RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 KIAA1191Q96A73 305 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 PTERQ96BW5 349 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 SGF29Q96ES7 293 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 RPL10LQ96L21 214 aaKnown RBP14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 MCCC1Q96RQ3 725 aaPredicted RBP14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 BTBD10Q9BSF8 475 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 TBC1D10AQ9BXI6 508 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 UNKQ9C0B0 810 aaKnown RBP14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 P2RY12Q9H244 342 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 SUV39H2Q9H5I1 410 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 ALG9Q9H6U8 611 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 BPIFA1Q9NP55 256 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 ARMCX1Q9P291 453 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 TAGLN3Q9UI15 199 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 APPL1Q9UKG1 709 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 MRPS23Q9Y3D9 190 aaKnown RBP14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 PCDHB1Q9Y5F3 818 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 SLC30A1Q9Y6M5 507 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 DOCK6Q96HP0 2047 aa14.25□□□□□ -0.13
RTFDC1-201ENST00000023939 TRBV5-4A0A0C4DH59 114 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 NEMP2A6NFY4 417 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 GAPDHSO14556 408 aaPredicted RBP14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 TPBGLP0DKB5 382 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 SP100P23497 879 aaPredicted RBP14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 PPARGP37231 505 aaPredicted RBP14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 KCNC1P48547 511 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 RAD51Q06609 339 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 CTSL3PQ5NE16 218 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 LYPLAL1Q5VWZ2 237 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 ZSWIM9Q86XI8 627 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 PARP9Q8IXQ6 854 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 AHI1Q8N157 1196 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 CCNYL1Q8N7R7 359 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 SCRN2Q96FV2 425 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 FAR2Q96K12 515 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 ATOH8Q96SQ7 321 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 CCDC28BQ9BUN5 200 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 EML4Q9HC35 981 aaKnown RBP14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 ZDHHC2Q9UIJ5 367 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 C1orf232A0A0U1RR37 186 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 GRXCR1A8MXD5 290 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 PER2O15055 1255 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 DIAPH2O60879 1101 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 SMIM24O75264 130 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 HNRNPH1P31943 449 aaKnown RBP14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 GKP32189 559 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 CCNHP51946 323 aaPredicted RBP14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 ALDH18A1P54886 795 aaKnown RBP14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 GRAMD4Q6IC98 578 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 FAM109BQ6ICB4 259 aaPredicted RBP14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 PAQR3Q6TCH7 311 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 TPRG1Q6ZUI0 275 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 FRMD7Q6ZUT3 714 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 SNX20Q7Z614 316 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 RYBPQ8N488 228 aaPredicted RBP14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 STAG3L4Q8TBR4 150 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 MAPK15Q8TD08 544 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 SMG7Q92540 1137 aaKnown RBP14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 TTC1Q99614 292 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 LMAN2LQ9H0V9 348 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 MTF2Q9Y483 593 aaPredicted RBP14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 WNT6Q9Y6F9 365 aa14.24□□□□□ -0.13
RTFDC1-201ENST00000023939 GOLGA8CPA6NN73 597 aa14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 AGAP14A8MT82 685 aa14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 PRR5-ARHGAP8B1AHC4 643 aa14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 H3BMM5 538 aa14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 PRMT5O14744 637 aaPredicted RBP14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 HOXC11O43248 304 aaPredicted RBP14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 KERAO60938 352 aa14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 MTHFD2P13995 350 aa14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 ITGALP20701 1170 aa14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 CCR10P46092 362 aa14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 NAA20P61599 178 aa14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 HERVK_113P63132 956 aa14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 ARHGAP8P85298 464 aa14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 DUSP6Q16828 381 aa14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 GPR33Q49SQ1 333 aa14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 C9orf50Q5SZB4 431 aa14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 ZNF697Q5TEC3 545 aa14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 VWA5B1Q5TIE3 1220 aa14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 UGT3A1Q6NUS8 523 aa14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 DPY19L3Q6ZPD9 716 aa14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 USP45Q70EL2 814 aa14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 ITFG1Q8TB96 612 aa14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 ASB2Q96Q27 587 aa14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 GPR21Q99679 349 aa14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 MIPEPQ99797 713 aa14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 ERVK-6Q9BXR3 956 aa14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 GSTO2Q9H4Y5 243 aa14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 IL26Q9NPH9 171 aa14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 TCF7L2Q9NQB0 619 aa14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 TAS2R1Q9NYW7 299 aa14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 SLCO3A1Q9UIG8 710 aa14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 ERVW-1Q9UQF0 538 aa14.23□□□□□ -0.13
RTFDC1-201ENST00000023939 ZNF106Q9H2Y7 1883 aaKnown RBP14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 TRPC5OSA6NMA1 111 aa14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 SLC22A2O15244 555 aa14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 OR1I1O60431 355 aa14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 PRAMEF1O95521 474 aa14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 TSPAN12O95859 305 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 328.7 ms