RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 ZXDBP98169 803 aa19.64■□□□□ 0.74
CLIP3-206ENST00000593074 CYLC2Q14093 348 aaPredicted RBP19.64■□□□□ 0.74
CLIP3-206ENST00000593074 CHSY3Q70JA7 882 aa19.64■□□□□ 0.74
CLIP3-206ENST00000593074 FBXW8Q8N3Y1 598 aa19.64■□□□□ 0.74
CLIP3-206ENST00000593074 MRPS31Q92665 395 aaKnown RBP19.64■□□□□ 0.74
CLIP3-206ENST00000593074 SMIM14Q96QK8 99 aa19.64■□□□□ 0.74
CLIP3-206ENST00000593074 LBHD1Q9BQE6 289 aaPredicted RBP19.64■□□□□ 0.74
CLIP3-206ENST00000593074 TYW5A2RUC4 315 aaKnown RBP19.64■□□□□ 0.73
CLIP3-206ENST00000593074 H3BMM5 538 aa19.64■□□□□ 0.73
CLIP3-206ENST00000593074 UBFD1O14562 309 aaKnown RBP19.64■□□□□ 0.73
CLIP3-206ENST00000593074 SCAMP3O14828 347 aaKnown RBP19.64■□□□□ 0.73
CLIP3-206ENST00000593074 NVLO15381 856 aaKnown RBP19.64■□□□□ 0.73
CLIP3-206ENST00000593074 FKBP6O75344 327 aa19.64■□□□□ 0.73
CLIP3-206ENST00000593074 SKAP2O75563 359 aaPredicted RBP19.64■□□□□ 0.73
CLIP3-206ENST00000593074 EPHB1P54762 984 aa19.64■□□□□ 0.73
CLIP3-206ENST00000593074 MTTPP55157 894 aa19.64■□□□□ 0.73
CLIP3-206ENST00000593074 AP2B1P63010 937 aa19.64■□□□□ 0.73
CLIP3-206ENST00000593074 OR4D1Q15615 310 aa19.64■□□□□ 0.73
CLIP3-206ENST00000593074 SETMARQ53H47 684 aaPredicted RBP19.64■□□□□ 0.73
CLIP3-206ENST00000593074 AAGABQ6PD74 315 aa19.64■□□□□ 0.73
CLIP3-206ENST00000593074 ATOH8Q96SQ7 321 aa19.64■□□□□ 0.73
CLIP3-206ENST00000593074 TFB2MQ9H5Q4 396 aaKnown RBP19.64■□□□□ 0.73
CLIP3-206ENST00000593074 MRGBPQ9NV56 204 aa19.64■□□□□ 0.73
CLIP3-206ENST00000593074 TAS2R13Q9NYV9 303 aa19.64■□□□□ 0.73
CLIP3-206ENST00000593074 DNMT3BQ9UBC3 853 aaKnown RBP19.64■□□□□ 0.73
CLIP3-206ENST00000593074 PRPF19Q9UMS4 504 aaKnown RBP19.64■□□□□ 0.73
CLIP3-206ENST00000593074 G3BP2Q9UN86 482 aaKnown RBP19.64■□□□□ 0.73
CLIP3-206ENST00000593074 VPS9D1Q9Y2B5 631 aa19.64■□□□□ 0.73
CLIP3-206ENST00000593074 UBA6A0AVT1 1052 aaPredicted RBP19.63■□□□□ 0.73
CLIP3-206ENST00000593074 FGBP02675 491 aa19.63■□□□□ 0.73
CLIP3-206ENST00000593074 ANPEPP15144 967 aa19.63■□□□□ 0.73
CLIP3-206ENST00000593074 ATP6V1C1P21283 382 aa19.63■□□□□ 0.73
CLIP3-206ENST00000593074 NUDT2P50583 147 aa19.63■□□□□ 0.73
CLIP3-206ENST00000593074 C1QTNF8P60827 252 aa19.63■□□□□ 0.73
CLIP3-206ENST00000593074 HTRA4P83105 476 aaPredicted RBP19.63■□□□□ 0.73
CLIP3-206ENST00000593074 ZRSR2Q15696 482 aaKnown RBP19.63■□□□□ 0.73
CLIP3-206ENST00000593074 UNC50Q53HI1 259 aa19.63■□□□□ 0.73
CLIP3-206ENST00000593074 CCDC149Q6ZUS6 474 aa19.63■□□□□ 0.73
CLIP3-206ENST00000593074 TTC30BQ8N4P2 665 aa19.63■□□□□ 0.73
CLIP3-206ENST00000593074 DCAF4L2Q8NA75 395 aa19.63■□□□□ 0.73
CLIP3-206ENST00000593074 KLHL23Q8NBE8 558 aa19.63■□□□□ 0.73
CLIP3-206ENST00000593074 DNAJC9Q8WXX5 260 aa19.63■□□□□ 0.73
CLIP3-206ENST00000593074 JADE3Q92613 823 aa19.63■□□□□ 0.73
CLIP3-206ENST00000593074 N4BP2L2Q92802 583 aaPredicted RBP19.63■□□□□ 0.73
CLIP3-206ENST00000593074 ALG14Q96F25 216 aa19.63■□□□□ 0.73
CLIP3-206ENST00000593074 MARK4Q96L34 752 aa19.63■□□□□ 0.73
CLIP3-206ENST00000593074 DERL2Q9GZP9 239 aa19.63■□□□□ 0.73
CLIP3-206ENST00000593074 VPS51Q9UID3 782 aa19.63■□□□□ 0.73
CLIP3-206ENST00000593074 VPS28Q9UK41 221 aa19.63■□□□□ 0.73
CLIP3-206ENST00000593074 H7C0S8 307 aa19.63■□□□□ 0.73
CLIP3-206ENST00000593074 NDUFS3O75489 264 aa19.63■□□□□ 0.73
CLIP3-206ENST00000593074 RHOBTB1O94844 696 aa19.63■□□□□ 0.73
CLIP3-206ENST00000593074 HSPA1AP0DMV8 641 aaKnown RBP19.63■□□□□ 0.73
CLIP3-206ENST00000593074 HSPA1BP0DMV9 641 aaKnown RBP19.63■□□□□ 0.73
CLIP3-206ENST00000593074 MTHFD2P13995 350 aa19.63■□□□□ 0.73
CLIP3-206ENST00000593074 ACADSP16219 412 aa19.63■□□□□ 0.73
CLIP3-206ENST00000593074 CYP4F8P98187 520 aa19.63■□□□□ 0.73
CLIP3-206ENST00000593074 LILRA6Q6PI73 481 aa19.63■□□□□ 0.73
CLIP3-206ENST00000593074 C16orf89Q6UX73 402 aa19.63■□□□□ 0.73
CLIP3-206ENST00000593074 GAREM2Q75VX8 874 aa19.63■□□□□ 0.73
CLIP3-206ENST00000593074 KYQ8NBH2 561 aa19.63■□□□□ 0.73
CLIP3-206ENST00000593074 WFDC5Q8TCV5 224 aa19.63■□□□□ 0.73
CLIP3-206ENST00000593074 SYTL2Q9HCH5 934 aa19.63■□□□□ 0.73
CLIP3-206ENST00000593074 LSM7Q9UK45 103 aaKnown RBP19.63■□□□□ 0.73
CLIP3-206ENST00000593074 POMPQ9Y244 141 aa19.63■□□□□ 0.73
CLIP3-206ENST00000593074 OAS3Q9Y6K5 1087 aaKnown RBP19.63■□□□□ 0.73
CLIP3-206ENST00000593074 LCHNA4D1U4 455 aa19.62■□□□□ 0.73
CLIP3-206ENST00000593074 FZD6O60353 706 aa19.62■□□□□ 0.73
CLIP3-206ENST00000593074 SRP72O76094 671 aaKnown RBP19.62■□□□□ 0.73
CLIP3-206ENST00000593074 SUPT7LO94864 414 aa19.62■□□□□ 0.73
CLIP3-206ENST00000593074 SORBS2O94875 1100 aaKnown RBP19.62■□□□□ 0.73
CLIP3-206ENST00000593074 LINC00271P0C7V0 271 aa19.62■□□□□ 0.73
CLIP3-206ENST00000593074 FMO4P31512 558 aa19.62■□□□□ 0.73
CLIP3-206ENST00000593074 CCNIQ14094 377 aa19.62■□□□□ 0.73
CLIP3-206ENST00000593074 MUM1Q2TAK8 710 aa19.62■□□□□ 0.73
CLIP3-206ENST00000593074 HPS6Q86YV9 775 aa19.62■□□□□ 0.73
CLIP3-206ENST00000593074 PIANPQ8IYJ0 282 aa19.62■□□□□ 0.73
CLIP3-206ENST00000593074 HS6ST3Q8IZP7 471 aa19.62■□□□□ 0.73
CLIP3-206ENST00000593074 PTGR2Q8N8N7 351 aaPredicted RBP19.62■□□□□ 0.73
CLIP3-206ENST00000593074 MAB21L3Q8N8X9 362 aa19.62■□□□□ 0.73
CLIP3-206ENST00000593074 TTC16Q8NEE8 873 aa19.62■□□□□ 0.73
CLIP3-206ENST00000593074 KIAA1191Q96A73 305 aa19.62■□□□□ 0.73
CLIP3-206ENST00000593074 BIRC8Q96P09 236 aa19.62■□□□□ 0.73
CLIP3-206ENST00000593074 CCDC68Q9H2F9 335 aa19.62■□□□□ 0.73
CLIP3-206ENST00000593074 HACD3Q9P035 362 aa19.62■□□□□ 0.73
CLIP3-206ENST00000593074 FKBPLQ9UIM3 349 aa19.62■□□□□ 0.73
CLIP3-206ENST00000593074 FIS1Q9Y3D6 152 aa19.62■□□□□ 0.73
CLIP3-206ENST00000593074 TRAF6Q9Y4K3 522 aa19.62■□□□□ 0.73
CLIP3-206ENST00000593074 INSL6Q9Y581 213 aa19.62■□□□□ 0.73
CLIP3-206ENST00000593074 AIM2O14862 343 aa19.61■□□□□ 0.73
CLIP3-206ENST00000593074 KERAO60938 352 aa19.61■□□□□ 0.73
CLIP3-206ENST00000593074 ADH1AP07327 375 aa19.61■□□□□ 0.73
CLIP3-206ENST00000593074 CSKP41240 450 aa19.61■□□□□ 0.73
CLIP3-206ENST00000593074 ABL2P42684 1182 aa19.61■□□□□ 0.73
CLIP3-206ENST00000593074 TTPAP49638 278 aa19.61■□□□□ 0.73
CLIP3-206ENST00000593074 RHOAP61586 193 aa19.61■□□□□ 0.73
CLIP3-206ENST00000593074 CDH18Q13634 790 aa19.61■□□□□ 0.73
CLIP3-206ENST00000593074 PSAPL1Q6NUJ1 521 aa19.61■□□□□ 0.73
CLIP3-206ENST00000593074 PAQR3Q6TCH7 311 aa19.61■□□□□ 0.73
CLIP3-206ENST00000593074 DSELQ8IZU8 1212 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms