RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 FLOT2Q14254 428 aa17.46■□□□□ 0.39
FAM3A-222ENST00000621967 FAM83EQ2M2I3 478 aa17.46■□□□□ 0.39
FAM3A-222ENST00000621967 PABPC1LQ4VXU2 614 aaKnown RBP17.46■□□□□ 0.39
FAM3A-222ENST00000621967 ZNF789Q5FWF6 425 aa17.46■□□□□ 0.39
FAM3A-222ENST00000621967 NAIF1Q69YI7 327 aaPredicted RBP17.46■□□□□ 0.39
FAM3A-222ENST00000621967 TMC8Q8IU68 726 aa17.46■□□□□ 0.39
FAM3A-222ENST00000621967 HS6ST3Q8IZP7 471 aa17.46■□□□□ 0.39
FAM3A-222ENST00000621967 LEMD2Q8NC56 503 aa17.46■□□□□ 0.39
FAM3A-222ENST00000621967 FAR2Q96K12 515 aa17.46■□□□□ 0.39
FAM3A-222ENST00000621967 MARK4Q96L34 752 aa17.46■□□□□ 0.39
FAM3A-222ENST00000621967 GBP5Q96PP8 586 aa17.46■□□□□ 0.39
FAM3A-222ENST00000621967 APOL5Q9BWW9 433 aa17.46■□□□□ 0.39
FAM3A-222ENST00000621967 UNKQ9C0B0 810 aaKnown RBP17.46■□□□□ 0.39
FAM3A-222ENST00000621967 VPS45Q9NRW7 570 aa17.46■□□□□ 0.39
FAM3A-222ENST00000621967 MRGBPQ9NV56 204 aa17.46■□□□□ 0.39
FAM3A-222ENST00000621967 NEMP2A6NFY4 417 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 WISP3O95389 354 aaPredicted RBP17.45■□□□□ 0.38
FAM3A-222ENST00000621967 MOCS2O96007 188 aaPredicted RBP17.45■□□□□ 0.38
FAM3A-222ENST00000621967 GALNT1Q10472 559 aaPredicted RBP17.45■□□□□ 0.38
FAM3A-222ENST00000621967 CSHL1Q14406 222 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 AGAP9Q5VTM2 703 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 GRASPQ7Z6J2 395 aaPredicted RBP17.45■□□□□ 0.38
FAM3A-222ENST00000621967 OR13J1Q8NGT2 312 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 GABPB2Q8TAK5 448 aaPredicted RBP17.45■□□□□ 0.38
FAM3A-222ENST00000621967 DLG3Q92796 817 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 UBXN10Q96LJ8 280 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 GUCD1Q96NT3 240 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 UTP6Q9NYH9 597 aaKnown RBP17.45■□□□□ 0.38
FAM3A-222ENST00000621967 DNMT3BQ9UBC3 853 aaKnown RBP17.45■□□□□ 0.38
FAM3A-222ENST00000621967 RIMS3Q9UJD0 308 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 NUDT5Q9UKK9 219 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 TLR6Q9Y2C9 796 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 DTNAQ9Y4J8 743 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 A8MT66 165 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 AP1G1O43747 822 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 BCAS2O75934 225 aaPredicted RBP17.45■□□□□ 0.38
FAM3A-222ENST00000621967 IPO13O94829 963 aaKnown RBP17.45■□□□□ 0.38
FAM3A-222ENST00000621967 FGF19O95750 216 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 RHOP08100 348 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 LTA4HP09960 611 aaKnown RBP17.45■□□□□ 0.38
FAM3A-222ENST00000621967 ENO3P13929 434 aaPredicted RBP17.45■□□□□ 0.38
FAM3A-222ENST00000621967 KCNA5P22460 613 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 ME2P23368 584 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 PSMD8P48556 350 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 SERPINH1P50454 418 aaKnown RBP17.45■□□□□ 0.38
FAM3A-222ENST00000621967 RENBPP51606 427 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 MS4A2Q01362 244 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 TNK2Q07912 1038 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 PCSK7Q16549 785 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 MMEL1Q495T6 779 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 SLC30A9Q6PML9 568 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 KDELC2Q7Z4H8 507 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 TICAM1Q8IUC6 712 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 ST13P4Q8IZP2 240 aaPredicted RBP17.45■□□□□ 0.38
FAM3A-222ENST00000621967 GALNT15Q8N3T1 639 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 ICA1LQ8NDH6 482 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 PABPC5Q96DU9 382 aaKnown RBP17.45■□□□□ 0.38
FAM3A-222ENST00000621967 SGF29Q96ES7 293 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 TSPAN17Q96FV3 270 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 MEAF6Q9HAF1 191 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 IL21Q9HBE4 155 aa17.45■□□□□ 0.38
FAM3A-222ENST00000621967 PAPOLBQ9NRJ5 636 aaKnown RBP17.45■□□□□ 0.38
FAM3A-222ENST00000621967 ZNF840PA6NDX5 716 aa17.44■□□□□ 0.38
FAM3A-222ENST00000621967 ACOT8O14734 319 aa17.44■□□□□ 0.38
FAM3A-222ENST00000621967 CAPNS1P04632 268 aa17.44■□□□□ 0.38
FAM3A-222ENST00000621967 MMP2P08253 660 aa17.44■□□□□ 0.38
FAM3A-222ENST00000621967 ZDHHC11BP0C7U3 371 aa17.44■□□□□ 0.38
FAM3A-222ENST00000621967 RHOQP17081 205 aa17.44■□□□□ 0.38
FAM3A-222ENST00000621967 PKNOX1P55347 436 aa17.44■□□□□ 0.38
FAM3A-222ENST00000621967 ART3Q13508 389 aa17.44■□□□□ 0.38
FAM3A-222ENST00000621967 GRAMD1BQ3KR37 738 aa17.44■□□□□ 0.38
FAM3A-222ENST00000621967 FBXL19Q6PCT2 694 aa17.44■□□□□ 0.38
FAM3A-222ENST00000621967 CILP2Q8IUL8 1156 aa17.44■□□□□ 0.38
FAM3A-222ENST00000621967 SPDYE1Q8NFV5 336 aaPredicted RBP17.44■□□□□ 0.38
FAM3A-222ENST00000621967 HMGCLL1Q8TB92 370 aa17.44■□□□□ 0.38
FAM3A-222ENST00000621967 PIP4K2CQ8TBX8 421 aa17.44■□□□□ 0.38
FAM3A-222ENST00000621967 MRPS31Q92665 395 aaKnown RBP17.44■□□□□ 0.38
FAM3A-222ENST00000621967 DCUN1D1Q96GG9 259 aa17.44■□□□□ 0.38
FAM3A-222ENST00000621967 NDNQ99608 321 aa17.44■□□□□ 0.38
FAM3A-222ENST00000621967 LRRC3Q9BY71 257 aa17.44■□□□□ 0.38
FAM3A-222ENST00000621967 NACA2Q9H009 215 aa17.44■□□□□ 0.38
FAM3A-222ENST00000621967 SUDS3Q9H7L9 328 aaPredicted RBP17.44■□□□□ 0.38
FAM3A-222ENST00000621967 TMEM248Q9NWD8 314 aa17.44■□□□□ 0.38
FAM3A-222ENST00000621967 GTSE1Q9NYZ3 720 aa17.44■□□□□ 0.38
FAM3A-222ENST00000621967 CLEC1BQ9P126 229 aa17.44■□□□□ 0.38
FAM3A-222ENST00000621967 PRSS51A0A1B0GVH4 220 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 A0A1W2PRU2 124 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 MROH6A6NGR9 719 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 SLC7A4O43246 635 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 DENRO43583 198 aaKnown RBP17.43■□□□□ 0.38
FAM3A-222ENST00000621967 TLR5O60602 858 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 F11P03951 625 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 RBP1P09455 135 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 SLC2A3P11169 496 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 HNRNPLP14866 589 aaKnown RBP eCLIP17.43■□□□□ 0.38
FAM3A-222ENST00000621967 EPHA5P54756 1037 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 INHBCP55103 352 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 MRPS22P82650 360 aaKnown RBP17.43■□□□□ 0.38
FAM3A-222ENST00000621967 FOLH1Q04609 750 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 ACAP2Q15057 778 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms