RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 ADAMTSL4Q6UY14 1074 aa20.08■□□□□ 0.81
RHBDD3-201ENST00000216085 RFLNAQ6ZTI6 216 aa20.08■□□□□ 0.81
RHBDD3-201ENST00000216085 FBXO25Q8TCJ0 367 aa20.08■□□□□ 0.81
RHBDD3-201ENST00000216085 IFT81Q8WYA0 676 aa20.08■□□□□ 0.81
RHBDD3-201ENST00000216085 IL26Q9NPH9 171 aa20.08■□□□□ 0.81
RHBDD3-201ENST00000216085 TMEM74BQ9NUR3 256 aa20.08■□□□□ 0.81
RHBDD3-201ENST00000216085 CA5BQ9Y2D0 317 aa20.08■□□□□ 0.81
RHBDD3-201ENST00000216085 TNRC6BQ9UPQ9 1833 aaKnown RBP20.08■□□□□ 0.81
RHBDD3-201ENST00000216085 PLXNA2O75051 1894 aa20.08■□□□□ 0.81
RHBDD3-201ENST00000216085 FAM237BA0A1B0GVD1 139 aa20.08■□□□□ 0.8
RHBDD3-201ENST00000216085 POM121BA6NF01 834 aa20.08■□□□□ 0.8
RHBDD3-201ENST00000216085 PROB1E7EW31 1015 aa20.08■□□□□ 0.8
RHBDD3-201ENST00000216085 VILLO15195 856 aa20.08■□□□□ 0.8
RHBDD3-201ENST00000216085 TTC4O95801 387 aa20.08■□□□□ 0.8
RHBDD3-201ENST00000216085 POLBP06746 335 aa20.08■□□□□ 0.8
RHBDD3-201ENST00000216085 PGAM1P18669 254 aa20.08■□□□□ 0.8
RHBDD3-201ENST00000216085 PFN3P60673 137 aa20.08■□□□□ 0.8
RHBDD3-201ENST00000216085 FNBP1LQ5T0N5 605 aa20.08■□□□□ 0.8
RHBDD3-201ENST00000216085 Q6ZSR6 202 aa20.08■□□□□ 0.8
RHBDD3-201ENST00000216085 PLA2G15Q8NCC3 412 aa20.08■□□□□ 0.8
RHBDD3-201ENST00000216085 LRRN4CLQ8ND94 238 aa20.08■□□□□ 0.8
RHBDD3-201ENST00000216085 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.08■□□□□ 0.8
RHBDD3-201ENST00000216085 NUSAP1Q9BXS6 441 aaKnown RBP20.08■□□□□ 0.8
RHBDD3-201ENST00000216085 SCN8AQ9UQD0 1980 aa20.07■□□□□ 0.8
RHBDD3-201ENST00000216085 H0Y8X5 98 aa20.07■□□□□ 0.8
RHBDD3-201ENST00000216085 TLR4O00206 839 aa20.07■□□□□ 0.8
RHBDD3-201ENST00000216085 TP73O15350 636 aa20.07■□□□□ 0.8
RHBDD3-201ENST00000216085 MC4RP32245 332 aa20.07■□□□□ 0.8
RHBDD3-201ENST00000216085 TRIM23P36406 574 aa20.07■□□□□ 0.8
RHBDD3-201ENST00000216085 PDIA2Q13087 525 aaKnown RBP20.07■□□□□ 0.8
RHBDD3-201ENST00000216085 PTPRCAPQ14761 206 aa20.07■□□□□ 0.8
RHBDD3-201ENST00000216085 TRIM61Q5EBN2 209 aa20.07■□□□□ 0.8
RHBDD3-201ENST00000216085 AFTPHQ6ULP2 937 aa20.07■□□□□ 0.8
RHBDD3-201ENST00000216085 HEATR4Q86WZ0 1026 aa20.07■□□□□ 0.8
RHBDD3-201ENST00000216085 PHYKPLQ8IUZ5 450 aa20.07■□□□□ 0.8
RHBDD3-201ENST00000216085 GPR161Q8N6U8 529 aaKnown RBP20.07■□□□□ 0.8
RHBDD3-201ENST00000216085 RUBCNQ92622 972 aa20.07■□□□□ 0.8
RHBDD3-201ENST00000216085 ULK4Q96C45 1275 aa20.07■□□□□ 0.8
RHBDD3-201ENST00000216085 CDKN2AIPNLQ96HQ2 116 aa20.07■□□□□ 0.8
RHBDD3-201ENST00000216085 SIGLEC10Q96LC7 697 aa20.07■□□□□ 0.8
RHBDD3-201ENST00000216085 BMFQ96LC9 184 aa20.07■□□□□ 0.8
RHBDD3-201ENST00000216085 APOOQ9BUR5 198 aa20.07■□□□□ 0.8
RHBDD3-201ENST00000216085 SLC6A14Q9UN76 642 aa20.07■□□□□ 0.8
RHBDD3-201ENST00000216085 RPS6KL1Q9Y6S9 549 aa20.07■□□□□ 0.8
RHBDD3-201ENST00000216085 K7ESM1 405 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 LRP3O75074 770 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 SRP72O76094 671 aaKnown RBP20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 HOXC4P09017 264 aaPredicted RBP20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 MYCLP1P12525 358 aaPredicted RBP20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 CSNK1EP49674 416 aaKnown RBP20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 CDK3Q00526 305 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 NHLH1Q02575 133 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 ACVR1Q04771 509 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 PDE1CQ14123 709 aaPredicted RBP20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 SLC23A3Q6PIS1 610 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 MPP5Q8N3R9 675 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 OR13H1Q8NG92 308 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 OR13J1Q8NGT2 312 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 OR6P1Q8NGX9 317 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 UBXN4Q92575 508 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 ZNF669Q96BR6 464 aaPredicted RBP20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 HIC2Q96JB3 615 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 VPS35Q96QK1 796 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 TTC1Q99614 292 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 EBNA1BP2Q99848 306 aaKnown RBP20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 ASB8Q9H765 288 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 GDF3Q9NR23 364 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 OR1A2Q9Y585 309 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 SLCO1B1Q9Y6L6 691 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 DOCK9Q9BZ29 2069 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 MYLKQ15746 1914 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 A0A1W2PR77 199 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 KHNYNO15037 678 aaKnown RBP20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 USP1O94782 785 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 SYPP08247 313 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 PSMA3P25788 255 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 KIAA1024LP59773 190 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 NFATC4Q14934 902 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 GPR33Q49SQ1 333 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 IL27RAQ6UWB1 636 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 ZDHHC24Q6UX98 284 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 SNX20Q7Z614 316 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 CCDC25Q86WR0 208 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 GABPB2Q8TAK5 448 aaPredicted RBP20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 GDAP1Q8TB36 358 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 ZNF398Q8TD17 642 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 TBATAQ96M53 351 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 FMO2Q99518 471 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 TEX101Q9BY14 249 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 ZDHHC5Q9C0B5 715 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 TREX1Q9NSU2 369 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 SMOXQ9NWM0 555 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 CRLS1Q9UJA2 301 aa20.06■□□□□ 0.8
RHBDD3-201ENST00000216085 BHMG1C9JSJ3 638 aaPredicted RBP20.05■□□□□ 0.8
RHBDD3-201ENST00000216085 E7ESA3 106 aa20.05■□□□□ 0.8
RHBDD3-201ENST00000216085 CACNG1Q06432 222 aa20.05■□□□□ 0.8
RHBDD3-201ENST00000216085 NFATC2Q13469 925 aa20.05■□□□□ 0.8
RHBDD3-201ENST00000216085 TRADDQ15628 312 aa20.05■□□□□ 0.8
RHBDD3-201ENST00000216085 CHRNA6Q15825 494 aa20.05■□□□□ 0.8
RHBDD3-201ENST00000216085 ZRANB3Q5FWF4 1079 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms