RNA–Protein interactions for RNA: ENST00000620463.1

COL1A2-213, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL1A2, Length 4,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-213ENST00000620463 TFAP2AP05549 437 aa13.12□□□□□ -0.31
COL1A2-213ENST00000620463 HMBSP08397 361 aa13.12□□□□□ -0.31
COL1A2-213ENST00000620463 ACO1P21399 889 aaKnown RBP13.12□□□□□ -0.31
COL1A2-213ENST00000620463 GTF2E2P29084 291 aaKnown RBP13.12□□□□□ -0.31
COL1A2-213ENST00000620463 BCAT1P54687 386 aa13.12□□□□□ -0.31
COL1A2-213ENST00000620463 RNASE12Q5GAN4 147 aaKnown RBP13.12□□□□□ -0.31
COL1A2-213ENST00000620463 DRICH1Q6PGQ1 229 aaPredicted RBP13.12□□□□□ -0.31
COL1A2-213ENST00000620463 GLIS1Q8NBF1 620 aa13.12□□□□□ -0.31
COL1A2-213ENST00000620463 STON2Q8WXE9 905 aa13.12□□□□□ -0.31
COL1A2-213ENST00000620463 MNTQ99583 582 aa13.12□□□□□ -0.31
COL1A2-213ENST00000620463 C2orf81A6NN90 581 aa13.12□□□□□ -0.31
COL1A2-213ENST00000620463 CHURC1-FNTBB4DL54 471 aa13.12□□□□□ -0.31
COL1A2-213ENST00000620463 H7C2Y5 167 aa13.12□□□□□ -0.31
COL1A2-213ENST00000620463 TXNP10599 105 aaKnown RBP13.12□□□□□ -0.31
COL1A2-213ENST00000620463 MMP8P22894 467 aa13.12□□□□□ -0.31
COL1A2-213ENST00000620463 NDST2P52849 883 aa13.12□□□□□ -0.31
COL1A2-213ENST00000620463 CNTN1Q12860 1018 aa13.12□□□□□ -0.31
COL1A2-213ENST00000620463 PCID2Q5JVF3 399 aa13.12□□□□□ -0.31
COL1A2-213ENST00000620463 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.12□□□□□ -0.31
COL1A2-213ENST00000620463 STYK1Q6J9G0 422 aa13.12□□□□□ -0.31
COL1A2-213ENST00000620463 PTCHD4Q6ZW05 846 aa13.12□□□□□ -0.31
COL1A2-213ENST00000620463 DEFB132Q7Z7B7 95 aa13.12□□□□□ -0.31
COL1A2-213ENST00000620463 GOLM1Q8NBJ4 401 aa13.12□□□□□ -0.31
COL1A2-213ENST00000620463 ZBTB45Q96K62 511 aaPredicted RBP13.12□□□□□ -0.31
COL1A2-213ENST00000620463 CDK5RAP1Q96SZ6 601 aaKnown RBP13.12□□□□□ -0.31
COL1A2-213ENST00000620463 CCDC106Q9BWC9 280 aa13.12□□□□□ -0.31
COL1A2-213ENST00000620463 MCUBQ9NWR8 336 aa13.12□□□□□ -0.31
COL1A2-213ENST00000620463 MKLN1Q9UL63 735 aa13.12□□□□□ -0.31
COL1A2-213ENST00000620463 APOL3O95236 402 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 FOSL2P15408 326 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 RPS3P23396 243 aaKnown RBP eCLIP13.11□□□□□ -0.31
COL1A2-213ENST00000620463 DCDC1P59894 354 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 TMEM62Q0P6H9 643 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 TIGD6Q17RP2 521 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 R3HCC1LQ7Z5L2 792 aaKnown RBP13.11□□□□□ -0.31
COL1A2-213ENST00000620463 LINC00116Q8NCU8 138 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 STAG3L4Q8TBR4 150 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 PIH1D2Q8WWB5 315 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 GMCL1Q96IK5 515 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 TBL1YQ9BQ87 522 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 MYCLP1P12525 358 aaPredicted RBP13.11□□□□□ -0.31
COL1A2-213ENST00000620463 TCF4P15884 667 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 CYP3A5P20815 502 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 NDST1P52848 882 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 PTPN5P54829 565 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 RPL38P63173 70 aaKnown RBP13.11□□□□□ -0.31
COL1A2-213ENST00000620463 PSMD5Q16401 504 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 USP39Q53GS9 565 aaKnown RBP13.11□□□□□ -0.31
COL1A2-213ENST00000620463 ZYG11AQ6WRX3 759 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 IGFN1Q86VF2 1251 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 GPR65Q8IYL9 337 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 ABI1Q8IZP0 508 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 FIBCD1Q8N539 461 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 FRMD6Q96NE9 622 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 CYP3A43Q9HB55 503 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 KLQ9UEF7 1012 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 MDM4O15151 490 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 AXIN1O15169 862 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 CSF2P04141 144 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 SLC2A3P11169 496 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 IER5Q5VY09 327 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 BTN2A1Q7KYR7 527 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 NETO2Q8NC67 525 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 TRPV3Q8NET8 790 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 FBXO27Q8NI29 283 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 DENND1AQ8TEH3 1009 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 JPH3Q8WXH2 748 aaPredicted RBP13.11□□□□□ -0.31
COL1A2-213ENST00000620463 IRGQQ8WZA9 623 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 FCGR1BQ92637 280 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 ERMAPQ96PL5 475 aaPredicted RBP13.11□□□□□ -0.31
COL1A2-213ENST00000620463 CRLS1Q9UJA2 301 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 IFT52Q9Y366 437 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 ARHGEF33A8MVX0 844 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 OR2B3O76000 313 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 SERPIND1P05546 499 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 MZF1P28698 734 aaPredicted RBP13.11□□□□□ -0.31
COL1A2-213ENST00000620463 KLF1Q13351 362 aaPredicted RBP13.11□□□□□ -0.31
COL1A2-213ENST00000620463 SPOUT1Q5T280 376 aaKnown RBP13.11□□□□□ -0.31
COL1A2-213ENST00000620463 CCDC185Q8N715 623 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 TTC29Q8NA56 475 aaPredicted RBP13.11□□□□□ -0.31
COL1A2-213ENST00000620463 TAAR1Q96RJ0 339 aa13.11□□□□□ -0.31
COL1A2-213ENST00000620463 TRIT1Q9H3H1 467 aaKnown RBP13.11□□□□□ -0.31
COL1A2-213ENST00000620463 POLR3BQ9NW08 1133 aaPredicted RBP13.11□□□□□ -0.31
COL1A2-213ENST00000620463 NOCTQ9UK39 431 aaKnown RBP13.11□□□□□ -0.31
COL1A2-213ENST00000620463 SHPRHQ149N8 1683 aa13.1□□□□□ -0.31
COL1A2-213ENST00000620463 IPO13O94829 963 aaKnown RBP13.1□□□□□ -0.31
COL1A2-213ENST00000620463 INMTO95050 263 aa13.1□□□□□ -0.31
COL1A2-213ENST00000620463 METTL18O95568 372 aa13.1□□□□□ -0.31
COL1A2-213ENST00000620463 F9P00740 461 aa13.1□□□□□ -0.31
COL1A2-213ENST00000620463 RCVRNP35243 200 aa13.1□□□□□ -0.31
COL1A2-213ENST00000620463 HNRNPFP52597 415 aaKnown RBP13.1□□□□□ -0.31
COL1A2-213ENST00000620463 LIMK2P53671 638 aa13.1□□□□□ -0.31
COL1A2-213ENST00000620463 SLC6A3Q01959 620 aa13.1□□□□□ -0.31
COL1A2-213ENST00000620463 PPP1R8Q12972 351 aaKnown RBP13.1□□□□□ -0.31
COL1A2-213ENST00000620463 APOBEC3FQ8IUX4 373 aaKnown RBP13.1□□□□□ -0.31
COL1A2-213ENST00000620463 MICALL2Q8IY33 904 aa13.1□□□□□ -0.31
COL1A2-213ENST00000620463 ZC3H10Q96K80 434 aaKnown RBP13.1□□□□□ -0.31
COL1A2-213ENST00000620463 SOX17Q9H6I2 414 aaPredicted RBP13.1□□□□□ -0.31
COL1A2-213ENST00000620463 PRMT7Q9NVM4 692 aaPredicted RBP13.1□□□□□ -0.31
COL1A2-213ENST00000620463 CUEDC1Q9NWM3 386 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms