RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 SLC35E2BP0CK96 405 aa17.45■□□□□ 0.38
KRT28-201ENST00000306658 PTGER3P43115 390 aa17.45■□□□□ 0.38
KRT28-201ENST00000306658 KIR2DL1P43626 348 aaPredicted RBP17.45■□□□□ 0.38
KRT28-201ENST00000306658 CDKN1CP49918 316 aaPredicted RBP17.45■□□□□ 0.38
KRT28-201ENST00000306658 SEC24CP53992 1094 aa17.45■□□□□ 0.38
KRT28-201ENST00000306658 NFATC2Q13469 925 aa17.45■□□□□ 0.38
KRT28-201ENST00000306658 SMAD2Q15796 467 aaKnown RBP17.45■□□□□ 0.38
KRT28-201ENST00000306658 PDK4Q16654 411 aa17.45■□□□□ 0.38
KRT28-201ENST00000306658 CCDC153Q494R4 210 aa17.45■□□□□ 0.38
KRT28-201ENST00000306658 N4BP2L1Q5TBK1 243 aaPredicted RBP17.45■□□□□ 0.38
KRT28-201ENST00000306658 DPPA4Q7L190 304 aa17.45■□□□□ 0.38
KRT28-201ENST00000306658 CLEC14AQ86T13 490 aa17.45■□□□□ 0.38
KRT28-201ENST00000306658 CEP97Q8IW35 865 aa17.45■□□□□ 0.38
KRT28-201ENST00000306658 ARMC2Q8NEN0 867 aa17.45■□□□□ 0.38
KRT28-201ENST00000306658 ZNF398Q8TD17 642 aa17.45■□□□□ 0.38
KRT28-201ENST00000306658 LPGAT1Q92604 370 aa17.45■□□□□ 0.38
KRT28-201ENST00000306658 ZDHHC4Q9NPG8 344 aa17.45■□□□□ 0.38
KRT28-201ENST00000306658 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.45■□□□□ 0.38
KRT28-201ENST00000306658 SYNCRIPO60506 623 aaKnown RBP17.45■□□□□ 0.38
KRT28-201ENST00000306658 RNASEH1O60930 286 aaKnown RBP17.45■□□□□ 0.38
KRT28-201ENST00000306658 TIE1P35590 1138 aa17.45■□□□□ 0.38
KRT28-201ENST00000306658 SPINT3P49223 89 aa17.45■□□□□ 0.38
KRT28-201ENST00000306658 ADARP55265 1226 aaKnown RBP17.45■□□□□ 0.38
KRT28-201ENST00000306658 PFKPQ01813 784 aa17.45■□□□□ 0.38
KRT28-201ENST00000306658 ELP6Q0PNE2 266 aa17.45■□□□□ 0.38
KRT28-201ENST00000306658 GRSF1Q12849 480 aaKnown RBP eCLIP17.45■□□□□ 0.38
KRT28-201ENST00000306658 SDE2Q6IQ49 451 aa17.45■□□□□ 0.38
KRT28-201ENST00000306658 TXNDC11Q6PKC3 985 aa17.45■□□□□ 0.38
KRT28-201ENST00000306658 Q7L0L9 218 aa17.45■□□□□ 0.38
KRT28-201ENST00000306658 MMAAQ8IVH4 418 aaKnown RBP17.45■□□□□ 0.38
KRT28-201ENST00000306658 CCDC63Q8NA47 563 aa17.45■□□□□ 0.38
KRT28-201ENST00000306658 GPR26Q8NDV2 337 aa17.45■□□□□ 0.38
KRT28-201ENST00000306658 CDH19Q9H159 772 aa17.45■□□□□ 0.38
KRT28-201ENST00000306658 HEBP1Q9NRV9 189 aa17.45■□□□□ 0.38
KRT28-201ENST00000306658 COMMD10Q9Y6G5 202 aa17.45■□□□□ 0.38
KRT28-201ENST00000306658 SCN8AQ9UQD0 1980 aa17.44■□□□□ 0.38
KRT28-201ENST00000306658 GAPDHSO14556 408 aaPredicted RBP17.44■□□□□ 0.38
KRT28-201ENST00000306658 TOP3BO95985 862 aaKnown RBP17.44■□□□□ 0.38
KRT28-201ENST00000306658 VIMP08670 466 aaKnown RBP17.44■□□□□ 0.38
KRT28-201ENST00000306658 C1SP09871 688 aa17.44■□□□□ 0.38
KRT28-201ENST00000306658 GLULP15104 373 aa17.44■□□□□ 0.38
KRT28-201ENST00000306658 DRD1P21728 446 aa17.44■□□□□ 0.38
KRT28-201ENST00000306658 MMP12P39900 470 aa17.44■□□□□ 0.38
KRT28-201ENST00000306658 SERPINB4P48594 390 aa17.44■□□□□ 0.38
KRT28-201ENST00000306658 SEC13P55735 322 aa17.44■□□□□ 0.38
KRT28-201ENST00000306658 CAMK2GQ13555 558 aaPredicted RBP17.44■□□□□ 0.38
KRT28-201ENST00000306658 ZNF549Q6P9A3 640 aa17.44■□□□□ 0.38
KRT28-201ENST00000306658 TBC1D1Q86TI0 1168 aaPredicted RBP17.44■□□□□ 0.38
KRT28-201ENST00000306658 BCAS4Q8TDM0 211 aa17.44■□□□□ 0.38
KRT28-201ENST00000306658 LRRC8CQ8TDW0 803 aa17.44■□□□□ 0.38
KRT28-201ENST00000306658 ARRDC3Q96B67 414 aa17.44■□□□□ 0.38
KRT28-201ENST00000306658 ZNF317Q96PQ6 595 aaPredicted RBP17.44■□□□□ 0.38
KRT28-201ENST00000306658 OLFM1Q99784 485 aa17.44■□□□□ 0.38
KRT28-201ENST00000306658 AARSD1Q9BTE6 412 aaKnown RBP17.44■□□□□ 0.38
KRT28-201ENST00000306658 GPAMQ9HCL2 828 aa17.44■□□□□ 0.38
KRT28-201ENST00000306658 CRLS1Q9UJA2 301 aa17.44■□□□□ 0.38
KRT28-201ENST00000306658 ZNF106Q9H2Y7 1883 aaKnown RBP17.43■□□□□ 0.38
KRT28-201ENST00000306658 MYO10Q9HD67 2058 aa17.43■□□□□ 0.38
KRT28-201ENST00000306658 TRBV5-4A0A0C4DH59 114 aa17.43■□□□□ 0.38
KRT28-201ENST00000306658 WDR91A4D1P6 747 aa17.43■□□□□ 0.38
KRT28-201ENST00000306658 RGSL1A5PLK6 1076 aa17.43■□□□□ 0.38
KRT28-201ENST00000306658 ANTXRLA6NF34 631 aa17.43■□□□□ 0.38
KRT28-201ENST00000306658 TCP11X1B4DZS4 312 aa17.43■□□□□ 0.38
KRT28-201ENST00000306658 H0Y858 1186 aa17.43■□□□□ 0.38
KRT28-201ENST00000306658 BIRC5O15392 142 aa17.43■□□□□ 0.38
KRT28-201ENST00000306658 PLIN3O60664 434 aa17.43■□□□□ 0.38
KRT28-201ENST00000306658 NEFHP12036 1026 aa17.43■□□□□ 0.38
KRT28-201ENST00000306658 ZNF7P17097 686 aaPredicted RBP17.43■□□□□ 0.38
KRT28-201ENST00000306658 FMO4P31512 558 aa17.43■□□□□ 0.38
KRT28-201ENST00000306658 SLC26A3P40879 764 aa17.43■□□□□ 0.38
KRT28-201ENST00000306658 WASP42768 502 aa17.43■□□□□ 0.38
KRT28-201ENST00000306658 KPNA2P52292 529 aaKnown RBP17.43■□□□□ 0.38
KRT28-201ENST00000306658 CDKN2DP55273 166 aa17.43■□□□□ 0.38
KRT28-201ENST00000306658 IRF9Q00978 393 aa17.43■□□□□ 0.38
KRT28-201ENST00000306658 ITGA9Q13797 1035 aa17.43■□□□□ 0.38
KRT28-201ENST00000306658 PON2Q15165 354 aa17.43■□□□□ 0.38
KRT28-201ENST00000306658 CHRNA6Q15825 494 aa17.43■□□□□ 0.38
KRT28-201ENST00000306658 TSNAXIP1Q2TAA8 658 aa17.43■□□□□ 0.38
KRT28-201ENST00000306658 LEXMQ3ZCV2 418 aa17.43■□□□□ 0.38
KRT28-201ENST00000306658 TMEM196Q5HYL7 178 aa17.43■□□□□ 0.38
KRT28-201ENST00000306658 C16orf46Q6P387 395 aa17.43■□□□□ 0.38
KRT28-201ENST00000306658 RGS9BPQ6ZS82 235 aa17.43■□□□□ 0.38
KRT28-201ENST00000306658 SERPINA9Q86WD7 417 aa17.43■□□□□ 0.38
KRT28-201ENST00000306658 TRIM42Q8IWZ5 723 aa17.43■□□□□ 0.38
KRT28-201ENST00000306658 RAVER1Q8IY67 606 aaKnown RBP17.43■□□□□ 0.38
KRT28-201ENST00000306658 PLD6Q8N2A8 252 aaKnown RBP17.43■□□□□ 0.38
KRT28-201ENST00000306658 EZH1Q92800 747 aaPredicted RBP17.43■□□□□ 0.38
KRT28-201ENST00000306658 POPDC3Q9HBV1 291 aa17.43■□□□□ 0.38
KRT28-201ENST00000306658 TAS2R13Q9NYV9 303 aa17.43■□□□□ 0.38
KRT28-201ENST00000306658 TMEM216Q9P0N5 145 aa17.43■□□□□ 0.38
KRT28-201ENST00000306658 FAM50BQ9Y247 325 aa17.43■□□□□ 0.38
KRT28-201ENST00000306658 SPTBN5Q9NRC6 3674 aaKnown RBP17.43■□□□□ 0.38
KRT28-201ENST00000306658 GOLGA8CPA6NN73 597 aa17.42■□□□□ 0.38
KRT28-201ENST00000306658 AGAP14A8MT82 685 aa17.42■□□□□ 0.38
KRT28-201ENST00000306658 PSMD11O00231 422 aa17.42■□□□□ 0.38
KRT28-201ENST00000306658 KLHL2O95198 593 aa17.42■□□□□ 0.38
KRT28-201ENST00000306658 FAM107AO95990 144 aa17.42■□□□□ 0.38
KRT28-201ENST00000306658 ESR1P03372 595 aa17.42■□□□□ 0.38
KRT28-201ENST00000306658 APOA4P06727 396 aa17.42■□□□□ 0.38
KRT28-201ENST00000306658 ELFN1P0C7U0 828 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms