RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 MRPL17Q9NRX2 175 aaKnown RBP15.44■□□□□ 0.06
HCFC1-201ENST00000310441 ARHGAP20Q9P2F6 1191 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 FBXO9Q9UK97 447 aaPredicted RBP15.44■□□□□ 0.06
HCFC1-201ENST00000310441 TFR2Q9UP52 801 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 NCANO14594 1321 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 UBA1P22314 1058 aaKnown RBP15.44■□□□□ 0.06
HCFC1-201ENST00000310441 MAMLD1Q13495 774 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 SNAPC1Q16533 368 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 KLHL26Q53HC5 615 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 PRR23CQ6ZRP0 262 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 OR4C6Q8NH72 309 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 SNX33Q8WV41 574 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 TATDN2Q93075 761 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 OSMRQ99650 979 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 DNAJC18Q9H819 358 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 RC3H2Q9HBD1 1191 aaKnown RBP15.44■□□□□ 0.06
HCFC1-201ENST00000310441 PCDHGB2Q9Y5G2 931 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 A0A0G2JPF8 293 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 HNRNPCL3B7ZW38 293 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 MATN2O00339 956 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 HNRNPCL4P0DMR1 293 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 COL6A2P12110 1019 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 AMPD1P23109 780 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 FBXL16Q8N461 479 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 GPATCH2LQ9NWQ4 482 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 MAT2BQ9NZL9 334 aa15.44■□□□□ 0.06
HCFC1-201ENST00000310441 CEMIPQ8WUJ3 1361 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 ELFN1P0C7U0 828 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 HNF4AP41235 474 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 IFNLR1Q8IU57 520 aaPredicted RBP15.43■□□□□ 0.06
HCFC1-201ENST00000310441 OR2T12Q8NG77 320 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 LRRC19Q9H756 370 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 KCNQ5Q9NR82 932 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 SETD4Q9NVD3 440 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.43■□□□□ 0.06
HCFC1-201ENST00000310441 SNTG2Q9NY99 539 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 OR7A10O76100 309 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 GPIP06744 558 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 CBX3Q13185 183 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 RAB2BQ8WUD1 216 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 ADARB2Q9NS39 739 aaKnown RBP15.43■□□□□ 0.06
HCFC1-201ENST00000310441 SMPD3Q9NY59 655 aaPredicted RBP15.43■□□□□ 0.06
HCFC1-201ENST00000310441 ICE1Q9Y2F5 2266 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 DNTTP04053 509 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 USP43Q70EL4 1123 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 ABHD16BQ9H3Z7 469 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 A0A087X0B3 334 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 SLC22A2O15244 555 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 ITGA2BP08514 1039 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 THAP5Q7Z6K1 395 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 SYVN1Q86TM6 617 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 OR4L1Q8NH43 312 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 EBNA1BP2Q99848 306 aaKnown RBP15.43■□□□□ 0.06
HCFC1-201ENST00000310441 ZDHHC4Q9NPG8 344 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 PTGS2P35354 604 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 GRIN3AQ8TCU5 1115 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 PREX1Q8TCU6 1659 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 NRCAMQ92823 1304 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 FMN2Q9NZ56 1722 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 CACNA1CQ13936 2221 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 PER2O15055 1255 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 TRUB2O95900 331 aaKnown RBP15.43■□□□□ 0.06
HCFC1-201ENST00000310441 FABP3P05413 133 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 PVALBP20472 110 aaPredicted RBP15.43■□□□□ 0.06
HCFC1-201ENST00000310441 PRDX6P30041 224 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 GALNTL5Q7Z4T8 443 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 PCDH20Q8N6Y1 951 aaKnown RBP15.43■□□□□ 0.06
HCFC1-201ENST00000310441 CLIP3Q96DZ5 547 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 CLPTM1LQ96KA5 538 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 HIST1H2AAQ96QV6 131 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 ZNF347Q96SE7 839 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 LACRTQ9GZZ8 138 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 SPATC1LQ9H0A9 340 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 ACSS3Q9H6R3 686 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 TMEM134Q9H6X4 195 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 CYP1A2P05177 515 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 TIE1P35590 1138 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 GNALP38405 381 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 ANTXR2P58335 489 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 ARMC10Q8N2F6 343 aa15.43■□□□□ 0.06
HCFC1-201ENST00000310441 THUMPD1Q9NXG2 353 aaKnown RBP15.43■□□□□ 0.06
HCFC1-201ENST00000310441 TTMPQ5BVD1 217 aa15.42■□□□□ 0.06
HCFC1-201ENST00000310441 FDXACB1Q9BRP7 624 aaPredicted RBP15.42■□□□□ 0.06
HCFC1-201ENST00000310441 CCDC86Q9H6F5 360 aaKnown RBP15.42■□□□□ 0.06
HCFC1-201ENST00000310441 PLCL2Q9UPR0 1127 aa15.42■□□□□ 0.06
HCFC1-201ENST00000310441 DISP2A7MBM2 1401 aa15.42■□□□□ 0.06
HCFC1-201ENST00000310441 USP31Q70CQ4 1352 aa15.42■□□□□ 0.06
HCFC1-201ENST00000310441 FPGTO14772 594 aa15.42■□□□□ 0.06
HCFC1-201ENST00000310441 ASLP04424 464 aa15.42■□□□□ 0.06
HCFC1-201ENST00000310441 MTHFD1P11586 935 aaKnown RBP15.42■□□□□ 0.06
HCFC1-201ENST00000310441 MAPK10P53779 464 aa15.42■□□□□ 0.06
HCFC1-201ENST00000310441 DNAJB8Q8NHS0 232 aa15.42■□□□□ 0.06
HCFC1-201ENST00000310441 ROPN1LQ96C74 230 aa15.42■□□□□ 0.06
HCFC1-201ENST00000310441 NXPE2Q96DL1 559 aa15.42■□□□□ 0.06
HCFC1-201ENST00000310441 CTDNEP1O95476 244 aa15.42■□□□□ 0.06
HCFC1-201ENST00000310441 CDKL1Q00532 357 aa15.42■□□□□ 0.06
HCFC1-201ENST00000310441 GCNT6Q5T4J0 391 aa15.42■□□□□ 0.06
HCFC1-201ENST00000310441 HASPINQ8TF76 798 aa15.42■□□□□ 0.06
HCFC1-201ENST00000310441 PRICKLE1Q96MT3 831 aaPredicted RBP15.42■□□□□ 0.06
HCFC1-201ENST00000310441 LSM1O15116 133 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms