RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 PTSQ03393 145 aa17.54■□□□□ 0.4
PHGDH-232ENST00000641947 INSCQ1MX18 579 aa17.54■□□□□ 0.4
PHGDH-232ENST00000641947 HNRNPA1L2Q32P51 320 aaKnown RBP17.54■□□□□ 0.4
PHGDH-232ENST00000641947 C9orf64Q5T6V5 341 aa17.54■□□□□ 0.4
PHGDH-232ENST00000641947 TPRG1Q6ZUI0 275 aa17.54■□□□□ 0.4
PHGDH-232ENST00000641947 RAPH1Q70E73 1250 aa17.54■□□□□ 0.4
PHGDH-232ENST00000641947 PIM3Q86V86 326 aa17.54■□□□□ 0.4
PHGDH-232ENST00000641947 STK40Q8N2I9 435 aa17.54■□□□□ 0.4
PHGDH-232ENST00000641947 GABPB2Q8TAK5 448 aaPredicted RBP17.54■□□□□ 0.4
PHGDH-232ENST00000641947 KCTD4Q8WVF5 259 aa17.54■□□□□ 0.4
PHGDH-232ENST00000641947 CABS1Q96KC9 395 aa17.54■□□□□ 0.4
PHGDH-232ENST00000641947 NECTIN4Q96NY8 510 aa17.54■□□□□ 0.4
PHGDH-232ENST00000641947 TBC1D3BA6NDS4 549 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 C1SP09871 688 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 CHRM1P11229 460 aaPredicted RBP17.53■□□□□ 0.4
PHGDH-232ENST00000641947 TIMP2P16035 220 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 STMN1P16949 149 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 BGNP21810 368 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 IL12RB1P42701 662 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 POLD2P49005 469 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 SF3A3Q12874 501 aaKnown RBP eCLIP17.53■□□□□ 0.41e-9■■■■□ 22.2
PHGDH-232ENST00000641947 ZRANB3Q5FWF4 1079 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 EGFLAMQ63HQ2 1017 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 TMEM207Q6UWW9 146 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 FAM151BQ6UXP7 276 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 KYAT3Q6YP21 454 aaKnown RBP17.53■□□□□ 0.4
PHGDH-232ENST00000641947 FAM47EQ6ZV65 393 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 USP45Q70EL2 814 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 MTSS1LQ765P7 747 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 CNPY4Q8N129 248 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 SPATA6LQ8N4H0 392 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 EZH1Q92800 747 aaPredicted RBP17.53■□□□□ 0.4
PHGDH-232ENST00000641947 ERLEC1Q96DZ1 483 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 LRCH3Q96II8 777 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 IL26Q9NPH9 171 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 SLC8A2Q9UPR5 921 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 A0A1W2PPC1 479 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 ERICH4A6NGS2 130 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 OR1I1O60431 355 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 EIF2DP41214 584 aaKnown RBP17.53■□□□□ 0.4
PHGDH-232ENST00000641947 PCLAFQ15004 111 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 AAK1Q2M2I8 961 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 BRAT1Q6PJG6 821 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 TMEM151AQ8N4L1 468 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 KDM1BQ8NB78 822 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 GPR26Q8NDV2 337 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 LRRC8CQ8TDW0 803 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 GPR78Q96P69 363 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 UNKQ9C0B0 810 aaKnown RBP17.53■□□□□ 0.4
PHGDH-232ENST00000641947 INTS10Q9NVR2 710 aaKnown RBP17.53■□□□□ 0.4
PHGDH-232ENST00000641947 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.53■□□□□ 0.4
PHGDH-232ENST00000641947 MED16Q9Y2X0 877 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 F5P12259 2224 aa17.53■□□□□ 0.4
PHGDH-232ENST00000641947 GOLGA8CPA6NN73 597 aa17.52■□□□□ 0.4
PHGDH-232ENST00000641947 PRAMEF1O95521 474 aa17.52■□□□□ 0.4
PHGDH-232ENST00000641947 BPGMP07738 259 aa17.52■□□□□ 0.4
PHGDH-232ENST00000641947 GSTA1P08263 222 aa17.52■□□□□ 0.4
PHGDH-232ENST00000641947 SBK3P0C264 359 aa17.52■□□□□ 0.4
PHGDH-232ENST00000641947 FDXRP22570 491 aa17.52■□□□□ 0.4
PHGDH-232ENST00000641947 PMLP29590 882 aa17.52■□□□□ 0.4
PHGDH-232ENST00000641947 ZNF805Q5CZA5 627 aa17.52■□□□□ 0.4
PHGDH-232ENST00000641947 PARS2Q7L3T8 475 aaKnown RBP17.52■□□□□ 0.4
PHGDH-232ENST00000641947 SDCCAG8Q86SQ7 713 aaPredicted RBP17.52■□□□□ 0.4
PHGDH-232ENST00000641947 BIRC8Q96P09 236 aa17.52■□□□□ 0.4
PHGDH-232ENST00000641947 PCDH12Q9NPG4 1184 aa17.52■□□□□ 0.4
PHGDH-232ENST00000641947 SIRPGQ9P1W8 387 aa17.52■□□□□ 0.4
PHGDH-232ENST00000641947 THAP10Q9P2Z0 257 aaPredicted RBP17.52■□□□□ 0.4
PHGDH-232ENST00000641947 ANKRD6Q9Y2G4 727 aa17.52■□□□□ 0.4
PHGDH-232ENST00000641947 VWA7Q9Y334 891 aa17.52■□□□□ 0.4
PHGDH-232ENST00000641947 EDDM13A0A1B0GTR0 161 aa17.51■□□□□ 0.39
PHGDH-232ENST00000641947 C16orf96A6NNT2 1141 aa17.51■□□□□ 0.39
PHGDH-232ENST00000641947 UPK3BL1B0FP48 263 aa17.51■□□□□ 0.39
PHGDH-232ENST00000641947 C2CD4DB7Z1M9 353 aa17.51■□□□□ 0.39
PHGDH-232ENST00000641947 UPK3BL2E5RIL1 263 aa17.51■□□□□ 0.39
PHGDH-232ENST00000641947 SPINT1O43278 529 aa17.51■□□□□ 0.39
PHGDH-232ENST00000641947 SRP72O76094 671 aaKnown RBP17.51■□□□□ 0.39
PHGDH-232ENST00000641947 CRABP2P29373 138 aa17.51■□□□□ 0.39
PHGDH-232ENST00000641947 CACNG1Q06432 222 aa17.51■□□□□ 0.39
PHGDH-232ENST00000641947 SETMARQ53H47 684 aaPredicted RBP17.51■□□□□ 0.39
PHGDH-232ENST00000641947 TAF1BQ53T94 588 aaPredicted RBP17.51■□□□□ 0.39
PHGDH-232ENST00000641947 TXNDC11Q6PKC3 985 aa17.51■□□□□ 0.39
PHGDH-232ENST00000641947 SERPINA13PQ6UXR4 307 aa17.51■□□□□ 0.39
PHGDH-232ENST00000641947 CPLX4Q7Z7G2 160 aa17.51■□□□□ 0.39
PHGDH-232ENST00000641947 NAT14Q8WUY8 206 aa17.51■□□□□ 0.39
PHGDH-232ENST00000641947 ANKRD49Q8WVL7 239 aa17.51■□□□□ 0.39
PHGDH-232ENST00000641947 NXNL1Q96CM4 212 aa17.51■□□□□ 0.39
PHGDH-232ENST00000641947 FAM129BQ96TA1 746 aa17.51■□□□□ 0.39
PHGDH-232ENST00000641947 AARSD1Q9BTE6 412 aaKnown RBP17.51■□□□□ 0.39
PHGDH-232ENST00000641947 OSBPL1AQ9BXW6 950 aa17.51■□□□□ 0.39
PHGDH-232ENST00000641947 IGSF5Q9NSI5 407 aa17.51■□□□□ 0.39
PHGDH-232ENST00000641947 CACNA2D2Q9NY47 1150 aa17.51■□□□□ 0.39
PHGDH-232ENST00000641947 TLK1Q9UKI8 766 aa17.51■□□□□ 0.39
PHGDH-232ENST00000641947 ACOT9Q9Y305 439 aa17.51■□□□□ 0.39
PHGDH-232ENST00000641947 A0A1W2PQ67 120 aa17.51■□□□□ 0.39
PHGDH-232ENST00000641947 UBA6A0AVT1 1052 aaPredicted RBP17.51■□□□□ 0.39
PHGDH-232ENST00000641947 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.51■□□□□ 0.39
PHGDH-232ENST00000641947 TK2O00142 265 aa17.51■□□□□ 0.39
PHGDH-232ENST00000641947 KCNA4P22459 653 aa17.51■□□□□ 0.39
PHGDH-232ENST00000641947 ALDH3A1P30838 453 aa17.51■□□□□ 0.39
PHGDH-232ENST00000641947 FMO4P31512 558 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms