RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 MIER2Q8N344 545 aa16.52■□□□□ 0.23
HNRNPU-228ENST00000640306 SEPHS2Q99611 448 aa16.52■□□□□ 0.23
HNRNPU-228ENST00000640306 ACBD6Q9BR61 282 aa16.52■□□□□ 0.23
HNRNPU-228ENST00000640306 C1orf50Q9BV19 199 aa16.52■□□□□ 0.23
HNRNPU-228ENST00000640306 ADI1Q9BV57 179 aa16.52■□□□□ 0.23
HNRNPU-228ENST00000640306 AP5M1Q9H0R1 490 aa16.52■□□□□ 0.23
HNRNPU-228ENST00000640306 TDRKHQ9Y2W6 561 aaKnown RBP16.52■□□□□ 0.23
HNRNPU-228ENST00000640306 SUPT3HB4E1H0 165 aa16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 FXYD1O00168 92 aa16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 EI24O14681 340 aa16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 SUPT3HO75486 399 aa16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 CRCPO75575 148 aa16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 SLC2A3P11169 496 aa16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 CD1DP15813 335 aa16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 RENBPP51606 427 aa16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 PLCL1Q15111 1095 aa16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 ADRM1Q16186 407 aa16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 BRMS1LQ5PSV4 323 aa16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 BORAQ6PGQ7 559 aa16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 PGBD5Q8N414 524 aa16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 NUDT8Q8WV74 236 aa16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 STON2Q8WXE9 905 aa16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 SMIM14Q96QK8 99 aa16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 PADI4Q9UM07 663 aa16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 FAF1Q9UNN5 650 aaPredicted RBP16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 HAS3O00219 553 aa16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 ARPC2O15144 300 aa16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 SLC6A2P23975 617 aa16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 PSMA4P25789 261 aaKnown RBP16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 CYP2C18P33260 490 aa16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 ENTPD1P49961 510 aa16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 MRPS6P82932 125 aaKnown RBP16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 EFEMP1Q12805 493 aa16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 EIF4EBP2Q13542 120 aaPredicted RBP16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 GPR141Q7Z602 305 aa16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 ANKFN1Q8N957 763 aa16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 SMOC2Q9H3U7 446 aa16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 TIMMDC1Q9NPL8 285 aa16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 CCM2LQ9NUG4 571 aaPredicted RBP16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 POLG2Q9UHN1 485 aa16.51■□□□□ 0.23
HNRNPU-228ENST00000640306 KPNA6O60684 536 aa16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 ZNF865P0CJ78 1059 aaPredicted RBP16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 IL10P22301 178 aa16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 MLLT6P55198 1093 aaPredicted RBP16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 CREB5Q02930 508 aa16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 SLC39A12Q504Y0 691 aa16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 ERI1Q8IV48 349 aaKnown RBP16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 TSPAN18Q96SJ8 248 aa16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 UHRF1Q96T88 793 aaPredicted RBP16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 HBEGFQ99075 208 aa16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 PARK7Q99497 189 aaKnown RBP16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 SEMA3CQ99985 751 aa16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 CCDC162PA2VCL2 907 aa16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 LDB2O43679 373 aa16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 MGEA5O60502 916 aa16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 CLASP2O75122 1294 aaKnown RBP16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 BMP2P12643 396 aa16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 MTHFD2P13995 350 aa16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 FASP25445 335 aa16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 EEF1DP29692 281 aaKnown RBP16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 HOXC13P31276 330 aa16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 ARL1P40616 181 aaPredicted RBP16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 TIAL1Q01085 375 aaKnown RBP eCLIP16.5■□□□□ 0.231e-8■■■□□ 16.7
HNRNPU-228ENST00000640306 MERTKQ12866 999 aa16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 RAP1GAP2Q684P5 730 aa16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 KLHL35Q6PF15 583 aa16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 CXCL17Q6UXB2 119 aa16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 MAGEE2Q8TD90 523 aaPredicted RBP16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 LRRC58Q96CX6 371 aa16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 ACOX2Q99424 681 aa16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 IKZF3Q9UKT9 509 aa16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 SLC8A2Q9UPR5 921 aa16.5■□□□□ 0.23
HNRNPU-228ENST00000640306 ENPP3O14638 875 aa16.49■□□□□ 0.23
HNRNPU-228ENST00000640306 SOAT2O75908 522 aa16.49■□□□□ 0.23
HNRNPU-228ENST00000640306 GLP2RO95838 553 aa16.49■□□□□ 0.23
HNRNPU-228ENST00000640306 TFPTP0C1Z6 253 aa16.49■□□□□ 0.23
HNRNPU-228ENST00000640306 CD52P31358 61 aa16.49■□□□□ 0.23
HNRNPU-228ENST00000640306 GRK4P32298 578 aa16.49■□□□□ 0.23
HNRNPU-228ENST00000640306 ACVRL1P37023 503 aa16.49■□□□□ 0.23
HNRNPU-228ENST00000640306 AGTR2P50052 363 aa16.49■□□□□ 0.23
HNRNPU-228ENST00000640306 CPT1AP50416 773 aa16.49■□□□□ 0.23
HNRNPU-228ENST00000640306 NFYCQ13952 458 aa16.49■□□□□ 0.23
HNRNPU-228ENST00000640306 INPP5AQ14642 412 aa16.49■□□□□ 0.23
HNRNPU-228ENST00000640306 C16orf72Q14CZ0 275 aa16.49■□□□□ 0.23
HNRNPU-228ENST00000640306 FSCN1Q16658 493 aaKnown RBP16.49■□□□□ 0.23
HNRNPU-228ENST00000640306 GTF3C2Q8WUA4 911 aaPredicted RBP16.49■□□□□ 0.23
HNRNPU-228ENST00000640306 L3HYPDHQ96EM0 354 aa16.49■□□□□ 0.23
HNRNPU-228ENST00000640306 GPATCH1Q9BRR8 931 aaKnown RBP16.49■□□□□ 0.23
HNRNPU-228ENST00000640306 VPS45Q9NRW7 570 aa16.49■□□□□ 0.23
HNRNPU-228ENST00000640306 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.49■□□□□ 0.233e-9■■□□□ 11.9
HNRNPU-228ENST00000640306 CD3EAPO15446 510 aaKnown RBP16.49■□□□□ 0.23
HNRNPU-228ENST00000640306 CHRNA1P02708 482 aa16.49■□□□□ 0.23
HNRNPU-228ENST00000640306 FMO4P31512 558 aa16.49■□□□□ 0.23
HNRNPU-228ENST00000640306 ACADVLP49748 655 aa16.49■□□□□ 0.23
HNRNPU-228ENST00000640306 TSPY1Q01534 308 aa16.49■□□□□ 0.23
HNRNPU-228ENST00000640306 CAMK1DQ8IU85 385 aa16.49■□□□□ 0.23
HNRNPU-228ENST00000640306 CCDC117Q8IWD4 279 aaPredicted RBP16.49■□□□□ 0.23
HNRNPU-228ENST00000640306 IGSF8Q969P0 613 aa16.49■□□□□ 0.23
HNRNPU-228ENST00000640306 C12orf43Q96C57 262 aaKnown RBP16.49■□□□□ 0.23
HNRNPU-228ENST00000640306 ROPN1LQ96C74 230 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms