RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 NLE1Q9NVX2 485 aaPredicted RBP23.3■■□□□ 1.32
NDEL1-201ENST00000334527 POLG2Q9UHN1 485 aa23.3■■□□□ 1.32
NDEL1-201ENST00000334527 SPO11Q9Y5K1 396 aa23.3■■□□□ 1.32
NDEL1-201ENST00000334527 NME4O00746 187 aa23.29■■□□□ 1.32
NDEL1-201ENST00000334527 ANGPT2O15123 496 aa23.29■■□□□ 1.32
NDEL1-201ENST00000334527 VILLO15195 856 aa23.29■■□□□ 1.32
NDEL1-201ENST00000334527 TIPRLO75663 272 aa23.29■■□□□ 1.32
NDEL1-201ENST00000334527 ATP6V1B2P21281 511 aa23.29■■□□□ 1.32
NDEL1-201ENST00000334527 HOXD9P28356 352 aaPredicted RBP23.29■■□□□ 1.32
NDEL1-201ENST00000334527 CLCQ05315 142 aa23.29■■□□□ 1.32
NDEL1-201ENST00000334527 PRKCZQ05513 592 aa23.29■■□□□ 1.32
NDEL1-201ENST00000334527 MRPL58Q14197 206 aaKnown RBP23.29■■□□□ 1.32
NDEL1-201ENST00000334527 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.29■■□□□ 1.32
NDEL1-201ENST00000334527 ALG1LQ6GMV1 187 aa23.29■■□□□ 1.32
NDEL1-201ENST00000334527 BBS5Q8N3I7 341 aa23.29■■□□□ 1.32
NDEL1-201ENST00000334527 FBXO39Q8N4B4 442 aa23.29■■□□□ 1.32
NDEL1-201ENST00000334527 PCSK9Q8NBP7 692 aaKnown RBP23.29■■□□□ 1.32
NDEL1-201ENST00000334527 TAS2R13Q9NYV9 303 aa23.29■■□□□ 1.32
NDEL1-201ENST00000334527 BRCA2P51587 3418 aa23.29■■□□□ 1.32
NDEL1-201ENST00000334527 GREB1Q4ZG55 1949 aa23.29■■□□□ 1.32
NDEL1-201ENST00000334527 A0A1B0GTL3 188 aa23.29■■□□□ 1.32
NDEL1-201ENST00000334527 MTMR11A4FU01 709 aa23.29■■□□□ 1.32
NDEL1-201ENST00000334527 HGFP14210 728 aa23.29■■□□□ 1.32
NDEL1-201ENST00000334527 LBPP18428 481 aa23.29■■□□□ 1.32
NDEL1-201ENST00000334527 ZNF140P52738 457 aaPredicted RBP23.29■■□□□ 1.32
NDEL1-201ENST00000334527 FAM189BP81408 668 aa23.29■■□□□ 1.32
NDEL1-201ENST00000334527 LCP2Q13094 533 aa23.29■■□□□ 1.32
NDEL1-201ENST00000334527 APOFQ13790 326 aa23.29■■□□□ 1.32
NDEL1-201ENST00000334527 USP41Q3LFD5 358 aa23.29■■□□□ 1.32
NDEL1-201ENST00000334527 FBXO48Q5FWF7 155 aa23.29■■□□□ 1.32
NDEL1-201ENST00000334527 CANT1Q8WVQ1 401 aa23.29■■□□□ 1.32
NDEL1-201ENST00000334527 SLC29A1Q99808 456 aa23.29■■□□□ 1.32
NDEL1-201ENST00000334527 HOPXQ9BPY8 73 aaPredicted RBP23.29■■□□□ 1.32
NDEL1-201ENST00000334527 MGME1Q9BQP7 344 aa23.29■■□□□ 1.32
NDEL1-201ENST00000334527 DERL2Q9GZP9 239 aa23.29■■□□□ 1.32
NDEL1-201ENST00000334527 CCDC68Q9H2F9 335 aa23.29■■□□□ 1.32
NDEL1-201ENST00000334527 SEMA4BQ9NPR2 832 aaPredicted RBP23.29■■□□□ 1.32
NDEL1-201ENST00000334527 IKZF3Q9UKT9 509 aa23.29■■□□□ 1.32
NDEL1-201ENST00000334527 CST5P28325 142 aaPredicted RBP23.28■■□□□ 1.32
NDEL1-201ENST00000334527 SETMARQ53H47 684 aaPredicted RBP23.28■■□□□ 1.32
NDEL1-201ENST00000334527 RNF19BQ6ZMZ0 732 aa23.28■■□□□ 1.32
NDEL1-201ENST00000334527 OR4K2Q8NGD2 314 aa23.28■■□□□ 1.32
NDEL1-201ENST00000334527 GIPC2Q8TF65 315 aa23.28■■□□□ 1.32
NDEL1-201ENST00000334527 RMDN1Q96DB5 314 aa23.28■■□□□ 1.32
NDEL1-201ENST00000334527 OSBPL11Q9BXB4 747 aa23.28■■□□□ 1.32
NDEL1-201ENST00000334527 MED16Q9Y2X0 877 aa23.28■■□□□ 1.32
NDEL1-201ENST00000334527 RNF11Q9Y3C5 154 aa23.28■■□□□ 1.32
NDEL1-201ENST00000334527 PRKAR2AP13861 404 aaKnown RBP23.28■■□□□ 1.32
NDEL1-201ENST00000334527 SLC6A4P31645 630 aa23.28■■□□□ 1.32
NDEL1-201ENST00000334527 RGRP47804 291 aa23.28■■□□□ 1.32
NDEL1-201ENST00000334527 CREB5Q02930 508 aa23.28■■□□□ 1.32
NDEL1-201ENST00000334527 GNA12Q03113 381 aa23.28■■□□□ 1.32
NDEL1-201ENST00000334527 RPS6KA2Q15349 733 aa23.28■■□□□ 1.32
NDEL1-201ENST00000334527 TSNQ15631 228 aaKnown RBP23.28■■□□□ 1.32
NDEL1-201ENST00000334527 PRMT9Q6P2P2 845 aa23.28■■□□□ 1.32
NDEL1-201ENST00000334527 GLT6D1Q7Z4J2 308 aa23.28■■□□□ 1.32
NDEL1-201ENST00000334527 EXOC2Q96KP1 924 aa23.28■■□□□ 1.32
NDEL1-201ENST00000334527 NSMCE3Q96MG7 304 aa23.28■■□□□ 1.32
NDEL1-201ENST00000334527 SPON2Q9BUD6 331 aa23.28■■□□□ 1.32
NDEL1-201ENST00000334527 CINPQ9BW66 212 aaPredicted RBP23.28■■□□□ 1.32
NDEL1-201ENST00000334527 ABCD2Q9UBJ2 740 aa23.28■■□□□ 1.32
NDEL1-201ENST00000334527 SEPT3Q9UH03 358 aa23.28■■□□□ 1.32
NDEL1-201ENST00000334527 CCDC160A6NGH7 325 aa23.27■■□□□ 1.32
NDEL1-201ENST00000334527 MOXD2PA6NHM9 499 aa23.27■■□□□ 1.32
NDEL1-201ENST00000334527 AKAP10O43572 662 aa23.27■■□□□ 1.32
NDEL1-201ENST00000334527 CRCPO75575 148 aa23.27■■□□□ 1.32
NDEL1-201ENST00000334527 TXNL4AP83876 142 aaKnown RBP23.27■■□□□ 1.32
NDEL1-201ENST00000334527 RAD51Q06609 339 aa23.27■■□□□ 1.32
NDEL1-201ENST00000334527 CAPRIN1Q14444 709 aaKnown RBP23.27■■□□□ 1.32
NDEL1-201ENST00000334527 TRAF7Q6Q0C0 670 aa23.27■■□□□ 1.32
NDEL1-201ENST00000334527 AFTPHQ6ULP2 937 aa23.27■■□□□ 1.32
NDEL1-201ENST00000334527 MYO1HQ8N1T3 1032 aa23.27■■□□□ 1.32
NDEL1-201ENST00000334527 FAM110BQ8TC76 370 aa23.27■■□□□ 1.32
NDEL1-201ENST00000334527 SPATA17Q96L03 361 aa23.27■■□□□ 1.32
NDEL1-201ENST00000334527 MAGEH1Q9H213 219 aa23.27■■□□□ 1.32
NDEL1-201ENST00000334527 SDR39U1Q9NRG7 319 aaPredicted RBP23.27■■□□□ 1.32
NDEL1-201ENST00000334527 NDUFS3O75489 264 aa23.27■■□□□ 1.32
NDEL1-201ENST00000334527 ECI2O75521 394 aa23.27■■□□□ 1.32
NDEL1-201ENST00000334527 VNN2O95498 520 aa23.27■■□□□ 1.32
NDEL1-201ENST00000334527 SLC10A3P09131 477 aa23.27■■□□□ 1.32
NDEL1-201ENST00000334527 SCNN1BP51168 640 aa23.27■■□□□ 1.32
NDEL1-201ENST00000334527 KPNA1P52294 538 aaPredicted RBP23.27■■□□□ 1.32
NDEL1-201ENST00000334527 SH3BGRP55822 239 aaPredicted RBP23.27■■□□□ 1.32
NDEL1-201ENST00000334527 ECT2LQ008S8 904 aa23.27■■□□□ 1.32
NDEL1-201ENST00000334527 CYTH1Q15438 398 aa23.27■■□□□ 1.32
NDEL1-201ENST00000334527 MYLK3Q32MK0 819 aa23.27■■□□□ 1.32
NDEL1-201ENST00000334527 RSPO2Q6UXX9 243 aaPredicted RBP23.27■■□□□ 1.32
NDEL1-201ENST00000334527 SAPCD2Q86UD0 394 aa23.27■■□□□ 1.32
NDEL1-201ENST00000334527 MINDY1Q8N5J2 469 aa23.27■■□□□ 1.32
NDEL1-201ENST00000334527 ARMC1Q9NVT9 282 aa23.27■■□□□ 1.32
NDEL1-201ENST00000334527 LCHNA4D1U4 455 aa23.26■■□□□ 1.31
NDEL1-201ENST00000334527 CDC7O00311 574 aa23.26■■□□□ 1.31
NDEL1-201ENST00000334527 MATN4O95460 622 aa23.26■■□□□ 1.31
NDEL1-201ENST00000334527 ANKS6Q68DC2 871 aa23.26■■□□□ 1.31
NDEL1-201ENST00000334527 KLHDC10Q6PID8 442 aa23.26■■□□□ 1.31
NDEL1-201ENST00000334527 SLC15A3Q8IY34 581 aa23.26■■□□□ 1.31
NDEL1-201ENST00000334527 DDI1Q8WTU0 396 aa23.26■■□□□ 1.31
NDEL1-201ENST00000334527 ZUFSPQ96AP4 578 aa23.26■■□□□ 1.31
NDEL1-201ENST00000334527 GPR21Q99679 349 aa23.26■■□□□ 1.31
NDEL1-201ENST00000334527 TMEM79Q9BSE2 394 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms