RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 KIAA1328Q86T90 577 aa10.46□□□□□ -0.73
TPM4-209ENST00000588483 GKN2Q86XP6 184 aa10.46□□□□□ -0.73
TPM4-209ENST00000588483 CCDC50Q8IVM0 306 aa10.46□□□□□ -0.73
TPM4-209ENST00000588483 RNF10Q8N5U6 811 aaKnown RBP10.46□□□□□ -0.73
TPM4-209ENST00000588483 PDCD7Q8N8D1 485 aaKnown RBP10.46□□□□□ -0.73
TPM4-209ENST00000588483 SPC24Q8NBT2 197 aa10.46□□□□□ -0.73
TPM4-209ENST00000588483 OR6C4Q8NGE1 309 aa10.46□□□□□ -0.73
TPM4-209ENST00000588483 GPBAR1Q8TDU6 330 aa10.46□□□□□ -0.73
TPM4-209ENST00000588483 HTR3CQ8WXA8 447 aa10.46□□□□□ -0.73
TPM4-209ENST00000588483 SCG3Q8WXD2 468 aaKnown RBP10.46□□□□□ -0.73
TPM4-209ENST00000588483 NAT6Q93015 286 aa10.46□□□□□ -0.73
TPM4-209ENST00000588483 AP2M1Q96CW1 435 aa10.46□□□□□ -0.73
TPM4-209ENST00000588483 SMIM14Q96QK8 99 aa10.46□□□□□ -0.73
TPM4-209ENST00000588483 FCRL5Q96RD9 977 aa10.46□□□□□ -0.73
TPM4-209ENST00000588483 WDR24Q96S15 920 aa10.46□□□□□ -0.73
TPM4-209ENST00000588483 SRPK1Q96SB4 655 aaKnown RBP10.46□□□□□ -0.73
TPM4-209ENST00000588483 CEP41Q9BYV8 373 aa10.46□□□□□ -0.73
TPM4-209ENST00000588483 OSBPL8Q9BZF1 889 aa10.46□□□□□ -0.73
TPM4-209ENST00000588483 TRNAU1APQ9NX07 287 aaKnown RBP10.46□□□□□ -0.73
TPM4-209ENST00000588483 FAM153AQ9UHL3 310 aa10.46□□□□□ -0.73
TPM4-209ENST00000588483 TRHDEQ9UKU6 1024 aa10.46□□□□□ -0.73
TPM4-209ENST00000588483 CHD6Q8TD26 2715 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 ZFC3H1O60293 1989 aaKnown RBP10.45□□□□□ -0.74
TPM4-209ENST00000588483 A0A0U1RQS6 177 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 ARHGAP6O43182 974 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 TCEA3O75764 348 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 NDST3O95803 873 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 MT-CYBP00156 380 aaPredicted RBP10.45□□□□□ -0.74
TPM4-209ENST00000588483 FUCA1P04066 466 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 PYGMP11217 842 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 CTSEP14091 401 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 GPR1P46091 355 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 NAP1L1P55209 391 aaKnown RBP10.45□□□□□ -0.74
TPM4-209ENST00000588483 KLF1Q13351 362 aaPredicted RBP10.45□□□□□ -0.74
TPM4-209ENST00000588483 RTP5Q14D33 572 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 DENND2CQ68D51 928 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 GUSBP11Q6P575 273 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 ZNF662Q6ZS27 426 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 RFLNAQ6ZTI6 216 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 TMC3Q7Z5M5 1100 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 ZC3H18Q86VM9 953 aaKnown RBP10.45□□□□□ -0.74
TPM4-209ENST00000588483 C17orf82Q86X59 251 aaPredicted RBP10.45□□□□□ -0.74
TPM4-209ENST00000588483 PROSER1Q86XN7 944 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 KLHDC8BQ8IXV7 354 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 ZNF567Q8N184 647 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.45□□□□□ -0.74
TPM4-209ENST00000588483 CCDC112Q8NEF3 446 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 GPR156Q8NFN8 814 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 SPATA22Q8NHS9 363 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 WDR48Q8TAF3 677 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 ACTL9Q8TC94 416 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 IFI44Q8TCB0 444 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 CCHCR1Q8TD31 782 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 DTX3LQ8TDB6 740 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 ZCCHC14Q8WYQ9 949 aaKnown RBP10.45□□□□□ -0.74
TPM4-209ENST00000588483 SCAMP4Q969E2 229 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 GRAMD1AQ96CP6 724 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 EID2BQ96D98 161 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 HES6Q96HZ4 224 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 DESI2Q9BSY9 194 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 NRSN2Q9GZP1 204 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 TMEM168Q9H0V1 697 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 MRPL40Q9NQ50 206 aaKnown RBP10.45□□□□□ -0.74
TPM4-209ENST00000588483 RAD18Q9NS91 495 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 PKD2L2Q9NZM6 624 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 SEPT10Q9P0V9 454 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 VPS18Q9P253 973 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 AMFRQ9UKV5 643 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 ZMIZ1Q9ULJ6 1067 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 CLCA2Q9UQC9 943 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 ADGRG1Q9Y653 693 aa10.45□□□□□ -0.74
TPM4-209ENST00000588483 A0A0U1RQJ8 604 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 MACROD2A1Z1Q3 448 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 FAM149AA5PLN7 773 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 DDX3YO15523 660 aaKnown RBP10.44□□□□□ -0.74
TPM4-209ENST00000588483 TJP3O95049 919 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 MT-CO3P00414 261 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 JUPP14923 745 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 PNLIPP16233 465 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 NFKB1P19838 968 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 CETN2P41208 172 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 OTUD4Q01804 1114 aaKnown RBP10.44□□□□□ -0.74
TPM4-209ENST00000588483 TARDBPQ13148 414 aaKnown RBP eCLIP10.44□□□□□ -0.74
TPM4-209ENST00000588483 MPP3Q13368 585 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 GALNT3Q14435 633 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 LLGL1Q15334 1064 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 CCDC157Q569K6 752 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 PDPK2PQ6A1A2 396 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 B4GALNT4Q76KP1 1039 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 LYSMD3Q7Z3D4 306 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 RD3Q7Z3Z2 195 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 PEX26Q7Z412 305 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 NRROSQ86YC3 692 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 UBL4BQ8N7F7 174 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 KYQ8NBH2 561 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 HAUS1Q96CS2 278 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 NXPE2Q96DL1 559 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 OXNAD1Q96HP4 312 aaPredicted RBP10.44□□□□□ -0.74
TPM4-209ENST00000588483 HIC2Q96JB3 615 aa10.44□□□□□ -0.74
TPM4-209ENST00000588483 MRGPRX2Q96LB1 330 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms