RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 FAM96AQ9H5X1 160 aa16.56■□□□□ 0.24
CCNA1-203ENST00000625767 PREBQ9HCU5 417 aa16.56■□□□□ 0.24
CCNA1-203ENST00000625767 SLCO1B1Q9Y6L6 691 aa16.56■□□□□ 0.24
CCNA1-203ENST00000625767 TM7SF2O76062 418 aa16.55■□□□□ 0.24
CCNA1-203ENST00000625767 GOT2P00505 430 aaKnown RBP16.55■□□□□ 0.24
CCNA1-203ENST00000625767 POLBP06746 335 aa16.55■□□□□ 0.24
CCNA1-203ENST00000625767 ERVK-10P10266 1014 aa16.55■□□□□ 0.24
CCNA1-203ENST00000625767 MCM3P25205 808 aa16.55■□□□□ 0.24
CCNA1-203ENST00000625767 NFKBIAP25963 317 aa16.55■□□□□ 0.24
CCNA1-203ENST00000625767 ARCN1P48444 511 aaKnown RBP16.55■□□□□ 0.24
CCNA1-203ENST00000625767 CCDC15Q0P6D6 951 aa16.55■□□□□ 0.24
CCNA1-203ENST00000625767 C3orf62Q6ZUJ4 267 aa16.55■□□□□ 0.24
CCNA1-203ENST00000625767 HORMAD1Q86X24 394 aa16.55■□□□□ 0.24
CCNA1-203ENST00000625767 PALM2Q8IXS6 379 aa16.55■□□□□ 0.24
CCNA1-203ENST00000625767 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.55■□□□□ 0.24
CCNA1-203ENST00000625767 PLA2G15Q8NCC3 412 aa16.55■□□□□ 0.24
CCNA1-203ENST00000625767 ZBTB9Q96C00 473 aa16.55■□□□□ 0.24
CCNA1-203ENST00000625767 SRPK1Q96SB4 655 aaKnown RBP16.55■□□□□ 0.24
CCNA1-203ENST00000625767 RIOK2Q9BVS4 552 aaKnown RBP16.55■□□□□ 0.24
CCNA1-203ENST00000625767 VPS37BQ9H9H4 285 aa16.55■□□□□ 0.24
CCNA1-203ENST00000625767 MBNL1Q9NR56 388 aaKnown RBP16.55■□□□□ 0.24
CCNA1-203ENST00000625767 SMYD2Q9NRG4 433 aa16.55■□□□□ 0.24
CCNA1-203ENST00000625767 MARCH4Q9P2E8 410 aaPredicted RBP16.55■□□□□ 0.24
CCNA1-203ENST00000625767 CA5BQ9Y2D0 317 aa16.55■□□□□ 0.24
CCNA1-203ENST00000625767 FAM169AQ9Y6X4 670 aa16.55■□□□□ 0.24
CCNA1-203ENST00000625767 MAGEB16A2A368 324 aa16.54■□□□□ 0.24
CCNA1-203ENST00000625767 LRRC72A6NJI9 287 aa16.54■□□□□ 0.24
CCNA1-203ENST00000625767 WNT9AO14904 365 aa16.54■□□□□ 0.24
CCNA1-203ENST00000625767 SLC31A1O15431 190 aa16.54■□□□□ 0.24
CCNA1-203ENST00000625767 UGT1A9O60656 530 aa16.54■□□□□ 0.24
CCNA1-203ENST00000625767 RPP40O75818 363 aaKnown RBP16.54■□□□□ 0.24
CCNA1-203ENST00000625767 FSBPO95073 299 aa16.54■□□□□ 0.24
CCNA1-203ENST00000625767 SLC34A2O95436 690 aa16.54■□□□□ 0.24
CCNA1-203ENST00000625767 C1QAP02745 245 aa16.54■□□□□ 0.24
CCNA1-203ENST00000625767 UGT1A6P19224 532 aa16.54■□□□□ 0.24
CCNA1-203ENST00000625767 UGT1A1P22309 533 aa16.54■□□□□ 0.24
CCNA1-203ENST00000625767 UGT1A4P22310 534 aa16.54■□□□□ 0.24
CCNA1-203ENST00000625767 PSMA3P25788 255 aa16.54■□□□□ 0.24
CCNA1-203ENST00000625767 HOXA6P31267 233 aa16.54■□□□□ 0.24
CCNA1-203ENST00000625767 MC4RP32245 332 aa16.54■□□□□ 0.24
CCNA1-203ENST00000625767 UGT1A3P35503 534 aa16.54■□□□□ 0.24
CCNA1-203ENST00000625767 UGT1A5P35504 534 aa16.54■□□□□ 0.24
CCNA1-203ENST00000625767 RPS21P63220 83 aaKnown RBP16.54■□□□□ 0.24
CCNA1-203ENST00000625767 SFSWAPQ12872 951 aaKnown RBP16.54■□□□□ 0.24
CCNA1-203ENST00000625767 SEMA3AQ14563 771 aa16.54■□□□□ 0.24
CCNA1-203ENST00000625767 SLMAPQ14BN4 828 aa16.54■□□□□ 0.24
CCNA1-203ENST00000625767 EFTUD2Q15029 972 aaKnown RBP eCLIP16.54■□□□□ 0.24
CCNA1-203ENST00000625767 SKIDA1Q1XH10 827 aa16.54■□□□□ 0.24
CCNA1-203ENST00000625767 WSCD2Q2TBF2 565 aa16.54■□□□□ 0.24
CCNA1-203ENST00000625767 KIAA1161Q6NSJ0 714 aa16.54■□□□□ 0.24
CCNA1-203ENST00000625767 FBXO38Q6PIJ6 1188 aa16.54■□□□□ 0.24
CCNA1-203ENST00000625767 PTAR1Q7Z6K3 402 aaPredicted RBP16.54■□□□□ 0.24
CCNA1-203ENST00000625767 LDB1Q86U70 411 aaPredicted RBP16.54■□□□□ 0.24
CCNA1-203ENST00000625767 OR6P1Q8NGX9 317 aa16.54■□□□□ 0.24
CCNA1-203ENST00000625767 CAVIN3Q969G5 261 aa16.54■□□□□ 0.24
CCNA1-203ENST00000625767 NUS1Q96E22 293 aa16.54■□□□□ 0.24
CCNA1-203ENST00000625767 CCDC97Q96F63 343 aaPredicted RBP16.54■□□□□ 0.24
CCNA1-203ENST00000625767 SLC17A9Q9BYT1 436 aa16.54■□□□□ 0.24
CCNA1-203ENST00000625767 UGT1A7Q9HAW7 530 aa16.54■□□□□ 0.24
CCNA1-203ENST00000625767 UGT1A10Q9HAW8 530 aa16.54■□□□□ 0.24
CCNA1-203ENST00000625767 UGT1A8Q9HAW9 530 aa16.54■□□□□ 0.24
CCNA1-203ENST00000625767 PKD2L2Q9NZM6 624 aa16.54■□□□□ 0.24
CCNA1-203ENST00000625767 TCRBV9S1A1TA0A576 114 aa16.53■□□□□ 0.24
CCNA1-203ENST00000625767 FADS2P1A8MWK0 482 aa16.53■□□□□ 0.24
CCNA1-203ENST00000625767 CXorf49A8MYA2 514 aaPredicted RBP16.53■□□□□ 0.24
CCNA1-203ENST00000625767 PSMD11O00231 422 aa16.53■□□□□ 0.24
CCNA1-203ENST00000625767 RIPK2O43353 540 aa16.53■□□□□ 0.24
CCNA1-203ENST00000625767 TTC4O95801 387 aa16.53■□□□□ 0.24
CCNA1-203ENST00000625767 SOD1P00441 154 aa16.53■□□□□ 0.24
CCNA1-203ENST00000625767 OXTRP30559 389 aa16.53■□□□□ 0.24
CCNA1-203ENST00000625767 SPAM1P38567 509 aa16.53■□□□□ 0.24
CCNA1-203ENST00000625767 PRAMEP78395 509 aa16.53■□□□□ 0.24
CCNA1-203ENST00000625767 PDE1BQ01064 536 aa16.53■□□□□ 0.24
CCNA1-203ENST00000625767 RPL6Q02878 288 aaKnown RBP16.53■□□□□ 0.24
CCNA1-203ENST00000625767 CREB5Q02930 508 aa16.53■□□□□ 0.24
CCNA1-203ENST00000625767 ANGPT1Q15389 498 aa16.53■□□□□ 0.24
CCNA1-203ENST00000625767 CHRNA6Q15825 494 aa16.53■□□□□ 0.24
CCNA1-203ENST00000625767 USP39Q53GS9 565 aaKnown RBP16.53■□□□□ 0.24
CCNA1-203ENST00000625767 HSP90AA5PQ58FG0 334 aa16.53■□□□□ 0.24
CCNA1-203ENST00000625767 SPANXN3Q5MJ09 141 aa16.53■□□□□ 0.24
CCNA1-203ENST00000625767 HENMT1Q5T8I9 393 aaKnown RBP16.53■□□□□ 0.24
CCNA1-203ENST00000625767 KIAA0930Q6ICG6 404 aaPredicted RBP16.53■□□□□ 0.24
CCNA1-203ENST00000625767 PSAPL1Q6NUJ1 521 aa16.53■□□□□ 0.24
CCNA1-203ENST00000625767 EMBQ6PCB8 327 aa16.53■□□□□ 0.24
CCNA1-203ENST00000625767 WDR5BQ86VZ2 330 aa16.53■□□□□ 0.24
CCNA1-203ENST00000625767 SLC41A1Q8IVJ1 513 aa16.53■□□□□ 0.24
CCNA1-203ENST00000625767 PIANPQ8IYJ0 282 aa16.53■□□□□ 0.24
CCNA1-203ENST00000625767 GSDMBQ8TAX9 411 aa16.53■□□□□ 0.24
CCNA1-203ENST00000625767 FBF1Q8TES7 1133 aa16.53■□□□□ 0.24
CCNA1-203ENST00000625767 NAT14Q8WUY8 206 aa16.53■□□□□ 0.24
CCNA1-203ENST00000625767 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.53■□□□□ 0.24
CCNA1-203ENST00000625767 BIRC7Q96CA5 298 aa16.53■□□□□ 0.24
CCNA1-203ENST00000625767 AP2M1Q96CW1 435 aa16.53■□□□□ 0.24
CCNA1-203ENST00000625767 NAT9Q9BTE0 207 aa16.53■□□□□ 0.24
CCNA1-203ENST00000625767 C1QTNF2Q9BXJ5 285 aa16.53■□□□□ 0.24
CCNA1-203ENST00000625767 TSPYL1Q9H0U9 437 aa16.53■□□□□ 0.24
CCNA1-203ENST00000625767 KDM4CQ9H3R0 1056 aa16.53■□□□□ 0.24
CCNA1-203ENST00000625767 C20orf96Q9NUD7 363 aaPredicted RBP16.53■□□□□ 0.24
CCNA1-203ENST00000625767 TMPRSS11EQ9UL52 423 aa16.53■□□□□ 0.24
CCNA1-203ENST00000625767 RIMKLBQ9ULI2 386 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms