RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 MYRFLQ96LU7 910 aa12.55□□□□□ -0.4
LIMK1-201ENST00000336180 PLEKHG4BQ96PX9 1271 aa12.55□□□□□ -0.4
LIMK1-201ENST00000336180 CCDC68Q9H2F9 335 aa12.55□□□□□ -0.4
LIMK1-201ENST00000336180 RC3H2Q9HBD1 1191 aaKnown RBP12.55□□□□□ -0.4
LIMK1-201ENST00000336180 COMMD10Q9Y6G5 202 aa12.55□□□□□ -0.4
LIMK1-201ENST00000336180 C1orf232A0A0U1RR37 186 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 HDAC3O15379 428 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 EPCAMP16422 314 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 ATP5F1P24539 256 aaPredicted RBP12.54□□□□□ -0.4
LIMK1-201ENST00000336180 CSRP3P50461 194 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 ZNF140P52738 457 aaPredicted RBP12.54□□□□□ -0.4
LIMK1-201ENST00000336180 LBX1P52954 281 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 SULT2A1Q06520 285 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 KRT72Q14CN4 511 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 DGKKQ5KSL6 1271 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 ASTLQ6HA08 431 aaPredicted RBP12.54□□□□□ -0.4
LIMK1-201ENST00000336180 KLC3Q6P597 504 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 HERC6Q8IVU3 1022 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 KDM1BQ8NB78 822 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 RAB3IL1Q8TBN0 382 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 CYB5D2Q8WUJ1 264 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 PTCD2Q8WV60 388 aaKnown RBP12.54□□□□□ -0.4
LIMK1-201ENST00000336180 NUDT8Q8WV74 236 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 RCN3Q96D15 328 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 IL1RL2Q9HB29 575 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 MRM3Q9HC36 420 aaKnown RBP12.54□□□□□ -0.4
LIMK1-201ENST00000336180 GMPR2Q9P2T1 348 aaKnown RBP12.54□□□□□ -0.4
LIMK1-201ENST00000336180 CIDEBQ9UHD4 219 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 MED16Q9Y2X0 877 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 C2orf81A6NN90 581 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 LEFTY2O00292 366 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 BTN3A1O00481 513 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 MTX2O75431 263 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 IPO13O94829 963 aaKnown RBP12.54□□□□□ -0.4
LIMK1-201ENST00000336180 COX4I1P13073 169 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 STC1P52823 247 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 FAM109BQ6ICB4 259 aaPredicted RBP12.54□□□□□ -0.4
LIMK1-201ENST00000336180 SDCCAG8Q86SQ7 713 aaPredicted RBP12.54□□□□□ -0.4
LIMK1-201ENST00000336180 TCEAL8Q8IYN2 117 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 PIAS4Q8N2W9 510 aaPredicted RBP12.54□□□□□ -0.4
LIMK1-201ENST00000336180 PCDH20Q8N6Y1 951 aaKnown RBP12.54□□□□□ -0.4
LIMK1-201ENST00000336180 EEF1AKMT1Q8WVE0 214 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 C3orf30Q96M34 536 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 ZSWIM3Q96MP5 696 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 HERC2P3Q9BVR0 1158 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 CRISPLD2Q9H0B8 497 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 RNPEPL1Q9HAU8 725 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 TBC1D30Q9Y2I9 924 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 WNT6Q9Y6F9 365 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 TRIOO75962 3097 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 TRIM16O95361 564 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 CRTAMO95727 393 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 GUCA1CO95843 209 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 IL1BP01584 269 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 TPBGLP0DKB5 382 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 PIK3R1P27986 724 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 BTKQ06187 659 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 SETMARQ53H47 684 aaPredicted RBP12.54□□□□□ -0.4
LIMK1-201ENST00000336180 DET1Q7L5Y6 550 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 DNAJC28Q9NX36 388 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 CCDC167Q9P0B6 97 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 CDYLQ9Y232 598 aa12.54□□□□□ -0.4
LIMK1-201ENST00000336180 A0A087X1B8 175 aa12.53□□□□□ -0.4
LIMK1-201ENST00000336180 TYW5A2RUC4 315 aaKnown RBP12.53□□□□□ -0.4
LIMK1-201ENST00000336180 TBX10O75333 385 aa12.53□□□□□ -0.4
LIMK1-201ENST00000336180 EZRP15311 586 aaKnown RBP12.53□□□□□ -0.4
LIMK1-201ENST00000336180 CD1DP15813 335 aa12.53□□□□□ -0.4
LIMK1-201ENST00000336180 LPOP22079 712 aaPredicted RBP12.53□□□□□ -0.4
LIMK1-201ENST00000336180 PITRM1Q5JRX3 1037 aa12.53□□□□□ -0.4
LIMK1-201ENST00000336180 CACUL1Q86Y37 369 aa12.53□□□□□ -0.4
LIMK1-201ENST00000336180 TMPRSS6Q8IU80 811 aa12.53□□□□□ -0.4
LIMK1-201ENST00000336180 DDIASQ8IXT1 998 aa12.53□□□□□ -0.4
LIMK1-201ENST00000336180 SPDYE1Q8NFV5 336 aaPredicted RBP12.53□□□□□ -0.4
LIMK1-201ENST00000336180 ZFYVE19Q96K21 471 aa12.53□□□□□ -0.4
LIMK1-201ENST00000336180 CDK5RAP1Q96SZ6 601 aaKnown RBP12.53□□□□□ -0.4
LIMK1-201ENST00000336180 ZBP1Q9H171 429 aa12.53□□□□□ -0.4
LIMK1-201ENST00000336180 MID1IP1Q9NPA3 183 aa12.53□□□□□ -0.4
LIMK1-201ENST00000336180 SAGE1Q9NXZ1 904 aa12.53□□□□□ -0.4
LIMK1-201ENST00000336180 AK5Q9Y6K8 562 aa12.53□□□□□ -0.4
LIMK1-201ENST00000336180 ZSCAN9O15535 394 aaPredicted RBP12.53□□□□□ -0.4
LIMK1-201ENST00000336180 ZNF37AP17032 561 aaPredicted RBP12.53□□□□□ -0.4
LIMK1-201ENST00000336180 ITGAXP20702 1163 aa12.53□□□□□ -0.4
LIMK1-201ENST00000336180 HLA-FP30511 346 aa12.53□□□□□ -0.4
LIMK1-201ENST00000336180 CPOXP36551 454 aa12.53□□□□□ -0.4
LIMK1-201ENST00000336180 PIK3CGP48736 1102 aa12.53□□□□□ -0.4
LIMK1-201ENST00000336180 PRKAA1Q13131 559 aa12.53□□□□□ -0.4
LIMK1-201ENST00000336180 FRG1Q14331 258 aaKnown RBP12.53□□□□□ -0.4
LIMK1-201ENST00000336180 UGT3A1Q6NUS8 523 aa12.53□□□□□ -0.4
LIMK1-201ENST00000336180 HJURPQ8NCD3 748 aaPredicted RBP12.53□□□□□ -0.4
LIMK1-201ENST00000336180 LKAAEAR1Q8TD35 194 aa12.53□□□□□ -0.4
LIMK1-201ENST00000336180 POF1BQ8WVV4 589 aa12.53□□□□□ -0.4
LIMK1-201ENST00000336180 NRG4Q8WWG1 115 aa12.53□□□□□ -0.4
LIMK1-201ENST00000336180 STMN2Q93045 179 aa12.53□□□□□ -0.4
LIMK1-201ENST00000336180 UBXN10Q96LJ8 280 aa12.53□□□□□ -0.4
LIMK1-201ENST00000336180 SLC39A3Q9BRY0 314 aa12.53□□□□□ -0.4
LIMK1-201ENST00000336180 ZDHHC6Q9H6R6 413 aa12.53□□□□□ -0.4
LIMK1-201ENST00000336180 RNF112Q9ULX5 631 aa12.53□□□□□ -0.4
LIMK1-201ENST00000336180 TRAFD1O14545 582 aaPredicted RBP12.52□□□□□ -0.4
LIMK1-201ENST00000336180 TLL1O43897 1013 aa12.52□□□□□ -0.4
LIMK1-201ENST00000336180 IMPDH2P12268 514 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms