RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 FRA10AC1Q70Z53 315 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 HAPLN3Q96S86 360 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 NOL6Q9H6R4 1146 aaKnown RBP14.55□□□□□ -0.08
PTPN9-201ENST00000306726 OGDHLQ9ULD0 1010 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 MBLAC1A4D2B0 266 aaPredicted RBP14.54□□□□□ -0.08
PTPN9-201ENST00000306726 TTC36A6NLP5 189 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 TMEM114B3SHH9 223 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 FBP2O00757 339 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 NDUFS3O75489 264 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 LDLRP01130 860 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 PRDX3P30048 256 aaKnown RBP14.54□□□□□ -0.08
PTPN9-201ENST00000306726 SLC10A7Q0GE19 358 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 TWF1Q12792 350 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 FRG1Q14331 258 aaKnown RBP14.54□□□□□ -0.08
PTPN9-201ENST00000306726 ATP6AP1LQ52LC2 224 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 CCSAPQ6IQ19 270 aaPredicted RBP14.54□□□□□ -0.08
PTPN9-201ENST00000306726 C4orf22Q6V702 233 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 TIFABQ6ZNK6 161 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 PIWIL4Q7Z3Z4 852 aaKnown RBP14.54□□□□□ -0.08
PTPN9-201ENST00000306726 AHI1Q8N157 1196 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 OR2T34Q8NGX1 318 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 OR2T3Q8NH03 318 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 GBA3Q9H227 469 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 DNAJB4Q9UDY4 337 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 K7EPI3 171 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 M0R3G1 203 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 NPY2RP49146 381 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 LIPEQ05469 1076 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 PAGE2BQ5JRK9 111 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 RAP1GAP2Q684P5 730 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 RETREG3Q86VR2 466 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 CAMK1DQ8IU85 385 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 LZTR1Q8N653 840 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 TWIST2Q8WVJ9 160 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 HPS1Q92902 700 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 MRPL57Q9BQC6 102 aaKnown RBP14.54□□□□□ -0.08
PTPN9-201ENST00000306726 TMEM30AQ9NV96 361 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 VTI1BQ9UEU0 232 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 TRIM43BA6NCK2 446 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 M0QZ92 97 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 TLR5O60602 858 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 APOA4P06727 396 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 MLNP12872 115 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 ZNF37AP17032 561 aaPredicted RBP14.54□□□□□ -0.08
PTPN9-201ENST00000306726 HSPA13P48723 471 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 ACLYP53396 1101 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 TSNQ15631 228 aaKnown RBP14.54□□□□□ -0.08
PTPN9-201ENST00000306726 KCNA10Q16322 511 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 PSMD5Q16401 504 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 CYP2A13Q16696 494 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 LHX8Q68G74 356 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 STRADAQ7RTN6 431 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 MUS81Q96NY9 551 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 VPS45Q9NRW7 570 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 SLC27A5Q9Y2P5 690 aa14.54□□□□□ -0.08
PTPN9-201ENST00000306726 ASGR1P07306 291 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 CNPP09543 421 aaKnown RBP14.53□□□□□ -0.08
PTPN9-201ENST00000306726 NUP107P57740 925 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 UFM1P61960 85 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 RHDQ02161 417 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 DMPKQ09013 629 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 CMPK2Q5EBM0 449 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 SLC2A7Q6PXP3 512 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 GCNT7Q6ZNI0 430 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 C14orf80Q86SX3 495 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 FAM126BQ8IXS8 530 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 RDH11Q8TC12 318 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 PNPT1Q8TCS8 783 aaKnown RBP14.53□□□□□ -0.08
PTPN9-201ENST00000306726 FAM162AQ96A26 154 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 MYLPFQ96A32 169 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 SEMA3CQ99985 751 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 RNF208Q9H0X6 261 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 GLOD4Q9HC38 313 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 ABCB10Q9NRK6 738 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 INTS7Q9NVH2 962 aaKnown RBP14.53□□□□□ -0.08
PTPN9-201ENST00000306726 GALPQ9UBC7 116 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 VPS51Q9UID3 782 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 AAR2Q9Y312 384 aaKnown RBP14.53□□□□□ -0.08
PTPN9-201ENST00000306726 FRMPD3Q5JV73 1810 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 CCDC154A6NI56 674 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 ANXA9O76027 345 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 CD4P01730 458 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 MERTKQ12866 999 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 HNRNPDQ14103 355 aaKnown RBP14.53□□□□□ -0.08
PTPN9-201ENST00000306726 METTL21CQ5VZV1 264 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 PSMG2Q969U7 264 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 ASB9Q96DX5 294 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 SMAD5Q99717 465 aaKnown RBP14.53□□□□□ -0.08
PTPN9-201ENST00000306726 TMEM106CQ9BVX2 250 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 MUC3BQ9H195 1237 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 STN1Q9H668 368 aaKnown RBP14.53□□□□□ -0.08
PTPN9-201ENST00000306726 IPPQ9Y573 584 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 NME4O00746 187 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 CHEK2O96017 543 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 HSMCR30P0CW71 290 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 HMOX2P30519 316 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 POU4F1Q01851 419 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 MARC1Q5VT66 337 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 IL27RAQ6UWB1 636 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 CMTR2Q8IYT2 770 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms