RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 PRAMEF1O95521 474 aa16.29■□□□□ 0.2
TPM1-201ENST00000267996 SERPINE1P05121 402 aa16.29■□□□□ 0.2
TPM1-201ENST00000267996 LTA4HP09960 611 aaKnown RBP16.29■□□□□ 0.2
TPM1-201ENST00000267996 CHRM1P11229 460 aaPredicted RBP16.29■□□□□ 0.2
TPM1-201ENST00000267996 GRK2P25098 689 aa16.29■□□□□ 0.2
TPM1-201ENST00000267996 SPAM1P38567 509 aa16.29■□□□□ 0.2
TPM1-201ENST00000267996 KPNA2P52292 529 aaKnown RBP16.29■□□□□ 0.2
TPM1-201ENST00000267996 HNRNPH2P55795 449 aaKnown RBP16.29■□□□□ 0.2
TPM1-201ENST00000267996 STX3Q13277 289 aa16.29■□□□□ 0.2
TPM1-201ENST00000267996 GRIN2CQ14957 1233 aa16.29■□□□□ 0.2
TPM1-201ENST00000267996 FAM83EQ2M2I3 478 aa16.29■□□□□ 0.2
TPM1-201ENST00000267996 ITPRIPL2Q3MIP1 535 aa16.29■□□□□ 0.2
TPM1-201ENST00000267996 GPR33Q49SQ1 333 aa16.29■□□□□ 0.2
TPM1-201ENST00000267996 FNDC3BQ53EP0 1204 aaKnown RBP16.29■□□□□ 0.2
TPM1-201ENST00000267996 SETMARQ53H47 684 aaPredicted RBP16.29■□□□□ 0.2
TPM1-201ENST00000267996 C9orf64Q5T6V5 341 aa16.29■□□□□ 0.2
TPM1-201ENST00000267996 AGAP9Q5VTM2 703 aa16.29■□□□□ 0.2
TPM1-201ENST00000267996 MTSS1LQ765P7 747 aa16.29■□□□□ 0.2
TPM1-201ENST00000267996 SNX20Q7Z614 316 aa16.29■□□□□ 0.2
TPM1-201ENST00000267996 STK40Q8N2I9 435 aa16.29■□□□□ 0.2
TPM1-201ENST00000267996 ANKS4BQ8N8V4 417 aa16.29■□□□□ 0.2
TPM1-201ENST00000267996 ANKRD49Q8WVL7 239 aa16.29■□□□□ 0.2
TPM1-201ENST00000267996 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.29■□□□□ 0.2
TPM1-201ENST00000267996 MRPL57Q9BQC6 102 aaKnown RBP16.29■□□□□ 0.2
TPM1-201ENST00000267996 ARL2BPQ9Y2Y0 163 aa16.29■□□□□ 0.2
TPM1-201ENST00000267996 COMMD10Q9Y6G5 202 aa16.29■□□□□ 0.2
TPM1-201ENST00000267996 C5orf42Q9H799 3197 aa16.29■□□□□ 0.2
TPM1-201ENST00000267996 UBA6A0AVT1 1052 aaPredicted RBP16.28■□□□□ 0.2
TPM1-201ENST00000267996 TBC1D3BA6NDS4 549 aa16.28■□□□□ 0.2
TPM1-201ENST00000267996 C1SP09871 688 aa16.28■□□□□ 0.2
TPM1-201ENST00000267996 CYP2A6P11509 494 aaPredicted RBP16.28■□□□□ 0.2
TPM1-201ENST00000267996 PKMP14618 531 aaKnown RBP16.28■□□□□ 0.2
TPM1-201ENST00000267996 ZNF30P17039 623 aa16.28■□□□□ 0.2
TPM1-201ENST00000267996 FMO4P31512 558 aa16.28■□□□□ 0.2
TPM1-201ENST00000267996 VIPR1P32241 457 aa16.28■□□□□ 0.2
TPM1-201ENST00000267996 NFATC2Q13469 925 aa16.28■□□□□ 0.2
TPM1-201ENST00000267996 ZNF234Q14588 700 aa16.28■□□□□ 0.2
TPM1-201ENST00000267996 ZDHHC20Q5W0Z9 365 aa16.28■□□□□ 0.2
TPM1-201ENST00000267996 FAM151BQ6UXP7 276 aa16.28■□□□□ 0.2
TPM1-201ENST00000267996 PIM3Q86V86 326 aa16.28■□□□□ 0.2
TPM1-201ENST00000267996 ZNF366Q8N895 744 aa16.28■□□□□ 0.2
TPM1-201ENST00000267996 GPR26Q8NDV2 337 aa16.28■□□□□ 0.2
TPM1-201ENST00000267996 P2RY12Q9H244 342 aa16.28■□□□□ 0.2
TPM1-201ENST00000267996 MRPL46Q9H2W6 279 aaKnown RBP16.28■□□□□ 0.2
TPM1-201ENST00000267996 THAP1Q9NVV9 213 aa16.28■□□□□ 0.2
TPM1-201ENST00000267996 OXSMQ9NWU1 459 aa16.28■□□□□ 0.2
TPM1-201ENST00000267996 KLHL14Q9P2G3 628 aa16.28■□□□□ 0.2
TPM1-201ENST00000267996 HCN2Q9UL51 889 aa16.28■□□□□ 0.2
TPM1-201ENST00000267996 FNDC3AQ9Y2H6 1198 aaKnown RBP16.28■□□□□ 0.2
TPM1-201ENST00000267996 GLYATL1P3A0A0U1RQE8 302 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 A8MX80 341 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 ANHXE9PGG2 379 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 TK2O00142 265 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 OR1I1O60431 355 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 ESR1P03372 595 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 CCDC166P0CW27 439 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 MYL2P10916 166 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 RALBP11234 206 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 ITGALP20701 1170 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 NFKBIAP25963 317 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 GRIA2P42262 883 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 GLRBP48167 497 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 SPINT3P49223 89 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 PRKAA2P54646 552 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 SEMG2Q02383 582 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 HTR4Q13639 388 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 CSHL1Q14406 222 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 CHRNA6Q15825 494 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 PREPLQ4J6C6 727 aaPredicted RBP16.27■□□□□ 0.2
TPM1-201ENST00000267996 TECRLQ5HYJ1 363 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 CTSL3PQ5NE16 218 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 LYPLAL1Q5VWZ2 237 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 ZCCHC23Q6ZST2 131 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 TAS2R42Q7RTR8 314 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 SERPINA9Q86WD7 417 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 TMIEQ8NEW7 156 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 ZNF398Q8TD17 642 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 UCMAQ8WVF2 138 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 PBXIP1Q96AQ6 731 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 SCYL1Q96KG9 808 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 PLEKHG4BQ96PX9 1271 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 PLCD4Q9BRC7 762 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 C20orf27Q9GZN8 174 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 CCDC68Q9H2F9 335 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 ASB8Q9H765 288 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 PCDH12Q9NPG4 1184 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 TAS2R13Q9NYV9 303 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 CPSF2Q9P2I0 782 aaKnown RBP16.27■□□□□ 0.2
TPM1-201ENST00000267996 THAP10Q9P2Z0 257 aaPredicted RBP16.27■□□□□ 0.2
TPM1-201ENST00000267996 XPR1Q9UBH6 696 aa16.27■□□□□ 0.2
TPM1-201ENST00000267996 MTF2Q9Y483 593 aaPredicted RBP16.27■□□□□ 0.2
TPM1-201ENST00000267996 OAS3Q9Y6K5 1087 aaKnown RBP16.27■□□□□ 0.2
TPM1-201ENST00000267996 TCF20Q9UGU0 1960 aaKnown RBP16.27■□□□□ 0.2
TPM1-201ENST00000267996 ATXN2Q99700 1313 aaKnown RBP16.27■□□□□ 0.19
TPM1-201ENST00000267996 C16orf96A6NNT2 1141 aa16.27■□□□□ 0.19
TPM1-201ENST00000267996 GPR39O43194 453 aa16.27■□□□□ 0.19
TPM1-201ENST00000267996 TRIM13O60858 407 aa16.27■□□□□ 0.19
TPM1-201ENST00000267996 RHOBTB1O94844 696 aa16.27■□□□□ 0.19
TPM1-201ENST00000267996 KAT7O95251 611 aa16.27■□□□□ 0.19
TPM1-201ENST00000267996 PRNPP04156 253 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms