RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 CPED1A4D0V7 1026 aa17.64■□□□□ 0.41
PTPN11-207ENST00000639857 GOLGA6CA6NDK9 693 aa17.64■□□□□ 0.41
PTPN11-207ENST00000639857 GOLGA6BA6NDN3 693 aa17.64■□□□□ 0.41
PTPN11-207ENST00000639857 APOC4-APOC2K7ER74 178 aa17.64■□□□□ 0.41
PTPN11-207ENST00000639857 APOC2P02655 101 aa17.64■□□□□ 0.41
PTPN11-207ENST00000639857 CEACAM5P06731 702 aa17.64■□□□□ 0.41
PTPN11-207ENST00000639857 GOLGA6DP0CG33 693 aa17.64■□□□□ 0.41
PTPN11-207ENST00000639857 MYF5P13349 255 aa17.64■□□□□ 0.41
PTPN11-207ENST00000639857 CTNNA2P26232 953 aa17.64■□□□□ 0.41
PTPN11-207ENST00000639857 CLDN6P56747 220 aa17.64■□□□□ 0.41
PTPN11-207ENST00000639857 PTPRRQ15256 657 aa17.64■□□□□ 0.41
PTPN11-207ENST00000639857 KCTD16Q68DU8 428 aa17.64■□□□□ 0.41
PTPN11-207ENST00000639857 KIAA1328Q86T90 577 aa17.64■□□□□ 0.41
PTPN11-207ENST00000639857 GPBAR1Q8TDU6 330 aa17.64■□□□□ 0.41
PTPN11-207ENST00000639857 SCARF2Q96GP6 870 aaPredicted RBP17.64■□□□□ 0.41
PTPN11-207ENST00000639857 QKIQ96PU8 341 aaKnown RBP eCLIP17.64■□□□□ 0.416e-6■■■■□ 20.5
PTPN11-207ENST00000639857 GSDMCQ9BYG8 508 aa17.64■□□□□ 0.41
PTPN11-207ENST00000639857 MAGEE1Q9HCI5 957 aa17.64■□□□□ 0.41
PTPN11-207ENST00000639857 MRPL40Q9NQ50 206 aaKnown RBP17.64■□□□□ 0.41
PTPN11-207ENST00000639857 RAD18Q9NS91 495 aa17.64■□□□□ 0.41
PTPN11-207ENST00000639857 GOLGA6AQ9NYA3 693 aa17.64■□□□□ 0.41
PTPN11-207ENST00000639857 NFKBIL1Q9UBC1 381 aaPredicted RBP17.64■□□□□ 0.41
PTPN11-207ENST00000639857 SAE1Q9UBE0 346 aaPredicted RBP17.64■□□□□ 0.41
PTPN11-207ENST00000639857 TAF4O00268 1085 aa17.63■□□□□ 0.41
PTPN11-207ENST00000639857 ZNF189O75820 626 aaPredicted RBP17.63■□□□□ 0.41
PTPN11-207ENST00000639857 CLDN7O95471 211 aa17.63■□□□□ 0.41
PTPN11-207ENST00000639857 CETN2P41208 172 aa17.63■□□□□ 0.41
PTPN11-207ENST00000639857 SPINT3P49223 89 aa17.63■□□□□ 0.41
PTPN11-207ENST00000639857 NAP1L1P55209 391 aaKnown RBP17.63■□□□□ 0.41
PTPN11-207ENST00000639857 DCDC1P59894 354 aa17.63■□□□□ 0.41
PTPN11-207ENST00000639857 CDK18Q07002 472 aa17.63■□□□□ 0.41
PTPN11-207ENST00000639857 ILF3Q12906 894 aaKnown RBP eCLIP17.63■□□□□ 0.41
PTPN11-207ENST00000639857 HENMT1Q5T8I9 393 aaKnown RBP17.63■□□□□ 0.41
PTPN11-207ENST00000639857 OGFOD3Q6PK18 319 aa17.63■□□□□ 0.41
PTPN11-207ENST00000639857 TAF8Q7Z7C8 310 aa17.63■□□□□ 0.41
PTPN11-207ENST00000639857 SYCE1Q8N0S2 351 aa17.63■□□□□ 0.41
PTPN11-207ENST00000639857 LRRC57Q8N9N7 239 aa17.63■□□□□ 0.41
PTPN11-207ENST00000639857 KYQ8NBH2 561 aa17.63■□□□□ 0.41
PTPN11-207ENST00000639857 ACRBPQ8NEB7 543 aa17.63■□□□□ 0.41
PTPN11-207ENST00000639857 GPR156Q8NFN8 814 aa17.63■□□□□ 0.41
PTPN11-207ENST00000639857 HIC2Q96JB3 615 aa17.63■□□□□ 0.41
PTPN11-207ENST00000639857 FERMT1Q9BQL6 677 aa17.63■□□□□ 0.41
PTPN11-207ENST00000639857 CEP41Q9BYV8 373 aa17.63■□□□□ 0.41
PTPN11-207ENST00000639857 LACRTQ9GZZ8 138 aa17.63■□□□□ 0.41
PTPN11-207ENST00000639857 TMEM168Q9H0V1 697 aa17.63■□□□□ 0.41
PTPN11-207ENST00000639857 CARS2Q9HA77 564 aaKnown RBP17.63■□□□□ 0.41
PTPN11-207ENST00000639857 ZZEF1O43149 2961 aa17.63■□□□□ 0.41
PTPN11-207ENST00000639857 NDST3O95803 873 aa17.62■□□□□ 0.41
PTPN11-207ENST00000639857 EPOP01588 193 aa17.62■□□□□ 0.41
PTPN11-207ENST00000639857 PNLIPP16233 465 aa17.62■□□□□ 0.41
PTPN11-207ENST00000639857 RWDD2BP57060 319 aa17.62■□□□□ 0.41
PTPN11-207ENST00000639857 ADCY2Q08462 1091 aa17.62■□□□□ 0.41
PTPN11-207ENST00000639857 CYP4F3Q08477 520 aa17.62■□□□□ 0.41
PTPN11-207ENST00000639857 WASHC5Q12768 1159 aa17.62■□□□□ 0.41
PTPN11-207ENST00000639857 KIF5AQ12840 1032 aa17.62■□□□□ 0.41
PTPN11-207ENST00000639857 NOMO1Q15155 1222 aa17.62■□□□□ 0.41
PTPN11-207ENST00000639857 PERM1Q5SV97 790 aa17.62■□□□□ 0.41
PTPN11-207ENST00000639857 CCDC70Q6NSX1 233 aa17.62■□□□□ 0.41
PTPN11-207ENST00000639857 NYAP1Q6ZVC0 841 aa17.62■□□□□ 0.41
PTPN11-207ENST00000639857 HTR3CQ8WXA8 447 aa17.62■□□□□ 0.41
PTPN11-207ENST00000639857 SCAMP4Q969E2 229 aa17.62■□□□□ 0.41
PTPN11-207ENST00000639857 COX14Q96I36 57 aa17.62■□□□□ 0.41
PTPN11-207ENST00000639857 SMIM14Q96QK8 99 aa17.62■□□□□ 0.41
PTPN11-207ENST00000639857 CCDC3Q9BQI4 270 aa17.62■□□□□ 0.41
PTPN11-207ENST00000639857 ZFYVE1Q9HBF4 777 aa17.62■□□□□ 0.41
PTPN11-207ENST00000639857 VPS18Q9P253 973 aa17.62■□□□□ 0.41
PTPN11-207ENST00000639857 FAM153AQ9UHL3 310 aa17.62■□□□□ 0.41
PTPN11-207ENST00000639857 CD84Q9UIB8 345 aa17.62■□□□□ 0.41
PTPN11-207ENST00000639857 MOSPD1Q9UJG1 213 aa17.62■□□□□ 0.41
PTPN11-207ENST00000639857 TRHDEQ9UKU6 1024 aa17.62■□□□□ 0.41
PTPN11-207ENST00000639857 SUFUQ9UMX1 484 aa17.62■□□□□ 0.41
PTPN11-207ENST00000639857 DUSP10Q9Y6W6 482 aa17.62■□□□□ 0.41
PTPN11-207ENST00000639857 PKD1L2Q7Z442 2459 aa17.61■□□□□ 0.41
PTPN11-207ENST00000639857 A0A0U1RQS6 177 aa17.61■□□□□ 0.41
PTPN11-207ENST00000639857 GRID2IPA4D2P6 1211 aa17.61■□□□□ 0.41
PTPN11-207ENST00000639857 CSO75390 466 aaKnown RBP17.61■□□□□ 0.41
PTPN11-207ENST00000639857 KRT37O76014 449 aa17.61■□□□□ 0.41
PTPN11-207ENST00000639857 GLB1P16278 677 aa17.61■□□□□ 0.41
PTPN11-207ENST00000639857 LRP8Q14114 963 aa17.61■□□□□ 0.41
PTPN11-207ENST00000639857 GALNT3Q14435 633 aa17.61■□□□□ 0.41
PTPN11-207ENST00000639857 ISXQ2M1V0 245 aa17.61■□□□□ 0.41
PTPN11-207ENST00000639857 C14orf28Q4W4Y0 310 aa17.61■□□□□ 0.41
PTPN11-207ENST00000639857 PDPK2PQ6A1A2 396 aa17.61■□□□□ 0.41
PTPN11-207ENST00000639857 RBM44Q6ZP01 1051 aaKnown RBP17.61■□□□□ 0.41
PTPN11-207ENST00000639857 RFLNAQ6ZTI6 216 aa17.61■□□□□ 0.41
PTPN11-207ENST00000639857 LYSMD3Q7Z3D4 306 aa17.61■□□□□ 0.41
PTPN11-207ENST00000639857 ZC3H18Q86VM9 953 aaKnown RBP17.61■□□□□ 0.41
PTPN11-207ENST00000639857 FAM46DQ8NEK8 389 aa17.61■□□□□ 0.41
PTPN11-207ENST00000639857 UBE2Q2Q8WVN8 375 aa17.61■□□□□ 0.41
PTPN11-207ENST00000639857 FCRL5Q96RD9 977 aa17.61■□□□□ 0.41
PTPN11-207ENST00000639857 RIOK2Q9BVS4 552 aaKnown RBP17.61■□□□□ 0.41
PTPN11-207ENST00000639857 OSBPL8Q9BZF1 889 aa17.61■□□□□ 0.41
PTPN11-207ENST00000639857 FAM83DQ9H4H8 585 aa17.61■□□□□ 0.41
PTPN11-207ENST00000639857 SIRPGQ9P1W8 387 aa17.61■□□□□ 0.41
PTPN11-207ENST00000639857 KLHL8Q9P2G9 620 aaPredicted RBP17.61■□□□□ 0.41
PTPN11-207ENST00000639857 GULP1Q9UBP9 304 aa17.61■□□□□ 0.41
PTPN11-207ENST00000639857 MIF4GDA9UHW6 222 aaKnown RBP17.6■□□□□ 0.41
PTPN11-207ENST00000639857 NTN3O00634 580 aaPredicted RBP17.6■□□□□ 0.41
PTPN11-207ENST00000639857 NUDT21O43809 227 aaKnown RBP17.6■□□□□ 0.41
PTPN11-207ENST00000639857 NOBOXO60393 691 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms