RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 FGF1P05230 155 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 COL6A2P12110 1019 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 CST5P28325 142 aaPredicted RBP11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 EEF1DP29692 281 aaKnown RBP11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 MC4RP32245 332 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 MS4A2Q01362 244 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 CAPRIN1Q14444 709 aaKnown RBP11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 FUT11Q495W5 492 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 FAM26DQ5JW98 314 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 BEND5Q7L4P6 421 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 CNTN4Q8IWV2 1026 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 ICA1LQ8NDH6 482 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 OR6Y1Q8NGX8 325 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 DDI1Q8WTU0 396 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 ERLEC1Q96DZ1 483 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 RPL10LQ96L21 214 aaKnown RBP11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 C3orf30Q96M34 536 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 PPP1R2P1Q96PQ5 205 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 CENPKQ9BS16 269 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 VCX3BQ9H321 246 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 VCX3AQ9NNX9 186 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 TLR9Q9NR96 1032 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 CD274Q9NZQ7 290 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 AFF4Q9UHB7 1163 aaKnown RBP11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 PEX1O43933 1283 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 NDST3O95803 873 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 LYNP07948 512 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 DPP6P42658 865 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 NRF1Q16656 503 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 USP41Q3LFD5 358 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 AFMIDQ63HM1 303 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 PSAPL1Q6NUJ1 521 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 RNF111Q6ZNA4 994 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 KIAA0408Q6ZU52 694 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 ISCA2Q86U28 154 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 PIANPQ8IYJ0 282 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 ZNF683Q8IZ20 524 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 SCML4Q8N228 414 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 NSMCE3Q96MG7 304 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 ACOX2Q99424 681 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 APOL5Q9BWW9 433 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 SMG9Q9H0W8 520 aaKnown RBP11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 C1orf21Q9H246 121 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 MFSD1Q9H3U5 465 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 POLR3BQ9NW08 1133 aaPredicted RBP11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 TARM1B6A8C7 271 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 CRTAMO95727 393 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 ALOX15P16050 662 aaPredicted RBP11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 HLA-DPA1P20036 260 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 HTR7P34969 479 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 MAGEA11P43364 429 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 FAM45BPQ6NSW5 357 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 FAM151BQ6UXP7 276 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 FBXO39Q8N4B4 442 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 RP9Q8TA86 221 aaKnown RBP11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 FAM45AQ8TCE6 357 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 BRSK1Q8TDC3 778 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 DIS3LQ8TF46 1054 aaKnown RBP11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 CNBD2Q96M20 576 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 PRICKLE1Q96MT3 831 aaPredicted RBP11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 PHF12Q96QT6 1004 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 TNKS2Q9H2K2 1166 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 EGFL7Q9UHF1 273 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 AURKCQ9UQB9 309 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 A0A1B0GTL3 188 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 PIP5K1BO14986 540 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 INSIG1O15503 277 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 SNX2O60749 519 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 BAIAP3O94812 1187 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 HOXD9P28356 352 aaPredicted RBP11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 PIK3CGP48736 1102 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 PRKAA2P54646 552 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 PSME3P61289 254 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 FAM189BP81408 668 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 CYP4F8P98187 520 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 ACAP2Q15057 778 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 VPS26BQ4G0F5 336 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 SGO1Q5FBB7 561 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 CAMK1DQ8IU85 385 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 CPNE9Q8IYJ1 553 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 MDGA1Q8NFP4 955 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 HIC2Q96JB3 615 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 KLHL4Q9C0H6 718 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 ZBTB26Q9HCK0 441 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 DTNAQ9Y4J8 743 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 TRPM7Q96QT4 1865 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 TSC2P49815 1807 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 MYOCOSA0A1B0GUC4 107 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 ZNF840PA6NDX5 716 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 E7ENX8 843 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 SLCO1B7G3V0H7 640 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 MRASO14807 208 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 STC2O76061 302 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 TRIM16O95361 564 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 ME2P23368 584 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 MTTPP55157 894 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 YBEYP58557 167 aaPredicted RBP11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 SH3BP2P78314 561 aa11.5□□□□□ -0.57
ARHGEF1-220ENST00000600274 GPNMBQ14956 572 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms