RNA–Protein interactions for RNA: ENST00000287538.9

ZIC3-201, Transcript of Zic family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC3, Length 3,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-201ENST00000287538 SCUBE2Q9NQ36 999 aa12.85□□□□□ -0.35
ZIC3-201ENST00000287538 TMEM248Q9NWD8 314 aa12.85□□□□□ -0.35
ZIC3-201ENST00000287538 TRNAU1APQ9NX07 287 aaKnown RBP12.85□□□□□ -0.35
ZIC3-201ENST00000287538 MARCH4Q9P2E8 410 aaPredicted RBP12.85□□□□□ -0.35
ZIC3-201ENST00000287538 XPR1Q9UBH6 696 aa12.85□□□□□ -0.35
ZIC3-201ENST00000287538 STK39Q9UEW8 545 aa12.85□□□□□ -0.35
ZIC3-201ENST00000287538 AFF4Q9UHB7 1163 aaKnown RBP12.85□□□□□ -0.35
ZIC3-201ENST00000287538 OGDHLQ9ULD0 1010 aa12.85□□□□□ -0.35
ZIC3-201ENST00000287538 FADS3Q9Y5Q0 445 aa12.85□□□□□ -0.35
ZIC3-201ENST00000287538 PSMD3O43242 534 aa12.85□□□□□ -0.35
ZIC3-201ENST00000287538 ALDH1A2O94788 518 aa12.85□□□□□ -0.35
ZIC3-201ENST00000287538 COL6A1P12109 1028 aa12.85□□□□□ -0.35
ZIC3-201ENST00000287538 ACADVLP49748 655 aa12.85□□□□□ -0.35
ZIC3-201ENST00000287538 ZNF135P52742 658 aaPredicted RBP12.85□□□□□ -0.35
ZIC3-201ENST00000287538 NSUN2Q08J23 767 aaKnown RBP eCLIP12.85□□□□□ -0.35
ZIC3-201ENST00000287538 SERINC3Q13530 473 aa12.85□□□□□ -0.35
ZIC3-201ENST00000287538 CBX2Q14781 532 aaPredicted RBP12.85□□□□□ -0.35
ZIC3-201ENST00000287538 OGFOD2Q6N063 350 aa12.85□□□□□ -0.35
ZIC3-201ENST00000287538 CNKSR3Q6P9H4 555 aa12.85□□□□□ -0.35
ZIC3-201ENST00000287538 CCDC117Q8IWD4 279 aaPredicted RBP12.85□□□□□ -0.35
ZIC3-201ENST00000287538 CPNE9Q8IYJ1 553 aa12.85□□□□□ -0.35
ZIC3-201ENST00000287538 BHLHE22Q8NFJ8 381 aaPredicted RBP12.85□□□□□ -0.35
ZIC3-201ENST00000287538 SREK1Q8WXA9 508 aaKnown RBP12.85□□□□□ -0.35
ZIC3-201ENST00000287538 EME1Q96AY2 570 aa12.85□□□□□ -0.35
ZIC3-201ENST00000287538 THAP11Q96EK4 314 aa12.85□□□□□ -0.35
ZIC3-201ENST00000287538 CDRT15Q96T59 188 aa12.85□□□□□ -0.35
ZIC3-201ENST00000287538 ACE2Q9BYF1 805 aaPredicted RBP12.85□□□□□ -0.35
ZIC3-201ENST00000287538 TNKS2Q9H2K2 1166 aa12.85□□□□□ -0.35
ZIC3-201ENST00000287538 WDR55Q9H6Y2 383 aaPredicted RBP12.85□□□□□ -0.35
ZIC3-201ENST00000287538 EPS15L1Q9UBC2 864 aa12.85□□□□□ -0.35
ZIC3-201ENST00000287538 COPG2Q9UBF2 871 aa12.85□□□□□ -0.35
ZIC3-201ENST00000287538 RNF11Q9Y3C5 154 aa12.85□□□□□ -0.35
ZIC3-201ENST00000287538 PCDHB9Q9Y5E1 797 aa12.85□□□□□ -0.35
ZIC3-201ENST00000287538 PER2O15055 1255 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 INPPL1O15357 1258 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 RFPL2O75678 378 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 SOD2P04179 222 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 BMP1P13497 986 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 PAX3P23760 479 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 PPARGP37231 505 aaPredicted RBP12.84□□□□□ -0.35
ZIC3-201ENST00000287538 BCAP31P51572 246 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 PRMT2P55345 433 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 POM121L1PQ3SYA9 428 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 ZNF362Q5T0B9 420 aaPredicted RBP12.84□□□□□ -0.35
ZIC3-201ENST00000287538 ZC3HC1Q86WB0 502 aaKnown RBP12.84□□□□□ -0.35
ZIC3-201ENST00000287538 TICAM1Q8IUC6 712 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 UMODL1-AS1Q8N2C9 162 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 DDHD1Q8NEL9 900 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 USP13Q92995 863 aaPredicted RBP12.84□□□□□ -0.35
ZIC3-201ENST00000287538 TOP1MTQ969P6 601 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 SERPINI1Q99574 410 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 ZNF334Q9HCZ1 680 aaPredicted RBP12.84□□□□□ -0.35
ZIC3-201ENST00000287538 HCFC1R1Q9NWW0 138 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 ITGB1BP2Q9UKP3 347 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 PCDHB12Q9Y5F1 795 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 MYOFQ9NZM1 2061 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 SDK1Q7Z5N4 2213 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 TYW5A2RUC4 315 aaKnown RBP12.84□□□□□ -0.35
ZIC3-201ENST00000287538 SERPINB5P36952 375 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 ALDH3B2P48448 385 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 CLCN2P51788 898 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 THOP1P52888 689 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 ZRANB3Q5FWF4 1079 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 SMYD5Q6GMV2 418 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 MSANTD2Q6P1R3 559 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 C16orf87Q6PH81 154 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 NANOGNBQ7Z5D8 188 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 NAT16Q8N8M0 369 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 TRIM43Q96BQ3 446 aaPredicted RBP12.84□□□□□ -0.35
ZIC3-201ENST00000287538 C1orf74Q96LT6 269 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 RANBP9Q96S59 729 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 UTP6Q9NYH9 597 aaKnown RBP12.84□□□□□ -0.35
ZIC3-201ENST00000287538 CFAP97Q9P2B7 532 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 VWA8A3KMH1 1905 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 CROCCQ5TZA2 2017 aa12.84□□□□□ -0.35
ZIC3-201ENST00000287538 HEATR9A2RTY3 570 aa12.83□□□□□ -0.35
ZIC3-201ENST00000287538 TMX2-CTNND1H3BSU7 103 aa12.83□□□□□ -0.35
ZIC3-201ENST00000287538 K7EPI3 171 aa12.83□□□□□ -0.35
ZIC3-201ENST00000287538 H6PDO95479 791 aa12.83□□□□□ -0.35
ZIC3-201ENST00000287538 ZBTB11O95625 1053 aaPredicted RBP12.83□□□□□ -0.35
ZIC3-201ENST00000287538 FUCA1P04066 466 aa12.83□□□□□ -0.35
ZIC3-201ENST00000287538 CNPP09543 421 aaKnown RBP12.83□□□□□ -0.35
ZIC3-201ENST00000287538 CNTFP26441 200 aa12.83□□□□□ -0.35
ZIC3-201ENST00000287538 EPHA3P29320 983 aa12.83□□□□□ -0.35
ZIC3-201ENST00000287538 HMOX2P30519 316 aa12.83□□□□□ -0.35
ZIC3-201ENST00000287538 FMO4P31512 558 aa12.83□□□□□ -0.35
ZIC3-201ENST00000287538 EIF2B2P49770 351 aaKnown RBP12.83□□□□□ -0.35
ZIC3-201ENST00000287538 C21orf59P57076 290 aa12.83□□□□□ -0.35
ZIC3-201ENST00000287538 RHOAP61586 193 aa12.83□□□□□ -0.35
ZIC3-201ENST00000287538 SPIDRQ14159 915 aa12.83□□□□□ -0.35
ZIC3-201ENST00000287538 PCLAFQ15004 111 aa12.83□□□□□ -0.35
ZIC3-201ENST00000287538 MBLAC2Q68D91 279 aa12.83□□□□□ -0.35
ZIC3-201ENST00000287538 RANBP10Q6VN20 620 aa12.83□□□□□ -0.35
ZIC3-201ENST00000287538 DCDC5Q6ZRR9 648 aa12.83□□□□□ -0.35
ZIC3-201ENST00000287538 FSTL5Q8N475 847 aaPredicted RBP12.83□□□□□ -0.35
ZIC3-201ENST00000287538 ZNF781Q8N8C0 355 aa12.83□□□□□ -0.35
ZIC3-201ENST00000287538 SNX31Q8N9S9 440 aa12.83□□□□□ -0.35
ZIC3-201ENST00000287538 OR4K2Q8NGD2 314 aa12.83□□□□□ -0.35
ZIC3-201ENST00000287538 GPATCH1Q9BRR8 931 aaKnown RBP12.83□□□□□ -0.35
ZIC3-201ENST00000287538 TMEM175Q9BSA9 504 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms