RNA–Protein interactions for RNA: ENST00000626660.1

SQSTM1-216, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-216ENST00000626660 CPT1BQ92523 772 aa19.05■□□□□ 0.64
SQSTM1-216ENST00000626660 SCAMP4Q969E2 229 aa19.05■□□□□ 0.64
SQSTM1-216ENST00000626660 EID2BQ96D98 161 aa19.05■□□□□ 0.64
SQSTM1-216ENST00000626660 TRIM51Q9BSJ1 452 aa19.05■□□□□ 0.64
SQSTM1-216ENST00000626660 RIOK2Q9BVS4 552 aaKnown RBP19.05■□□□□ 0.64
SQSTM1-216ENST00000626660 GDF3Q9NR23 364 aa19.05■□□□□ 0.64
SQSTM1-216ENST00000626660 NFKBIL1Q9UBC1 381 aaPredicted RBP19.05■□□□□ 0.64
SQSTM1-216ENST00000626660 ARL5AQ9Y689 179 aa19.05■□□□□ 0.64
SQSTM1-216ENST00000626660 MYLKQ15746 1914 aa19.04■□□□□ 0.64
SQSTM1-216ENST00000626660 ESPNB1AK53 854 aa19.04■□□□□ 0.64
SQSTM1-216ENST00000626660 CACNB4O00305 520 aaPredicted RBP19.04■□□□□ 0.64
SQSTM1-216ENST00000626660 ZNF500O60304 480 aaPredicted RBP19.04■□□□□ 0.64
SQSTM1-216ENST00000626660 BPIP17213 487 aa19.04■□□□□ 0.64
SQSTM1-216ENST00000626660 ENGP17813 658 aa19.04■□□□□ 0.64
SQSTM1-216ENST00000626660 TEAD1P28347 426 aa19.04■□□□□ 0.64
SQSTM1-216ENST00000626660 GRIA1P42261 906 aa19.04■□□□□ 0.64
SQSTM1-216ENST00000626660 NXPH1P58417 271 aa19.04■□□□□ 0.64
SQSTM1-216ENST00000626660 PFN3P60673 137 aa19.04■□□□□ 0.64
SQSTM1-216ENST00000626660 PTK2BQ14289 1009 aa19.04■□□□□ 0.64
SQSTM1-216ENST00000626660 KIF19Q2TAC6 998 aa19.04■□□□□ 0.64
SQSTM1-216ENST00000626660 AASDHQ4L235 1098 aaPredicted RBP19.04■□□□□ 0.64
SQSTM1-216ENST00000626660 ALS2CLQ60I27 953 aa19.04■□□□□ 0.64
SQSTM1-216ENST00000626660 PLA2G15Q8NCC3 412 aa19.04■□□□□ 0.64
SQSTM1-216ENST00000626660 PLEKHG4BQ96PX9 1271 aa19.04■□□□□ 0.64
SQSTM1-216ENST00000626660 APOOQ9BUR5 198 aa19.04■□□□□ 0.64
SQSTM1-216ENST00000626660 GTPBP2Q9BX10 602 aaKnown RBP19.04■□□□□ 0.64
SQSTM1-216ENST00000626660 WDR26Q9H7D7 661 aa19.04■□□□□ 0.64
SQSTM1-216ENST00000626660 BPIFA1Q9NP55 256 aa19.04■□□□□ 0.64
SQSTM1-216ENST00000626660 PHPT1Q9NRX4 125 aaPredicted RBP19.04■□□□□ 0.64
SQSTM1-216ENST00000626660 BFARQ9NZS9 450 aa19.04■□□□□ 0.64
SQSTM1-216ENST00000626660 IL17CQ9P0M4 197 aa19.04■□□□□ 0.64
SQSTM1-216ENST00000626660 PCDH15Q96QU1 1955 aa19.04■□□□□ 0.64
SQSTM1-216ENST00000626660 CABIN1Q9Y6J0 2220 aa19.04■□□□□ 0.64
SQSTM1-216ENST00000626660 TCRBV7S3A2A0A539 114 aa19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 CTAGE15A4D2H0 777 aa19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 EFCAB8A8MWE9 144 aa19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 DNALI1O14645 258 aaPredicted RBP19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 NDC80O14777 642 aa19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 BUD23O43709 281 aaKnown RBP19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 CER1O95813 267 aa19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 CTAGE8P0CG41 777 aa19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 HTR1BP28222 390 aa19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 SPAM1P38567 509 aa19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 CTSKP43235 329 aa19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 NPY2RP49146 381 aa19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 SESN2P58004 480 aaPredicted RBP19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 MSLNQ13421 630 aaPredicted RBP19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 PDE1CQ14123 709 aaPredicted RBP19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 DNTTIP2Q5QJE6 756 aaKnown RBP19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 CERCAMQ5T4B2 595 aa19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 HENMT1Q5T8I9 393 aaKnown RBP19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 ANKRD22Q5VYY1 191 aa19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 IZUMO3Q5VZ72 239 aa19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 LRRC8BQ6P9F7 803 aa19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 CTAGE6Q86UF2 777 aa19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 CTAGE4Q8IX94 777 aa19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 GPR26Q8NDV2 337 aa19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 MCUQ8NE86 351 aa19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 ZSCAN5AQ9BUG6 496 aa19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 SPATA16Q9BXB7 569 aa19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 XAB2Q9HCS7 855 aaKnown RBP19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 FSCN3Q9NQT6 498 aa19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 FNDC3AQ9Y2H6 1198 aaKnown RBP19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 OR1A2Q9Y585 309 aa19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 SNX11Q9Y5W9 270 aa19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 MYO15AQ9UKN7 3530 aa19.03■□□□□ 0.64
SQSTM1-216ENST00000626660 LNP1A1A4G5 178 aa19.02■□□□□ 0.64
SQSTM1-216ENST00000626660 HEATR9A2RTY3 570 aa19.02■□□□□ 0.64
SQSTM1-216ENST00000626660 K7ESM1 405 aa19.02■□□□□ 0.64
SQSTM1-216ENST00000626660 RAD51CO43502 376 aa19.02■□□□□ 0.64
SQSTM1-216ENST00000626660 DFNA5O60443 496 aa19.02■□□□□ 0.64
SQSTM1-216ENST00000626660 TGM1P22735 817 aa19.02■□□□□ 0.64
SQSTM1-216ENST00000626660 KELP23276 732 aa19.02■□□□□ 0.64
SQSTM1-216ENST00000626660 ADRA1DP25100 572 aa19.02■□□□□ 0.64
SQSTM1-216ENST00000626660 TRIM23P36406 574 aa19.02■□□□□ 0.64
SQSTM1-216ENST00000626660 HADHAP40939 763 aa19.02■□□□□ 0.64
SQSTM1-216ENST00000626660 KIAA1024LP59773 190 aa19.02■□□□□ 0.64
SQSTM1-216ENST00000626660 BNC1Q01954 994 aa19.02■□□□□ 0.64
SQSTM1-216ENST00000626660 RNASEH2BQ5TBB1 312 aaKnown RBP19.02■□□□□ 0.64
SQSTM1-216ENST00000626660 ADAMTSL4Q6UY14 1074 aa19.02■□□□□ 0.64
SQSTM1-216ENST00000626660 KDM7AQ6ZMT4 941 aa19.02■□□□□ 0.64
SQSTM1-216ENST00000626660 OXR1Q8N573 874 aa19.02■□□□□ 0.64
SQSTM1-216ENST00000626660 CEP112Q8N8E3 955 aa19.02■□□□□ 0.64
SQSTM1-216ENST00000626660 PPHLN1Q8NEY8 458 aaKnown RBP19.02■□□□□ 0.64
SQSTM1-216ENST00000626660 OR4K2Q8NGD2 314 aa19.02■□□□□ 0.64
SQSTM1-216ENST00000626660 SNF8Q96H20 258 aa19.02■□□□□ 0.64
SQSTM1-216ENST00000626660 C19orf43Q9BQ61 176 aa19.02■□□□□ 0.64
SQSTM1-216ENST00000626660 EDEM2Q9BV94 578 aa19.02■□□□□ 0.64
SQSTM1-216ENST00000626660 TRIM31Q9BZY9 425 aa19.02■□□□□ 0.64
SQSTM1-216ENST00000626660 IL22Q9GZX6 179 aa19.02■□□□□ 0.64
SQSTM1-216ENST00000626660 GPR27Q9NS67 375 aa19.02■□□□□ 0.64
SQSTM1-216ENST00000626660 KCTD3Q9Y597 815 aa19.02■□□□□ 0.64
SQSTM1-216ENST00000626660 TMEM131Q92545 1883 aa19.02■□□□□ 0.64
SQSTM1-216ENST00000626660 WDR87Q6ZQQ6 2873 aa19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 SPTY2D1-AS1A0A0U1RR47 76 aa19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 GOLGA8MH3BSY2 632 aa19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 SMAPO00193 183 aa19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 LDB2O43679 373 aa19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 TMEM63AO94886 807 aa19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 HOXC4P09017 264 aaPredicted RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms