RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 CCNIQ14094 377 aa13.94□□□□□ -0.18
NXF1-201ENST00000294172 SETMARQ53H47 684 aaPredicted RBP13.94□□□□□ -0.18
NXF1-201ENST00000294172 Q6ZNB5 142 aa13.94□□□□□ -0.18
NXF1-201ENST00000294172 OTOP2Q7RTS6 562 aa13.94□□□□□ -0.18
NXF1-201ENST00000294172 CAMK1DQ8IU85 385 aa13.94□□□□□ -0.18
NXF1-201ENST00000294172 SIDT2Q8NBJ9 832 aaKnown RBP13.94□□□□□ -0.18
NXF1-201ENST00000294172 RHEBL1Q8TAI7 183 aa13.94□□□□□ -0.18
NXF1-201ENST00000294172 ZNF333Q96JL9 665 aa13.94□□□□□ -0.18
NXF1-201ENST00000294172 BIRC8Q96P09 236 aa13.94□□□□□ -0.18
NXF1-201ENST00000294172 GPR63Q9BZJ6 419 aa13.94□□□□□ -0.18
NXF1-201ENST00000294172 CRISPLD2Q9H0B8 497 aa13.94□□□□□ -0.18
NXF1-201ENST00000294172 NDE1Q9NXR1 346 aa13.94□□□□□ -0.18
NXF1-201ENST00000294172 CFAP97Q9P2B7 532 aa13.94□□□□□ -0.18
NXF1-201ENST00000294172 LSM7Q9UK45 103 aaKnown RBP13.94□□□□□ -0.18
NXF1-201ENST00000294172 IKZF3Q9UKT9 509 aa13.94□□□□□ -0.18
NXF1-201ENST00000294172 NCF1BA6NI72 391 aaPredicted RBP13.93□□□□□ -0.18
NXF1-201ENST00000294172 NCF1CA8MVU1 366 aaPredicted RBP13.93□□□□□ -0.18
NXF1-201ENST00000294172 UBDO15205 165 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 PFDN6O15212 129 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 SMAD6O43541 496 aaKnown RBP13.93□□□□□ -0.18
NXF1-201ENST00000294172 PENKP01210 267 aaPredicted RBP13.93□□□□□ -0.18
NXF1-201ENST00000294172 MTHFD2P13995 350 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 NCF1P14598 390 aaPredicted RBP13.93□□□□□ -0.18
NXF1-201ENST00000294172 CHRM3P20309 590 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 ADSLP30566 484 aaPredicted RBP13.93□□□□□ -0.18
NXF1-201ENST00000294172 TTPAP49638 278 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 MTTPP55157 894 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 SH3BP2P78314 561 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 TSNQ15631 228 aaKnown RBP13.93□□□□□ -0.18
NXF1-201ENST00000294172 C1orf53Q5VUE5 145 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 GK5Q6ZS86 529 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 BBS7Q8IWZ6 715 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 PELI3Q8N2H9 469 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 TTC30BQ8N4P2 665 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 STAG3L4Q8TBR4 150 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 NSUN5Q96P11 429 aaKnown RBP13.93□□□□□ -0.18
NXF1-201ENST00000294172 ATOH8Q96SQ7 321 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 CDRT15Q96T59 188 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 SLC30A3Q99726 388 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 NPAS2Q99743 824 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 S100A14Q9HCY8 104 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 SARS2Q9NP81 518 aaKnown RBP13.93□□□□□ -0.18
NXF1-201ENST00000294172 MID1IP1Q9NPA3 183 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 CLEC4EQ9ULY5 219 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 SH3BP1Q9Y3L3 701 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 PKP3Q9Y446 797 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 ANKRD36A6QL64 1941 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 CDC7O00311 574 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 BTN3A1O00481 513 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 MAP3K7O43318 606 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 FKBP6O75344 327 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 VPS26AO75436 327 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 FGF18O76093 207 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 OLFM2O95897 454 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 LRG1P02750 347 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 PYGLP06737 847 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 BMP1P13497 986 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 PKMP14618 531 aaKnown RBP13.93□□□□□ -0.18
NXF1-201ENST00000294172 GKP32189 559 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 LRRC26Q2I0M4 334 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 ARMC12Q5T9G4 340 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 SNX31Q8N9S9 440 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 DCAF4L2Q8NA75 395 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 TRPC4APQ8TEL6 797 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 USP13Q92995 863 aaPredicted RBP13.93□□□□□ -0.18
NXF1-201ENST00000294172 KIAA1191Q96A73 305 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 ALG14Q96F25 216 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 C2orf49Q9BVC5 232 aaPredicted RBP13.93□□□□□ -0.18
NXF1-201ENST00000294172 DERL2Q9GZP9 239 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 SMG9Q9H0W8 520 aaKnown RBP13.93□□□□□ -0.18
NXF1-201ENST00000294172 EFCAB1Q9HAE3 211 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 EVLQ9UI08 416 aaPredicted RBP13.93□□□□□ -0.18
NXF1-201ENST00000294172 VPS9D1Q9Y2B5 631 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 ZNF711Q9Y462 761 aa13.93□□□□□ -0.18
NXF1-201ENST00000294172 KIAA0100Q14667 2235 aaKnown RBP13.92□□□□□ -0.18
NXF1-201ENST00000294172 A0A1W2PRU2 124 aa13.92□□□□□ -0.18
NXF1-201ENST00000294172 LCHNA4D1U4 455 aa13.92□□□□□ -0.18
NXF1-201ENST00000294172 TRIM43BA6NCK2 446 aa13.92□□□□□ -0.18
NXF1-201ENST00000294172 NPEPPSL1A6NEC2 478 aa13.92□□□□□ -0.18
NXF1-201ENST00000294172 KERAO60938 352 aa13.92□□□□□ -0.18
NXF1-201ENST00000294172 ATP6V1C1P21283 382 aa13.92□□□□□ -0.18
NXF1-201ENST00000294172 MSX2P35548 267 aaPredicted RBP13.92□□□□□ -0.18
NXF1-201ENST00000294172 PKNOX1P55347 436 aa13.92□□□□□ -0.18
NXF1-201ENST00000294172 HERC3Q15034 1050 aa13.92□□□□□ -0.18
NXF1-201ENST00000294172 RETSATQ6NUM9 610 aa13.92□□□□□ -0.18
NXF1-201ENST00000294172 LYSMD3Q7Z3D4 306 aa13.92□□□□□ -0.18
NXF1-201ENST00000294172 FBXO39Q8N4B4 442 aa13.92□□□□□ -0.18
NXF1-201ENST00000294172 RNF148Q8N7C7 305 aa13.92□□□□□ -0.18
NXF1-201ENST00000294172 TRIM43Q96BQ3 446 aaPredicted RBP13.92□□□□□ -0.18
NXF1-201ENST00000294172 MYO19Q96H55 970 aa13.92□□□□□ -0.18
NXF1-201ENST00000294172 PAWRQ96IZ0 340 aaKnown RBP13.92□□□□□ -0.18
NXF1-201ENST00000294172 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.92□□□□□ -0.18
NXF1-201ENST00000294172 TRMT6Q9UJA5 497 aaKnown RBP13.92□□□□□ -0.18
NXF1-201ENST00000294172 IQCF5A8MTL0 148 aa13.92□□□□□ -0.18
NXF1-201ENST00000294172 E5RI56 91 aa13.92□□□□□ -0.18
NXF1-201ENST00000294172 NRG2O14511 850 aaPredicted RBP13.92□□□□□ -0.18
NXF1-201ENST00000294172 CLASP2O75122 1294 aaKnown RBP13.92□□□□□ -0.18
NXF1-201ENST00000294172 ECI2O75521 394 aa13.92□□□□□ -0.18
NXF1-201ENST00000294172 CDK14O94921 469 aa13.92□□□□□ -0.18
NXF1-201ENST00000294172 TIMP1P01033 207 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms