RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 COL5A1P20908 1838 aaPredicted RBP12.62□□□□□ -0.39
LSM5-201ENST00000223084 SCN8AQ9UQD0 1980 aa12.61□□□□□ -0.39
LSM5-201ENST00000223084 PRSS38A1L453 326 aa12.61□□□□□ -0.39
LSM5-201ENST00000223084 RGSL1A5PLK6 1076 aa12.61□□□□□ -0.39
LSM5-201ENST00000223084 NEMP2A6NFY4 417 aa12.61□□□□□ -0.39
LSM5-201ENST00000223084 PDE2AO00408 941 aaPredicted RBP12.61□□□□□ -0.39
LSM5-201ENST00000223084 TNFRSF10CO14798 259 aa12.61□□□□□ -0.39
LSM5-201ENST00000223084 HYAL3O43820 417 aaPredicted RBP12.61□□□□□ -0.39
LSM5-201ENST00000223084 ZNF189O75820 626 aaPredicted RBP12.61□□□□□ -0.39
LSM5-201ENST00000223084 IFNB1P01574 187 aa12.61□□□□□ -0.39
LSM5-201ENST00000223084 FGF1P05230 155 aa12.61□□□□□ -0.39
LSM5-201ENST00000223084 ZSCAN5DPP0CG00 497 aa12.61□□□□□ -0.39
LSM5-201ENST00000223084 KELP23276 732 aa12.61□□□□□ -0.39
LSM5-201ENST00000223084 BLKP51451 505 aa12.61□□□□□ -0.39
LSM5-201ENST00000223084 PTPRCAPQ14761 206 aa12.61□□□□□ -0.39
LSM5-201ENST00000223084 CCNG2Q16589 344 aa12.61□□□□□ -0.39
LSM5-201ENST00000223084 HS1BP3Q53T59 392 aa12.61□□□□□ -0.39
LSM5-201ENST00000223084 RANBP10Q6VN20 620 aa12.61□□□□□ -0.39
LSM5-201ENST00000223084 GLT6D1Q7Z4J2 308 aa12.61□□□□□ -0.39
LSM5-201ENST00000223084 CHCHD4Q8N4Q1 142 aa12.61□□□□□ -0.39
LSM5-201ENST00000223084 CCL4L1Q8NHW4 92 aa12.61□□□□□ -0.39
LSM5-201ENST00000223084 RTP4Q96DX8 246 aa12.61□□□□□ -0.39
LSM5-201ENST00000223084 HIC2Q96JB3 615 aa12.61□□□□□ -0.39
LSM5-201ENST00000223084 APOLD1Q96LR9 279 aa12.61□□□□□ -0.39
LSM5-201ENST00000223084 TBL1YQ9BQ87 522 aa12.61□□□□□ -0.39
LSM5-201ENST00000223084 SPATA16Q9BXB7 569 aa12.61□□□□□ -0.39
LSM5-201ENST00000223084 FRMD8P1Q9BZ68 369 aaPredicted RBP12.61□□□□□ -0.39
LSM5-201ENST00000223084 TMEM168Q9H0V1 697 aa12.61□□□□□ -0.39
LSM5-201ENST00000223084 CARS2Q9HA77 564 aaKnown RBP12.61□□□□□ -0.39
LSM5-201ENST00000223084 ARFGAP3Q9NP61 516 aa12.61□□□□□ -0.39
LSM5-201ENST00000223084 SMARCAL1Q9NZC9 954 aa12.61□□□□□ -0.39
LSM5-201ENST00000223084 APOBEC2Q9Y235 224 aaKnown RBP12.61□□□□□ -0.39
LSM5-201ENST00000223084 OAS3Q9Y6K5 1087 aaKnown RBP12.61□□□□□ -0.39
LSM5-201ENST00000223084 CSNK1G3Q9Y6M4 447 aa12.61□□□□□ -0.39
LSM5-201ENST00000223084 DGKBQ9Y6T7 804 aa12.61□□□□□ -0.39
LSM5-201ENST00000223084 LY6G6EA0A0G2JKS1 128 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 LMO7DNF2Z398 122 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 YY2O15391 372 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 KIF5CO60282 957 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 ANXA6P08133 673 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 ALPPL2P10696 532 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 CKMT2P17540 419 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 STIP1P31948 543 aaKnown RBP12.6□□□□□ -0.39
LSM5-201ENST00000223084 GNPDA1P46926 289 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 KCNJ1P48048 391 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 ACADVLP49748 655 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 DAB2P98082 770 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 CCDC173Q0VFZ6 552 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 P3H1Q32P28 736 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 ZNF648Q5T619 568 aaPredicted RBP12.6□□□□□ -0.39
LSM5-201ENST00000223084 KCTD11Q693B1 232 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 DENND5AQ6IQ26 1287 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 MARK2Q7KZI7 788 aaKnown RBP12.6□□□□□ -0.39
LSM5-201ENST00000223084 KLHDC8BQ8IXV7 354 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 RAVER1Q8IY67 606 aaKnown RBP12.6□□□□□ -0.39
LSM5-201ENST00000223084 FSTL5Q8N475 847 aaPredicted RBP12.6□□□□□ -0.39
LSM5-201ENST00000223084 PDCD7Q8N8D1 485 aaKnown RBP12.6□□□□□ -0.39
LSM5-201ENST00000223084 COG1Q8WTW3 980 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 MAIP1Q8WWC4 291 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 COX14Q96I36 57 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 PBKQ96KB5 322 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 TBATAQ96M53 351 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 CNTNAP3BQ96NU0 1288 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 SRPK1Q96SB4 655 aaKnown RBP12.6□□□□□ -0.39
LSM5-201ENST00000223084 CNTNAP3Q9BZ76 1288 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 ETNK1Q9HBU6 452 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 PIH1D1Q9NWS0 290 aaKnown RBP12.6□□□□□ -0.39
LSM5-201ENST00000223084 SIRPGQ9P1W8 387 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 SUFUQ9UMX1 484 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 DOLKQ9UPQ8 538 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 KCTD3Q9Y597 815 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 ARL5AQ9Y689 179 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 U3KQA8 63 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 RP1P56715 2156 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 CHD6Q8TD26 2715 aa12.6□□□□□ -0.39
LSM5-201ENST00000223084 TPP1O14773 563 aa12.59□□□□□ -0.39
LSM5-201ENST00000223084 DKK1O94907 266 aa12.59□□□□□ -0.39
LSM5-201ENST00000223084 ASMTLO95671 621 aa12.59□□□□□ -0.39
LSM5-201ENST00000223084 PYGLP06737 847 aa12.59□□□□□ -0.39
LSM5-201ENST00000223084 TPH1P17752 444 aa12.59□□□□□ -0.39
LSM5-201ENST00000223084 HMGCLP35914 325 aa12.59□□□□□ -0.39
LSM5-201ENST00000223084 CLDN6P56747 220 aa12.59□□□□□ -0.39
LSM5-201ENST00000223084 DCDC1P59894 354 aa12.59□□□□□ -0.39
LSM5-201ENST00000223084 MSLNQ13421 630 aaPredicted RBP12.59□□□□□ -0.39
LSM5-201ENST00000223084 ELOCQ15369 112 aa12.59□□□□□ -0.39
LSM5-201ENST00000223084 DRICH1Q6PGQ1 229 aaPredicted RBP12.59□□□□□ -0.39
LSM5-201ENST00000223084 DHRS13Q6UX07 377 aa12.59□□□□□ -0.39
LSM5-201ENST00000223084 RAB44Q7Z6P3 723 aaPredicted RBP12.59□□□□□ -0.39
LSM5-201ENST00000223084 TAF8Q7Z7C8 310 aa12.59□□□□□ -0.39
LSM5-201ENST00000223084 RASGEF1CQ8N431 466 aa12.59□□□□□ -0.39
LSM5-201ENST00000223084 PRELID2Q8N945 189 aa12.59□□□□□ -0.39
LSM5-201ENST00000223084 FAM181AQ8N9Y4 354 aa12.59□□□□□ -0.39
LSM5-201ENST00000223084 PPP1R2P1Q96PQ5 205 aa12.59□□□□□ -0.39
LSM5-201ENST00000223084 OSBPL9Q96SU4 736 aa12.59□□□□□ -0.39
LSM5-201ENST00000223084 DUSP23Q9BVJ7 150 aa12.59□□□□□ -0.39
LSM5-201ENST00000223084 AP1M1Q9BXS5 423 aa12.59□□□□□ -0.39
LSM5-201ENST00000223084 TRABDQ9H4I3 376 aa12.59□□□□□ -0.39
LSM5-201ENST00000223084 RAD18Q9NS91 495 aa12.59□□□□□ -0.39
LSM5-201ENST00000223084 HACD3Q9P035 362 aa12.59□□□□□ -0.39
LSM5-201ENST00000223084 IL17CQ9P0M4 197 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms