RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 TRAF3Q13114 568 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 COMMD2Q86X83 199 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 NETO2Q8NC67 525 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 SLC4A5Q9BY07 1137 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 NPEPPSL1A6NEC2 478 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 SSR2P43308 183 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 LAPTM5Q13571 262 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 DBF4BQ8NFT6 615 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 NTAN1Q96AB6 310 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 TEFMQ96QE5 360 aaKnown RBP23.09■■□□□ 1.29
TARBP1-201ENST00000040877 MRPS26Q9BYN8 205 aaKnown RBP23.09■■□□□ 1.29
TARBP1-201ENST00000040877 SLC17A7Q9P2U7 560 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 LRRC14BA6NHZ5 514 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 PTSQ03393 145 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 GAD2Q05329 585 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 ARHGAP1Q07960 439 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 UBAP2LQ14157 1087 aaKnown RBP23.09■■□□□ 1.29
TARBP1-201ENST00000040877 IFNL1Q8IU54 200 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 AP2M1Q96CW1 435 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 GPR88Q9GZN0 384 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 KLHL1Q9NR64 748 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 EXD2Q9NVH0 621 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 PCDHGB3Q9Y5G1 929 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 ATP6AP2A0A1C7CYW4 349 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 EFCAB10A6NFE3 127 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 ATP6AP2O75787 350 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 SLC6A2P23975 617 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 ADSSP30520 456 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 SPESP1Q6UW49 350 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 NIPA2Q8N8Q9 360 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 MYDGFQ969H8 173 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 PPP1R14AQ96A00 147 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 VPS35Q96QK1 796 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 HAPLN3Q96S86 360 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 C11orf84Q9BUA3 381 aaPredicted RBP23.09■■□□□ 1.29
TARBP1-201ENST00000040877 SGK2Q9HBY8 427 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 GMPPBQ9Y5P6 360 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 CPQQ9Y646 472 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 DHRS12A0PJE2 317 aa23.08■■□□□ 1.29
TARBP1-201ENST00000040877 BMP7P18075 431 aa23.08■■□□□ 1.29
TARBP1-201ENST00000040877 UGT2B15P54855 530 aa23.08■■□□□ 1.29
TARBP1-201ENST00000040877 ACAP2Q15057 778 aa23.08■■□□□ 1.29
TARBP1-201ENST00000040877 CPTPQ5TA50 214 aa23.08■■□□□ 1.29
TARBP1-201ENST00000040877 MCRS1Q96EZ8 462 aa23.08■■□□□ 1.29
TARBP1-201ENST00000040877 HEPHQ9BQS7 1158 aa23.08■■□□□ 1.29
TARBP1-201ENST00000040877 AARSD1Q9BTE6 412 aaKnown RBP23.08■■□□□ 1.29
TARBP1-201ENST00000040877 DUS2Q9NX74 493 aaKnown RBP23.08■■□□□ 1.29
TARBP1-201ENST00000040877 MIOSQ9NXC5 875 aa23.08■■□□□ 1.29
TARBP1-201ENST00000040877 IGSF9Q9P2J2 1179 aa23.08■■□□□ 1.29
TARBP1-201ENST00000040877 H3BNH8 94 aa23.08■■□□□ 1.29
TARBP1-201ENST00000040877 LYPLA1O75608 230 aaPredicted RBP23.08■■□□□ 1.29
TARBP1-201ENST00000040877 CHRNB2P17787 502 aa23.08■■□□□ 1.29
TARBP1-201ENST00000040877 COX10Q12887 443 aa23.08■■□□□ 1.29
TARBP1-201ENST00000040877 TSTD2Q5T7W7 516 aa23.08■■□□□ 1.29
TARBP1-201ENST00000040877 REXO5Q96IC2 774 aaKnown RBP23.08■■□□□ 1.29
TARBP1-201ENST00000040877 RIPOR3Q96MK2 946 aa23.08■■□□□ 1.29
TARBP1-201ENST00000040877 HDHD2Q9H0R4 259 aa23.08■■□□□ 1.29
TARBP1-201ENST00000040877 POLR3HQ9Y535 204 aaPredicted RBP23.08■■□□□ 1.29
TARBP1-201ENST00000040877 LTBP3Q9NS15 1303 aa23.08■■□□□ 1.29
TARBP1-201ENST00000040877 NRP2O60462 931 aa23.08■■□□□ 1.29
TARBP1-201ENST00000040877 EPHX1P07099 455 aa23.08■■□□□ 1.29
TARBP1-201ENST00000040877 COL6A1P12109 1028 aa23.08■■□□□ 1.29
TARBP1-201ENST00000040877 C8orf4Q9NR00 106 aa23.08■■□□□ 1.29
TARBP1-201ENST00000040877 PNPOQ9NVS9 261 aa23.08■■□□□ 1.29
TARBP1-201ENST00000040877 MRTO4Q9UKD2 239 aaKnown RBP23.08■■□□□ 1.29
TARBP1-201ENST00000040877 COLEC10Q9Y6Z7 277 aa23.08■■□□□ 1.29
TARBP1-201ENST00000040877 ABRAXAS1Q6UWZ7 409 aa23.08■■□□□ 1.28
TARBP1-201ENST00000040877 TDRPQ86YL5 185 aa23.08■■□□□ 1.28
TARBP1-201ENST00000040877 DDX18Q9NVP1 670 aaKnown RBP23.08■■□□□ 1.28
TARBP1-201ENST00000040877 CHURC1-FNTBB4DL54 471 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 UNGP13051 313 aaPredicted RBP23.07■■□□□ 1.28
TARBP1-201ENST00000040877 CAP1Q01518 475 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 ERICH5Q6P6B1 374 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 ECHDC2Q86YB7 292 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 OR10G6Q8NH81 332 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 ZNF384Q8TF68 577 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 BRI3BPQ8WY22 251 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 SLC7A4O43246 635 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 SUV39H1O43463 412 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 PIAS1O75925 651 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 STBD1O95210 358 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 PPIDQ08752 370 aaKnown RBP23.07■■□□□ 1.28
TARBP1-201ENST00000040877 MTAPQ13126 283 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 SLC9A5Q14940 896 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 RSBN1Q5VWQ0 802 aaPredicted RBP23.07■■□□□ 1.28
TARBP1-201ENST00000040877 GALNT18Q6P9A2 607 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 MECRQ9BV79 373 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 OR6B1O95007 311 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 PRAMEF1O95521 474 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 OGNP20774 298 aaKnown RBP23.07■■□□□ 1.28
TARBP1-201ENST00000040877 TAF13Q15543 124 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 ATP13A5Q4VNC0 1218 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 SCAIQ8N9R8 606 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 AGAP11Q8TF27 550 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 FNDC11Q9BVV2 318 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 C6orf62Q9GZU0 229 aaPredicted RBP23.07■■□□□ 1.28
TARBP1-201ENST00000040877 MUC13Q9H3R2 512 aa23.07■■□□□ 1.28
TARBP1-201ENST00000040877 SP100P23497 879 aaPredicted RBP23.07■■□□□ 1.28
TARBP1-201ENST00000040877 TPP2P29144 1249 aaPredicted RBP23.07■■□□□ 1.28
TARBP1-201ENST00000040877 NRF1Q16656 503 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms