RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 E9PAM4 449 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 G3V2T6 193 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 TRIM38O00635 465 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 PER2O15055 1255 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 ATXN1P54253 815 aaKnown RBP13.2□□□□□ -0.3
COL1A1-201ENST00000225964 WNT3AP56704 352 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.2□□□□□ -0.3
COL1A1-201ENST00000225964 PIK3R6Q5UE93 754 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 TCAIMQ8N3R3 496 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 SLAIN1Q8ND83 568 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 RDH11Q8TC12 318 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 RELTQ969Z4 430 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 COPS7AQ9UBW8 275 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 RGSL1A5PLK6 1076 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 IQCF5A8MTL0 148 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 SEPT4O43236 478 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 CTSOP43234 321 aaPredicted RBP13.2□□□□□ -0.3
COL1A1-201ENST00000225964 NRG1Q02297 640 aaPredicted RBP13.2□□□□□ -0.3
COL1A1-201ENST00000225964 C2orf80Q0P641 193 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 NET1Q7Z628 596 aaPredicted RBP13.2□□□□□ -0.3
COL1A1-201ENST00000225964 ANKRD23Q86SG2 305 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 FAM81AQ8TBF8 368 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 SPPL2BQ8TCT7 592 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 EXOSC8Q96B26 276 aaKnown RBP13.2□□□□□ -0.3
COL1A1-201ENST00000225964 TMEM27Q9HBJ8 222 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 DEPDC5O75140 1603 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 FPGTO14772 594 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 IDO1P14902 403 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 ADSSP30520 456 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 SLC25A52Q3SY17 297 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 PARP15Q460N3 678 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 KCTD21Q4G0X4 260 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 TMC8Q8IU68 726 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 SMPDL3BQ92485 455 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 MKL1Q969V6 931 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 UBAP1Q9NZ09 502 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 HCN3Q9P1Z3 774 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 FBXW2Q9UKT8 454 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 MRPS17Q9Y2R5 130 aaKnown RBP13.2□□□□□ -0.3
COL1A1-201ENST00000225964 hCG_1818297A0A087WSY0 165 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 LRRC72A6NJI9 287 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 CLDN4O14493 209 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 MEIS2O14770 477 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 ATP13A5Q4VNC0 1218 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 CERCAMQ5T4B2 595 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 ABRAXAS1Q6UWZ7 409 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.2□□□□□ -0.3
COL1A1-201ENST00000225964 RAP2CQ9Y3L5 183 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 MFHAS1Q9Y4C4 1052 aa13.2□□□□□ -0.3
COL1A1-201ENST00000225964 ATP6AP2A0A1C7CYW4 349 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 TPD52L2O43399 206 aaKnown RBP13.19□□□□□ -0.3
COL1A1-201ENST00000225964 ATP6AP2O75787 350 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 SCGNO76038 276 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 PRNPP04156 253 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 ARF4P18085 180 aaPredicted RBP13.19□□□□□ -0.3
COL1A1-201ENST00000225964 PPP2R2BQ00005 443 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 QPRTQ15274 297 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 OTOP3Q7RTS5 596 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 STX12Q86Y82 276 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 PHF13Q86YI8 300 aaPredicted RBP13.19□□□□□ -0.3
COL1A1-201ENST00000225964 SHC3Q92529 594 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 C3orf18Q9UK00 162 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 FAM86C2PA6NEL3 165 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 PDHA2P29803 388 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 PRKG2Q13237 762 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 GRIK5Q16478 980 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 TCEAL6Q6IPX3 200 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 VITQ6UXI7 678 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 KBTBD2Q8IY47 623 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 POLMQ9NP87 494 aaPredicted RBP13.19□□□□□ -0.3
COL1A1-201ENST00000225964 EGFL7Q9UHF1 273 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 GGA2Q9UJY4 613 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 PLOD3O60568 738 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 SLC26A3P40879 764 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 LARS2Q15031 903 aaKnown RBP13.19□□□□□ -0.3
COL1A1-201ENST00000225964 SLC30A6Q6NXT4 461 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 PGBD2Q6P3X8 592 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 GALNTL5Q7Z4T8 443 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 DHRS7Q9Y394 339 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 FER1L4A9Z1Z3 1794 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 CLUHO75153 1309 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 PSMD9O00233 223 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 BTN3A3O00478 584 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 SLC22A3O75751 556 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 SLC5A3P53794 718 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 PUS10Q3MIT2 529 aaKnown RBP13.19□□□□□ -0.3
COL1A1-201ENST00000225964 DUPD1Q68J44 220 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 FAM71AQ8IYT1 594 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 LRRC52Q8N7C0 313 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 OR2L5Q8NG80 312 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 OR4K2Q8NGD2 314 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 FNIP1Q8TF40 1166 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 EBNA1BP2Q99848 306 aaKnown RBP13.19□□□□□ -0.3
COL1A1-201ENST00000225964 PTPN18Q99952 460 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 TLR10Q9BXR5 811 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 L1RE1Q9UN81 338 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 ERVW-1Q9UQF0 538 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 ERVK-11Q9UQG0 969 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 MAP4K5Q9Y4K4 846 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 IQGAP1P46940 1657 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms