RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 FAM156AQ8NDB6 213 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 OR7D4Q8NG98 312 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 ZFRQ96KR1 1074 aaKnown RBP21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 TRIM15Q9C019 465 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 TRIM4Q9C037 500 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 SCUBE2Q9NQ36 999 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 PFDN4Q9NQP4 134 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 SPO11Q9Y5K1 396 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 A0A0J9YYE9 177 aa21.89■■□□□ 1.09
SMARCD2-201ENST00000225742 PIP5K1BO14986 540 aa21.89■■□□□ 1.09
SMARCD2-201ENST00000225742 KLK8O60259 260 aa21.89■■□□□ 1.09
SMARCD2-201ENST00000225742 CLASP2O75122 1294 aaKnown RBP21.89■■□□□ 1.09
SMARCD2-201ENST00000225742 CREB5Q02930 508 aa21.89■■□□□ 1.09
SMARCD2-201ENST00000225742 CLCQ05315 142 aa21.89■■□□□ 1.09
SMARCD2-201ENST00000225742 NAIF1Q69YI7 327 aaPredicted RBP21.89■■□□□ 1.09
SMARCD2-201ENST00000225742 GLT6D1Q7Z4J2 308 aa21.89■■□□□ 1.09
SMARCD2-201ENST00000225742 DHFR2Q86XF0 187 aa21.89■■□□□ 1.09
SMARCD2-201ENST00000225742 MINDY1Q8N5J2 469 aa21.89■■□□□ 1.09
SMARCD2-201ENST00000225742 GIPC2Q8TF65 315 aa21.89■■□□□ 1.09
SMARCD2-201ENST00000225742 ATP6V1E2Q96A05 226 aa21.89■■□□□ 1.09
SMARCD2-201ENST00000225742 B3GALT6Q96L58 329 aa21.89■■□□□ 1.09
SMARCD2-201ENST00000225742 TTPALQ9BTX7 342 aa21.89■■□□□ 1.09
SMARCD2-201ENST00000225742 MRPL9Q9BYD2 267 aaKnown RBP21.89■■□□□ 1.09
SMARCD2-201ENST00000225742 MRPS26Q9BYN8 205 aaKnown RBP21.89■■□□□ 1.09
SMARCD2-201ENST00000225742 PCDHAC1Q9H158 963 aa21.89■■□□□ 1.09
SMARCD2-201ENST00000225742 GID8Q9NWU2 228 aa21.89■■□□□ 1.09
SMARCD2-201ENST00000225742 PADI4Q9UM07 663 aa21.89■■□□□ 1.09
SMARCD2-201ENST00000225742 COMMD10Q9Y6G5 202 aa21.89■■□□□ 1.09
SMARCD2-201ENST00000225742 SUPT3HB4E1H0 165 aa21.88■■□□□ 1.09
SMARCD2-201ENST00000225742 SUPT3HO75486 399 aa21.88■■□□□ 1.09
SMARCD2-201ENST00000225742 RPS17P08708 135 aaKnown RBP21.88■■□□□ 1.09
SMARCD2-201ENST00000225742 IDO1P14902 403 aa21.88■■□□□ 1.09
SMARCD2-201ENST00000225742 ARSAP15289 507 aa21.88■■□□□ 1.09
SMARCD2-201ENST00000225742 LPOP22079 712 aaPredicted RBP21.88■■□□□ 1.09
SMARCD2-201ENST00000225742 FMO4P31512 558 aa21.88■■□□□ 1.09
SMARCD2-201ENST00000225742 POLE2P56282 527 aa21.88■■□□□ 1.09
SMARCD2-201ENST00000225742 OGFOD2Q6N063 350 aa21.88■■□□□ 1.09
SMARCD2-201ENST00000225742 PAQR3Q6TCH7 311 aa21.88■■□□□ 1.09
SMARCD2-201ENST00000225742 OR4K2Q8NGD2 314 aa21.88■■□□□ 1.09
SMARCD2-201ENST00000225742 RMDN1Q96DB5 314 aa21.88■■□□□ 1.09
SMARCD2-201ENST00000225742 SPON2Q9BUD6 331 aa21.88■■□□□ 1.09
SMARCD2-201ENST00000225742 TDRD1Q9BXT4 1180 aaKnown RBP21.88■■□□□ 1.09
SMARCD2-201ENST00000225742 FBRSL1Q9HCM7 1045 aaKnown RBP21.88■■□□□ 1.09
SMARCD2-201ENST00000225742 SDR39U1Q9NRG7 319 aaPredicted RBP21.88■■□□□ 1.09
SMARCD2-201ENST00000225742 RNF186Q9NXI6 227 aa21.88■■□□□ 1.09
SMARCD2-201ENST00000225742 UBAP1Q9NZ09 502 aa21.88■■□□□ 1.09
SMARCD2-201ENST00000225742 ABCD2Q9UBJ2 740 aa21.88■■□□□ 1.09
SMARCD2-201ENST00000225742 COMMD3-BMI1R4GMX3 469 aa21.88■■□□□ 1.09
SMARCD2-201ENST00000225742 ATP6AP2A0A1C7CYW4 349 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 UBA6A0AVT1 1052 aaPredicted RBP21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 VPS26AO75436 327 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 ATP6AP2O75787 350 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 SIX3O95343 332 aaPredicted RBP21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 PIRTP0C851 137 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 SMIM18P0DKX4 95 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 ZNF26P17031 533 aaPredicted RBP21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 HDCP19113 662 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 EEF1DP29692 281 aaKnown RBP21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 RPL5P46777 297 aaKnown RBP21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 TUFMP49411 452 aaKnown RBP21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 GEN1Q17RS7 908 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 USP41Q3LFD5 358 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 RTP2Q5QGT7 225 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 C6orf10Q5SRN2 563 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 OR9I1Q8NGQ6 314 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 TRPC4APQ8TEL6 797 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 EME1Q96AY2 570 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 SLC2A11Q9BYW1 496 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 CWH43Q9H720 699 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 TMEM45AQ9NWC5 275 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 AGO1Q9UL18 857 aaKnown RBP21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 LRFN2Q9ULH4 789 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 ECI2O75521 394 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 RHOCP08134 193 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 FAM58BPP0C7Q3 252 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 ATF6P18850 670 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 GSTT1P30711 240 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 GRIA2P42262 883 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 TTPAP49638 278 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 SLC7A2P52569 658 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 ATXN3P54252 364 aaPredicted RBP21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 BNIP2Q12982 314 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 ZNF177Q13360 481 aaPredicted RBP21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 ADRM1Q16186 407 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 SETMARQ53H47 684 aaPredicted RBP21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 HECTD3Q5T447 861 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 THEMIS2Q5TEJ8 643 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 DDIASQ8IXT1 998 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 ZNF597Q96LX8 424 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 ADGRE3Q9BY15 652 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 NACA2Q9H009 215 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 ARMC1Q9NVT9 282 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 MED16Q9Y2X0 877 aa21.87■■□□□ 1.09
SMARCD2-201ENST00000225742 AQP12BA6NM10 295 aa21.86■■□□□ 1.09
SMARCD2-201ENST00000225742 ANGPT2O15123 496 aa21.86■■□□□ 1.09
SMARCD2-201ENST00000225742 MLYCDO95822 493 aa21.86■■□□□ 1.09
SMARCD2-201ENST00000225742 PRLP01236 227 aa21.86■■□□□ 1.09
SMARCD2-201ENST00000225742 HSD17B1P14061 328 aa21.86■■□□□ 1.09
SMARCD2-201ENST00000225742 SCNN1BP51168 640 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms