RNA–Protein interactions for RNA: ENST00000285124.12

PPP4R1-201, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-201ENST00000285124 CNTN1Q12860 1018 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 PTRHD1Q6GMV3 140 aaKnown RBP9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 ZNF549Q6P9A3 640 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 METTL3Q86U44 580 aaKnown RBP9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 HDDC3Q8N4P3 179 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 BEND7Q8N7W2 519 aaPredicted RBP9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 LRRC8CQ8TDW0 803 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 PPP1R36Q96LQ0 422 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 TSNARE1Q96NA8 513 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 GUCD1Q96NT3 240 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 RIOK2Q9BVS4 552 aaKnown RBP9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 OBP2AQ9NY56 170 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 CIDEBQ9UHD4 219 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 ACOT9Q9Y305 439 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 FIS1Q9Y3D6 152 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 GMNCA6NCL1 334 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 CAPN8A6NHC0 703 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 OR2AG2A6NM03 316 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 TSPAN8P19075 237 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 PBLDP30039 288 aaPredicted RBP9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 LIG3P49916 1009 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 SERPINB8P50452 374 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 PDAP1Q13442 181 aaKnown RBP9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 CHI3L2Q15782 390 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 TAF1BQ53T94 588 aaPredicted RBP9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 RNF43Q68DV7 783 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 AFTPHQ6ULP2 937 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 KIAA1324Q6UXG2 1013 aaKnown RBP9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 KIAA0907Q7Z7F0 614 aaPredicted RBP9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 TBC1D1Q86TI0 1168 aaPredicted RBP9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 TMPRSS6Q8IU80 811 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.76□□□□□ -0.852e-7■■□□□ 14.2
PPP4R1-201ENST00000285124 SIDT2Q8NBJ9 832 aaKnown RBP9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 RPLP0P6Q8NHW5 317 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 ESAMQ96AP7 390 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 CCT8L2Q96SF2 557 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 GPR21Q99679 349 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 SLC30A3Q99726 388 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 CEP44Q9C0F1 390 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 SENP1Q9P0U3 644 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 MBD1Q9UIS9 605 aaPredicted RBP9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 DCTN4Q9UJW0 460 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 SMG5Q9UPR3 1016 aaKnown RBP9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 PLLPQ9Y342 182 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 PRKAB1Q9Y478 270 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 LAMA1P25391 3075 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 EDDM13A0A1B0GTR0 161 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 UPK3BL1B0FP48 263 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 UPK3BL2E5RIL1 263 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 ARNTLO00327 626 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 PAK4O96013 591 aaPredicted RBP9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 PRNPP04156 253 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 SRPRAP08240 638 aaKnown RBP9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 CCR10P46092 362 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 SERPINB4P48594 390 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 RAB10P61026 200 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 ELAVL3Q14576 367 aaKnown RBP9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 SDE2Q6IQ49 451 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 DOK6Q6PKX4 331 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 PAQR3Q6TCH7 311 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 Q6ZS52 159 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 CYS1Q717R9 158 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 CCNYL1Q8N7R7 359 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 OR14C36Q8NHC7 312 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 MTBPQ96DY7 904 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 ZNF641Q96N77 438 aaPredicted RBP9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 RANBP9Q96S59 729 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 PHF7Q9BWX1 381 aaPredicted RBP9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 ALG9Q9H6U8 611 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 ABCF3Q9NUQ8 709 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 HACD3Q9P035 362 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 PRSS21Q9Y6M0 314 aa9.76□□□□□ -0.85
PPP4R1-201ENST00000285124 ANKRD12Q6UB98 2062 aa9.75□□□□□ -0.85
PPP4R1-201ENST00000285124 LYPLA1O75608 230 aaPredicted RBP9.75□□□□□ -0.85
PPP4R1-201ENST00000285124 PAPSS2O95340 614 aaPredicted RBP9.75□□□□□ -0.85
PPP4R1-201ENST00000285124 ASMTLO95671 621 aa9.75□□□□□ -0.85
PPP4R1-201ENST00000285124 C1SP09871 688 aa9.75□□□□□ -0.85
PPP4R1-201ENST00000285124 SLC35E2BP0CK96 405 aa9.75□□□□□ -0.85
PPP4R1-201ENST00000285124 HOXB2P14652 356 aa9.75□□□□□ -0.85
PPP4R1-201ENST00000285124 ITGALP20701 1170 aa9.75□□□□□ -0.85
PPP4R1-201ENST00000285124 STC1P52823 247 aa9.75□□□□□ -0.85
PPP4R1-201ENST00000285124 XIAPP98170 497 aa9.75□□□□□ -0.85
PPP4R1-201ENST00000285124 SATB1Q01826 763 aa9.75□□□□□ -0.85
PPP4R1-201ENST00000285124 GRSF1Q12849 480 aaKnown RBP eCLIP9.75□□□□□ -0.85
PPP4R1-201ENST00000285124 DLG1Q12959 904 aa9.75□□□□□ -0.85
PPP4R1-201ENST00000285124 ITGA9Q13797 1035 aa9.75□□□□□ -0.85
PPP4R1-201ENST00000285124 UBXN2BQ14CS0 331 aa9.75□□□□□ -0.85
PPP4R1-201ENST00000285124 ERAP2Q6P179 960 aa9.75□□□□□ -0.85
PPP4R1-201ENST00000285124 TMEM207Q6UWW9 146 aa9.75□□□□□ -0.85
PPP4R1-201ENST00000285124 SH2D5Q6ZV89 423 aa9.75□□□□□ -0.85
PPP4R1-201ENST00000285124 C10orf107Q8IVU9 208 aa9.75□□□□□ -0.85
PPP4R1-201ENST00000285124 PHTF2Q8N3S3 785 aa9.75□□□□□ -0.85
PPP4R1-201ENST00000285124 HEXDCQ8WVB3 486 aa9.75□□□□□ -0.85
PPP4R1-201ENST00000285124 GPR22Q99680 433 aa9.75□□□□□ -0.85
PPP4R1-201ENST00000285124 CPEB1Q9BZB8 566 aaKnown RBP9.75□□□□□ -0.85
PPP4R1-201ENST00000285124 TMEM245Q9H330 911 aa9.75□□□□□ -0.85
PPP4R1-201ENST00000285124 FAM83DQ9H4H8 585 aa9.75□□□□□ -0.85
PPP4R1-201ENST00000285124 PPCSQ9HAB8 311 aa9.75□□□□□ -0.85
PPP4R1-201ENST00000285124 MRM3Q9HC36 420 aaKnown RBP9.75□□□□□ -0.85
PPP4R1-201ENST00000285124 THAP10Q9P2Z0 257 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms