RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 CRTC1Q6UUV9 634 aa13.68□□□□□ -0.22
IRF3-229ENST00000601373 SERPINA13PQ6UXR4 307 aa13.68□□□□□ -0.22
IRF3-229ENST00000601373 CERS6Q6ZMG9 384 aa13.68□□□□□ -0.22
IRF3-229ENST00000601373 DSG4Q86SJ6 1040 aa13.68□□□□□ -0.22
IRF3-229ENST00000601373 FAM45AQ8TCE6 357 aa13.68□□□□□ -0.22
IRF3-229ENST00000601373 GRIN3AQ8TCU5 1115 aa13.68□□□□□ -0.22
IRF3-229ENST00000601373 ATXN7L3BQ96GX2 97 aa13.68□□□□□ -0.22
IRF3-229ENST00000601373 TSNARE1Q96NA8 513 aa13.68□□□□□ -0.22
IRF3-229ENST00000601373 PAIP2Q9BPZ3 127 aaKnown RBP13.68□□□□□ -0.22
IRF3-229ENST00000601373 RAD18Q9NS91 495 aa13.68□□□□□ -0.22
IRF3-229ENST00000601373 MARCH4Q9P2E8 410 aaPredicted RBP13.68□□□□□ -0.22
IRF3-229ENST00000601373 FKBPLQ9UIM3 349 aa13.68□□□□□ -0.22
IRF3-229ENST00000601373 SLC30A1Q9Y6M5 507 aa13.68□□□□□ -0.22
IRF3-229ENST00000601373 KIAA1549LQ6ZVL6 1849 aa13.68□□□□□ -0.22
IRF3-229ENST00000601373 A0A087X1B8 175 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 NPIPB15A6NHN6 443 aaPredicted RBP13.67□□□□□ -0.22
IRF3-229ENST00000601373 UPK3BL1B0FP48 263 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 UPK3BL2E5RIL1 263 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 MBTPS2O43462 519 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 NDUFS3O75489 264 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 CLDN7O95471 211 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 SLC4A1P02730 911 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 DHRS4L1P0CG22 281 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 HNRNPLP14866 589 aaKnown RBP eCLIP13.67□□□□□ -0.22
IRF3-229ENST00000601373 TIMP2P16035 220 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 ETV4P43268 484 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 CSRP3P50461 194 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 GALK1P51570 392 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 SUOXP51687 545 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 RAB10P61026 200 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 MESP2Q0VG99 397 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 ARHGEF7Q14155 803 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 ELAVL3Q14576 367 aaKnown RBP13.67□□□□□ -0.22
IRF3-229ENST00000601373 DBN1Q16643 649 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 C9orf64Q5T6V5 341 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 CNSTQ6PJW8 725 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 RGS9BPQ6ZS82 235 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 RAPH1Q70E73 1250 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 BMP8AQ7Z5Y6 402 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 TRIM42Q8IWZ5 723 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 RAVER1Q8IY67 606 aaKnown RBP13.67□□□□□ -0.22
IRF3-229ENST00000601373 STK40Q8N2I9 435 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 GPATCH11Q8N954 259 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 GDAP1Q8TB36 358 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 CHMP6Q96FZ7 201 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 ELMO2Q96JJ3 720 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 P2RY13Q9BPV8 354 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 BPIFA1Q9NP55 256 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 MLXIPLQ9NP71 852 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.67□□□□□ -0.22
IRF3-229ENST00000601373 SLC17A7Q9P2U7 560 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 ACOT9Q9Y305 439 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 VWA7Q9Y334 891 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 COMMD10Q9Y6G5 202 aa13.67□□□□□ -0.22
IRF3-229ENST00000601373 C16orf96A6NNT2 1141 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 CTSLP07711 333 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 ITGALP20701 1170 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 VIPR1P32241 457 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 SPAM1P38567 509 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 SLC26A3P40879 764 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 ABCG1P45844 678 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 KPNA2P52292 529 aaKnown RBP13.66□□□□□ -0.22
IRF3-229ENST00000601373 XIAPP98170 497 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 PEX6Q13608 980 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 PTPRRQ15256 657 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 ZKSCAN8Q15776 578 aaPredicted RBP13.66□□□□□ -0.22
IRF3-229ENST00000601373 PDK4Q16654 411 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 CCDC153Q494R4 210 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 GPR33Q49SQ1 333 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 ZRANB3Q5FWF4 1079 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 HECTD2Q5U5R9 776 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 LRRC66Q68CR7 880 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 ERAP2Q6P179 960 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 CDHR3Q6ZTQ4 885 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 SNX20Q7Z614 316 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 CMC1Q7Z7K0 106 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 TTC7BQ86TV6 843 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 RALGPS2Q86X27 583 aaPredicted RBP13.66□□□□□ -0.22
IRF3-229ENST00000601373 SLC41A1Q8IVJ1 513 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 DTX3LQ8TDB6 740 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 KCNV2Q8TDN2 545 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 DNASE1L2Q92874 299 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 PBXIP1Q96AQ6 731 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 EID2BQ96D98 161 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 PPP1R16AQ96I34 528 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 FAM111AQ96PZ2 611 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 OMDQ99983 421 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 CCDC68Q9H2F9 335 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 MTG2Q9H4K7 406 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 C8orf33Q9H7E9 229 aaPredicted RBP13.66□□□□□ -0.22
IRF3-229ENST00000601373 CAB39LQ9H9S4 337 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 PKD2L2Q9NZM6 624 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 B4GALT6Q9UBX8 382 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 MID2Q9UJV3 735 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 PPM1HQ9ULR3 514 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 ZNF318Q5VUA4 2279 aa13.66□□□□□ -0.22
IRF3-229ENST00000601373 GLYATL1P3A0A0U1RQE8 302 aa13.65□□□□□ -0.22
IRF3-229ENST00000601373 RGSL1A5PLK6 1076 aa13.65□□□□□ -0.22
IRF3-229ENST00000601373 C2CD4DB7Z1M9 353 aa13.65□□□□□ -0.22
IRF3-229ENST00000601373 C1QTNF3-AMACRE9PGA6 284 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms