RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 GPR21Q99679 349 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 SIX2Q9NPC8 291 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 LDLRAP1Q5SW96 308 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 GRASPQ7Z6J2 395 aaPredicted RBP17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 LCN9Q8WX39 176 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 OSBPL10Q9BXB5 764 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 SGK2Q9HBY8 427 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 VPS4AQ9UN37 437 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 GALTP07902 379 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 ITPKAP23677 461 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 EDNRBP24530 442 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 SCIMPQ6UWF3 145 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 SERPINA9Q86WD7 417 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 AADATQ8N5Z0 425 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 CPT1BQ92523 772 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 CENPTQ96BT3 561 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 ELAC1Q9H777 363 aaKnown RBP17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 C3orf14Q9HBI5 128 aa17.65■□□□□ 0.42
CDC42EP3-201ENST00000295324 NPEPPSL1A6NEC2 478 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 LRRC14BA6NHZ5 514 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 PIK3R1P27986 724 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 TIE1P35590 1138 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 TMPRSS11BQ86T26 416 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 HMGB4Q8WW32 186 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 CAB39LQ9H9S4 337 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 NR2E1Q9Y466 385 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 MTMR11A4FU01 709 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 ZFP1Q6P2D0 407 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 BCO2Q9BYV7 579 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 SAC3D1A6NKF1 404 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 MT-CYBP00156 380 aaPredicted RBP17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 TAF1AQ15573 450 aaPredicted RBP17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 GPAT3Q53EU6 434 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 FAAH2Q6GMR7 532 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 ZNF549Q6P9A3 640 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 PPCDCQ96CD2 204 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 SLC38A3Q99624 504 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 REEP1Q9H902 201 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 ERVK-5Q9HDB9 667 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 H3BNH8 94 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 ESR1P03372 595 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 HNRNPLP14866 589 aaKnown RBP eCLIP17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 CDH13P55290 713 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 NAE1Q13564 534 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 PDK4Q16654 411 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 EOGTQ5NDL2 527 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 FBXL22Q6P050 247 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 CYB5D1Q6P9G0 228 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 TMEM154Q6P9G4 183 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 RNF148Q8N7C7 305 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 NIPA2Q8N8Q9 360 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 RSPH9Q9H1X1 276 aaPredicted RBP17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 SUV39H2Q9H5I1 410 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 LRRC4CQ9HCJ2 640 aa17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 COL2A1P02458 1487 aaPredicted RBP17.64■□□□□ 0.41
CDC42EP3-201ENST00000295324 IQCF3P0C7M6 154 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 NSG1P42857 185 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 PTGER3P43115 390 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 NUP107P57740 925 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 CCDC142Q17RM4 750 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 TMEM220Q6QAJ8 160 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 DTLQ9NZJ0 730 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 RPS6KA6Q9UK32 745 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 MRTO4Q9UKD2 239 aaKnown RBP17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 PIAS1O75925 651 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 PPIBP23284 216 aaKnown RBP17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 IL5RAQ01344 420 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 TRIM40Q6P9F5 258 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 NRSN1Q8IZ57 195 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 SLC44A1Q8WWI5 657 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 IGSF9Q9P2J2 1179 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 MTF2Q9Y483 593 aaPredicted RBP17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 GRIN2DO15399 1336 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 ENO4A6NNW6 628 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 RPIAP49247 311 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 OTUD3Q5T2D3 398 aaPredicted RBP17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 FAM20CQ8IXL6 584 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 TTYH3Q9C0H2 523 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 KLHL4Q9C0H6 718 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 CDH19Q9H159 772 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 SLC7A4O43246 635 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 LAPTM5Q13571 262 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 LRRC32Q14392 662 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 CHST15Q7LFX5 561 aaPredicted RBP17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 ZC3H7AQ8IWR0 971 aaKnown RBP17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 METTL21AQ8WXB1 218 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 RAD51AP1Q96B01 352 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 PRICKLE1Q96MT3 831 aaPredicted RBP17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 CCDC177Q9NQR7 707 aaPredicted RBP17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 MIOSQ9NXC5 875 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 ZNF865P0CJ78 1059 aaPredicted RBP17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 IDO1P14902 403 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 TCHHL1Q5QJ38 904 aaPredicted RBP17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 STK32CQ86UX6 486 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 PANX1Q96RD7 426 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 PCDHGA4Q9Y5G9 962 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 HEBP2Q9Y5Z4 205 aa17.63■□□□□ 0.41
CDC42EP3-201ENST00000295324 GTPBP1O00178 669 aaKnown RBP17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 ZNF623O75123 536 aa17.62■□□□□ 0.41
CDC42EP3-201ENST00000295324 IPO13O94829 963 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms