RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 CCND3P30281 292 aaPredicted RBP4.55□□□□□ -1.68
SCN1A-210ENST00000635776 SLC25A3Q00325 362 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 HIST2H2ACQ16777 129 aaPredicted RBP4.55□□□□□ -1.68
SCN1A-210ENST00000635776 HIST2H2AA3Q6FI13 130 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 SULT1C3Q6IMI6 304 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 DSG4Q86SJ6 1040 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 ANKLE1Q8NAG6 615 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 CD99L2Q8TCZ2 262 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 LENG8Q96PV6 779 aaPredicted RBP4.55□□□□□ -1.68
SCN1A-210ENST00000635776 ECSITQ9BQ95 431 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 RTP3Q9BQQ7 232 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 HGH1Q9BTY7 390 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 TMEM106CQ9BVX2 250 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 TDRD1Q9BXT4 1180 aaKnown RBP4.55□□□□□ -1.68
SCN1A-210ENST00000635776 NMUR1Q9HB89 426 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 CREBZFQ9NS37 354 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 RNF19AQ9NV58 838 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 SUCOQ9UBS9 1254 aaKnown RBP4.55□□□□□ -1.68
SCN1A-210ENST00000635776 TRIM17Q9Y577 477 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 ZFP37Q9Y6Q3 630 aaPredicted RBP4.55□□□□□ -1.68
SCN1A-210ENST00000635776 UGT1A9O60656 530 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 GSTM1P09488 218 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 ZNF30P17039 623 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 PPIBP23284 216 aaKnown RBP4.54□□□□□ -1.68
SCN1A-210ENST00000635776 GLDCP23378 1020 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 SUOXP51687 545 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 RPS6KA3P51812 740 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 GSTM4Q03013 218 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 KCNC3Q14003 757 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 DPY19L1Q2PZI1 675 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 PIK3R6Q5UE93 754 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 ALG1LQ6GMV1 187 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 SNX20Q7Z614 316 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 MILR1Q7Z6M3 343 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 DENND1CQ8IV53 801 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 TRPV1Q8NER1 839 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 AGR3Q8TD06 166 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 UBE2E3Q969T4 207 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 NCLNQ969V3 563 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 CYP2S1Q96SQ9 504 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 BDH2Q9BUT1 245 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 OSBPL11Q9BXB4 747 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 RNF208Q9H0X6 261 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 UGT1A7Q9HAW7 530 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 UGT1A10Q9HAW8 530 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 UGT1A8Q9HAW9 530 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 PIH1D1Q9NWS0 290 aaKnown RBP4.54□□□□□ -1.68
SCN1A-210ENST00000635776 OSER1Q9NX31 292 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 CAPN14A8MX76 684 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 GOT2P00505 430 aaKnown RBP4.54□□□□□ -1.68
SCN1A-210ENST00000635776 EPB42P16452 691 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 FDXRP22570 491 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 MC4RP32245 332 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 SYTL3Q4VX76 610 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 SIRPB2Q5JXA9 342 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 PPM1LQ5SGD2 360 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 UBAP2Q5T6F2 1119 aaKnown RBP4.54□□□□□ -1.68
SCN1A-210ENST00000635776 RAVER1Q8IY67 606 aaKnown RBP4.54□□□□□ -1.68
SCN1A-210ENST00000635776 CPXM2Q8N436 756 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 FIBCD1Q8N539 461 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 TBC1D19Q8N5T2 526 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 PCDH20Q8N6Y1 951 aaKnown RBP4.54□□□□□ -1.68
SCN1A-210ENST00000635776 HTATIP2Q9BUP3 242 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 ATXN3LQ9H3M9 355 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 CAB39LQ9H9S4 337 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 SNX6Q9UNH7 406 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 POMPQ9Y244 141 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 EVPLLA8MZ36 301 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 G3V2L1 256 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 GNGT2O14610 69 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 UQCRBP14927 111 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 SPAM1P38567 509 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 CLCQ05315 142 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 RINLQ6ZS11 566 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 GDPD5Q8WTR4 605 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 CATSPER2Q96P56 530 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 MEAF6Q9HAF1 191 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 ZFYVE1Q9HBF4 777 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 ZIM2Q9NZV7 527 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 AP4S1Q9Y587 144 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 CCDC160A6NGH7 325 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 FOXO6A8MYZ6 492 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 PQBP1O60828 265 aaKnown RBP4.54□□□□□ -1.68
SCN1A-210ENST00000635776 DEAF1O75398 565 aaPredicted RBP4.54□□□□□ -1.68
SCN1A-210ENST00000635776 KRT36O76013 467 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 FAM58BPP0C7Q3 252 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 T-ENOLP0DO92 83 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 EPHA3P29320 983 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 UBAP2LQ14157 1087 aaKnown RBP4.54□□□□□ -1.68
SCN1A-210ENST00000635776 ACSBG2Q5FVE4 666 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 IRAK1BP1Q5VVH5 260 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 LPCAT2Q7L5N7 544 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 LRRTM3Q86VH5 581 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 KIAA1958Q8N8K9 716 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 HIPK4Q8NE63 616 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 SPDL1Q96EA4 605 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 C19orf60Q96EN9 201 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 SLC29A3Q9BZD2 475 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 CORO2BQ9UQ03 480 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 E2F8A0AVK6 867 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms