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 RBM20Q5T481 1227 aaKnown RBP6.27□□□□□ -1.41
PRKDC-202ENST00000338368 PAQR3Q6TCH7 311 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 ISLR2Q6UXK2 745 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 SERPINA9Q86WD7 417 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 CPNE9Q8IYJ1 553 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 ZNF296Q8WUU4 475 aaPredicted RBP6.27□□□□□ -1.41
PRKDC-202ENST00000338368 LPGAT1Q92604 370 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 PPP3R2Q96LZ3 170 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 TMLHEQ9NVH6 421 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 KPNA5O15131 536 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 ESR1P03372 595 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 CCT8P50990 548 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 AP5B1Q2VPB7 878 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 SEMA6AQ9H2E6 1030 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 IGFLR1Q9H665 355 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 INVSQ9Y283 1065 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 MYO5AQ9Y4I1 1855 aaKnown RBP6.27□□□□□ -1.41
PRKDC-202ENST00000338368 A0A1W2PQ67 120 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 DLX3O60479 287 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 PRKCGP05129 697 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 ZDHHC13Q8IUH4 622 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 SLC44A2Q8IWA5 706 aaPredicted RBP6.27□□□□□ -1.41
PRKDC-202ENST00000338368 MFSD1Q9H3U5 465 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 ELAC1Q9H777 363 aaKnown RBP6.27□□□□□ -1.41
PRKDC-202ENST00000338368 MIA3Q5JRA6 1907 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 OR4F21O95013 312 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 IL1BP01584 269 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 FTH1P02794 183 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 LCP2Q13094 533 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 TXNDC8Q6A555 127 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 MIEF1Q9NQG6 463 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 EGFL7Q9UHF1 273 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 EVPLQ92817 2033 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 CDC16Q13042 620 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 ZNF697Q5TEC3 545 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 SPATA19Q7Z5L4 167 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 MED8Q96G25 268 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 IGSF21Q96ID5 467 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 OSGEPL1Q9H4B0 414 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 CHCHD3Q9NX63 227 aaKnown RBP6.27□□□□□ -1.41
PRKDC-202ENST00000338368 PRKAG3Q9UGI9 489 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 TDRKHQ9Y2W6 561 aaKnown RBP6.27□□□□□ -1.41
PRKDC-202ENST00000338368 CLOCKO15516 846 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 MGEA5O60502 916 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 SNAP91O60641 907 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 ZNF682O95780 498 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 UGT2B4P06133 528 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 CSKP41240 450 aa6.27□□□□□ -1.41
PRKDC-202ENST00000338368 LPCAT4Q643R3 524 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms