RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 H3BMQ9 156 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 NOBOXO60393 691 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 F9P00740 461 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 IL7RP16871 459 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 NFKBIAP25963 317 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 LIPEQ05469 1076 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 ITGADQ13349 1161 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 PPP4R4Q6NUP7 873 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 UGT3A1Q6NUS8 523 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 DHRSXQ8N5I4 330 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 ITCHQ96J02 903 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 COG8Q96MW5 612 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 MUS81Q96NY9 551 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 PRRC2BQ5JSZ5 2229 aaKnown RBP20.36■□□□□ 0.85
SSBP3-216ENST00000610401 E9PAM4 449 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 AZIN1O14977 448 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 CLASP2O75122 1294 aaKnown RBP20.36■□□□□ 0.85
SSBP3-216ENST00000610401 IMPDH1P20839 514 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 ALDH4A1P30038 563 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 ADSLP30566 484 aaPredicted RBP20.36■□□□□ 0.85
SSBP3-216ENST00000610401 CDKN1CP49918 316 aaPredicted RBP20.36■□□□□ 0.85
SSBP3-216ENST00000610401 TNK2Q07912 1038 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 SEMA3AQ14563 771 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 MFSD10Q14728 455 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 RBBP7Q16576 425 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 DUSP28Q4G0W2 176 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 BNIPLQ7Z465 357 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 SLC10A4Q96EP9 437 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 AGO3Q9H9G7 860 aaKnown RBP20.36■□□□□ 0.85
SSBP3-216ENST00000610401 FANCEQ9HB96 536 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 POLG2Q9UHN1 485 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 ZFC3H1O60293 1989 aaKnown RBP20.36■□□□□ 0.85
SSBP3-216ENST00000610401 ZBBXA8MT70 800 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 CCNCP24863 283 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 GSK3BP49841 420 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 TSNQ15631 228 aaKnown RBP20.36■□□□□ 0.85
SSBP3-216ENST00000610401 PSMD5Q16401 504 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 LYSMD3Q7Z3D4 306 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 ZNF554Q86TJ5 538 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 STK32CQ86UX6 486 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 CLYBLQ8N0X4 340 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 CFAP52Q8N1V2 620 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 NPLQ9BXD5 320 aaPredicted RBP20.36■□□□□ 0.85
SSBP3-216ENST00000610401 ALG2Q9H553 416 aa20.36■□□□□ 0.85
SSBP3-216ENST00000610401 CDC7O00311 574 aa20.35■□□□□ 0.85
SSBP3-216ENST00000610401 ZSCAN9O15535 394 aaPredicted RBP20.35■□□□□ 0.85
SSBP3-216ENST00000610401 RSL1D1O76021 490 aaKnown RBP20.35■□□□□ 0.85
SSBP3-216ENST00000610401 GOT2P00505 430 aaKnown RBP20.35■□□□□ 0.85
SSBP3-216ENST00000610401 SCAPQ12770 1279 aa20.35■□□□□ 0.85
SSBP3-216ENST00000610401 SLC2A7Q6PXP3 512 aa20.35■□□□□ 0.85
SSBP3-216ENST00000610401 CDYL2Q8N8U2 506 aa20.35■□□□□ 0.85
SSBP3-216ENST00000610401 TBCDQ9BTW9 1192 aa20.35■□□□□ 0.85
SSBP3-216ENST00000610401 BPIFA1Q9NP55 256 aa20.35■□□□□ 0.85
SSBP3-216ENST00000610401 VTA1Q9NP79 307 aa20.35■□□□□ 0.85
SSBP3-216ENST00000610401 PFDN4Q9NQP4 134 aa20.35■□□□□ 0.85
SSBP3-216ENST00000610401 GALPQ9UBC7 116 aa20.35■□□□□ 0.85
SSBP3-216ENST00000610401 HS3ST4Q9Y661 456 aa20.35■□□□□ 0.85
SSBP3-216ENST00000610401 NUP214P35658 2090 aaPredicted RBP20.35■□□□□ 0.85
SSBP3-216ENST00000610401 A0A1W2PQH9 124 aa20.35■□□□□ 0.85
SSBP3-216ENST00000610401 HHLA1C9JL84 531 aa20.35■□□□□ 0.85
SSBP3-216ENST00000610401 EFEMP1Q12805 493 aa20.35■□□□□ 0.85
SSBP3-216ENST00000610401 MARC1Q5VT66 337 aa20.35■□□□□ 0.85
SSBP3-216ENST00000610401 GABRDO14764 452 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 MATN1P21941 496 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 DGKQP52824 942 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 SLC44A4Q53GD3 710 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 SIRPB2Q5JXA9 342 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 PERM1Q5SV97 790 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 ZNF549Q6P9A3 640 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 PAQR3Q6TCH7 311 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 KLHL23Q8NBE8 558 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 OR10T2Q8NGX3 314 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 FBXO30Q8TB52 745 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 TINF2Q9BSI4 451 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 CCM2LQ9NUG4 571 aaPredicted RBP20.34■□□□□ 0.85
SSBP3-216ENST00000610401 IKZF3Q9UKT9 509 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 RNF112Q9ULX5 631 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 FXYD1O00168 92 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 CXCL11O14625 94 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 SLC22A2O15244 555 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 C21orf59P57076 290 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 ACAP2Q15057 778 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 ADRM1Q16186 407 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 C18orf21Q32NC0 220 aaPredicted RBP20.34■□□□□ 0.85
SSBP3-216ENST00000610401 PM20D1Q6GTS8 502 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 ITIH5Q86UX2 942 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 GPC2Q8N158 579 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 MAML3Q96JK9 1138 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 RPF2Q9H7B2 306 aaKnown RBP20.34■□□□□ 0.85
SSBP3-216ENST00000610401 MRPL40Q9NQ50 206 aaKnown RBP20.34■□□□□ 0.85
SSBP3-216ENST00000610401 ARL5CA6NH57 179 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 S1PR4O95977 384 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 PRKACGP22612 351 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 CSRP3P50461 194 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 NUP107P57740 925 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 LAPTM4AQ15012 233 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 KIAA0930Q6ICG6 404 aaPredicted RBP20.34■□□□□ 0.85
SSBP3-216ENST00000610401 GPR142Q7Z601 462 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 TLK2Q86UE8 772 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 TMEM126BQ8IUX1 230 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms