RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 TCRBV5S1A1TA0A578 114 aa14.95□□□□□ -0.02
SYNE2-228ENST00000639659 NPIPB15A6NHN6 443 aaPredicted RBP14.95□□□□□ -0.02
SYNE2-228ENST00000639659 ASMTLO95671 621 aa14.95□□□□□ -0.02
SYNE2-228ENST00000639659 TNFAIP3P21580 790 aa14.95□□□□□ -0.02
SYNE2-228ENST00000639659 LHCGRP22888 699 aa14.95□□□□□ -0.02
SYNE2-228ENST00000639659 NFKBIAP25963 317 aa14.95□□□□□ -0.02
SYNE2-228ENST00000639659 MAXP61244 160 aa14.95□□□□□ -0.02
SYNE2-228ENST00000639659 NSUN2Q08J23 767 aaKnown RBP eCLIP14.95□□□□□ -0.02
SYNE2-228ENST00000639659 NFATC2Q13469 925 aa14.95□□□□□ -0.02
SYNE2-228ENST00000639659 ERMARDQ5T6L9 678 aa14.95□□□□□ -0.02
SYNE2-228ENST00000639659 TMEM71Q6P5X7 295 aa14.95□□□□□ -0.02
SYNE2-228ENST00000639659 SLC37A2Q8TED4 501 aa14.95□□□□□ -0.02
SYNE2-228ENST00000639659 NCSTNQ92542 709 aa14.95□□□□□ -0.02
SYNE2-228ENST00000639659 SLC45A3Q96JT2 553 aa14.95□□□□□ -0.02
SYNE2-228ENST00000639659 PEBP4Q96S96 227 aa14.95□□□□□ -0.02
SYNE2-228ENST00000639659 NUP62CLQ9H1M0 184 aa14.95□□□□□ -0.02
SYNE2-228ENST00000639659 NBASA2RRP1 2371 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 B4E171 279 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 INPP4BO15327 924 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 PRPSAP2O60256 369 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 IVLP07476 585 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 CR2P20023 1033 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 NR1D1P20393 614 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 OAS2P29728 719 aaKnown RBP14.94□□□□□ -0.02
SYNE2-228ENST00000639659 TSPAN7P41732 249 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 GPLD1P80108 840 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 TRAF2Q12933 501 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 SEPT6Q14141 434 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 LACTB2Q53H82 288 aaPredicted RBP14.94□□□□□ -0.02
SYNE2-228ENST00000639659 PPP1R15BQ5SWA1 713 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 CEACAM20Q6UY09 585 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 RFLNAQ6ZTI6 216 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 USP45Q70EL2 814 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 GALNT13Q8IUC8 556 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 MCOLN2Q8IZK6 566 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.94□□□□□ -0.02
SYNE2-228ENST00000639659 STARD8Q92502 1023 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 AP2M1Q96CW1 435 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 RTP4Q96DX8 246 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 ABHD17AQ96GS6 310 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 PSKH2Q96QS6 385 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 DPYSL5Q9BPU6 564 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 NOD2Q9HC29 1040 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 APMAPQ9HDC9 416 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 TAS2R14Q9NYV8 317 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 PILRAQ9UKJ1 303 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 PHTF1Q9UMS5 762 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 SLC17A4Q9Y2C5 497 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 SIK3Q9Y2K2 1263 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 PRKAB1Q9Y478 270 aa14.94□□□□□ -0.02
SYNE2-228ENST00000639659 BLACEA4D250 179 aa14.93□□□□□ -0.02
SYNE2-228ENST00000639659 CAPN5O15484 640 aaPredicted RBP14.93□□□□□ -0.02
SYNE2-228ENST00000639659 SOCS5O75159 536 aa14.93□□□□□ -0.02
SYNE2-228ENST00000639659 RNF8O76064 485 aa14.93□□□□□ -0.02
SYNE2-228ENST00000639659 STK17BO94768 372 aa14.93□□□□□ -0.02
SYNE2-228ENST00000639659 TCN2P20062 427 aa14.93□□□□□ -0.02
SYNE2-228ENST00000639659 MAP4P27816 1152 aaKnown RBP14.93□□□□□ -0.02
SYNE2-228ENST00000639659 MAN1A1P33908 653 aa14.93□□□□□ -0.02
SYNE2-228ENST00000639659 HHEXQ03014 270 aa14.93□□□□□ -0.02
SYNE2-228ENST00000639659 ACAD10Q6JQN1 1059 aa14.93□□□□□ -0.02
SYNE2-228ENST00000639659 BBS5Q8N3I7 341 aa14.93□□□□□ -0.02
SYNE2-228ENST00000639659 PGBD5Q8N414 524 aa14.93□□□□□ -0.02
SYNE2-228ENST00000639659 NSMCE1Q8WV22 266 aa14.93□□□□□ -0.02
SYNE2-228ENST00000639659 APOBEC4Q8WW27 367 aaKnown RBP14.93□□□□□ -0.02
SYNE2-228ENST00000639659 TEFMQ96QE5 360 aaKnown RBP14.93□□□□□ -0.02
SYNE2-228ENST00000639659 SMIM14Q96QK8 99 aa14.93□□□□□ -0.02
SYNE2-228ENST00000639659 NUDCD1Q96RS6 583 aa14.93□□□□□ -0.02
SYNE2-228ENST00000639659 STN1Q9H668 368 aaKnown RBP14.93□□□□□ -0.02
SYNE2-228ENST00000639659 KCTD5Q9NXV2 234 aa14.93□□□□□ -0.02
SYNE2-228ENST00000639659 ZNHIT2Q9UHR6 403 aa14.93□□□□□ -0.02
SYNE2-228ENST00000639659 MAN2B2Q9Y2E5 1009 aa14.93□□□□□ -0.02
SYNE2-228ENST00000639659 MRPS18BQ9Y676 258 aaKnown RBP14.93□□□□□ -0.02
SYNE2-228ENST00000639659 LRRK2Q5S007 2527 aa14.92□□□□□ -0.02
SYNE2-228ENST00000639659 A0A1W2PQ67 120 aa14.92□□□□□ -0.02
SYNE2-228ENST00000639659 PRR19A6NJB7 356 aa14.92□□□□□ -0.02
SYNE2-228ENST00000639659 HTRA2O43464 458 aaPredicted RBP14.92□□□□□ -0.02
SYNE2-228ENST00000639659 SNX2O60749 519 aa14.92□□□□□ -0.02
SYNE2-228ENST00000639659 EML2O95834 649 aa14.92□□□□□ -0.02
SYNE2-228ENST00000639659 MIPP30301 263 aa14.92□□□□□ -0.02
SYNE2-228ENST00000639659 COPB1P53618 953 aaKnown RBP14.92□□□□□ -0.02
SYNE2-228ENST00000639659 UBXN1Q04323 297 aa14.92□□□□□ -0.02
SYNE2-228ENST00000639659 ITKQ08881 620 aa14.92□□□□□ -0.02
SYNE2-228ENST00000639659 ARMC12Q5T9G4 340 aa14.92□□□□□ -0.02
SYNE2-228ENST00000639659 LRRC66Q68CR7 880 aa14.92□□□□□ -0.02
SYNE2-228ENST00000639659 CHST15Q7LFX5 561 aaPredicted RBP14.92□□□□□ -0.02
SYNE2-228ENST00000639659 TIPARPQ7Z3E1 657 aaKnown RBP14.92□□□□□ -0.02
SYNE2-228ENST00000639659 FAM26EQ8N5C1 309 aa14.92□□□□□ -0.02
SYNE2-228ENST00000639659 ATPAF2Q8N5M1 289 aa14.92□□□□□ -0.02
SYNE2-228ENST00000639659 BMPERQ8N8U9 685 aa14.92□□□□□ -0.02
SYNE2-228ENST00000639659 SCAMP4Q969E2 229 aa14.92□□□□□ -0.02
SYNE2-228ENST00000639659 EFHD1Q9BUP0 239 aa14.92□□□□□ -0.02
SYNE2-228ENST00000639659 ZWILCHQ9H900 591 aa14.92□□□□□ -0.02
SYNE2-228ENST00000639659 PARVAQ9NVD7 372 aa14.92□□□□□ -0.02
SYNE2-228ENST00000639659 CWC15Q9P013 229 aaKnown RBP14.92□□□□□ -0.02
SYNE2-228ENST00000639659 KCNK6Q9Y257 313 aa14.92□□□□□ -0.02
SYNE2-228ENST00000639659 TP53TG5Q9Y2B4 290 aa14.92□□□□□ -0.02
SYNE2-228ENST00000639659 EIF3CLB5ME19 914 aaKnown RBP14.91□□□□□ -0.02
SYNE2-228ENST00000639659 H3BRJ5 948 aa14.91□□□□□ -0.02
SYNE2-228ENST00000639659 PSMD11O00231 422 aa14.91□□□□□ -0.02
SYNE2-228ENST00000639659 MTSS1O43312 755 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms