RNA–Protein interactions for RNA: ENST00000584692.1

RHOT1-216, Transcript of ras homolog family member T1, human

TSL 2

Gene RHOT1, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RHOT1-216	ENST00000584692	UBTD1	Q9HAC8	227 aa		4.82	□□□□□ -1.64
RHOT1-216	ENST00000584692	FBRSL1	Q9HCM7	1045 aa	Known RBP	4.82	□□□□□ -1.64
RHOT1-216	ENST00000584692	PLSCR4	Q9NRQ2	329 aa		4.82	□□□□□ -1.64
RHOT1-216	ENST00000584692	VDAC3	Q9Y277	283 aa		4.82	□□□□□ -1.64
RHOT1-216	ENST00000584692	TDRD9	Q8NDG6	1382 aa	Known RBP	4.81	□□□□□ -1.64
RHOT1-216	ENST00000584692	CGNL1	Q0VF96	1302 aa		4.81	□□□□□ -1.64
RHOT1-216	ENST00000584692	CLGN	O14967	610 aa		4.81	□□□□□ -1.64
RHOT1-216	ENST00000584692	EPB41L2	O43491	1005 aa	Known RBP	4.81	□□□□□ -1.64
RHOT1-216	ENST00000584692	KRT36	O76013	467 aa		4.81	□□□□□ -1.64
RHOT1-216	ENST00000584692	SPARC	P09486	303 aa		4.81	□□□□□ -1.64
RHOT1-216	ENST00000584692	HSPA1A	P0DMV8	641 aa	Known RBP	4.81	□□□□□ -1.64
RHOT1-216	ENST00000584692	HSPA1B	P0DMV9	641 aa	Known RBP	4.81	□□□□□ -1.64
RHOT1-216	ENST00000584692	S1PR1	P21453	382 aa		4.81	□□□□□ -1.64
RHOT1-216	ENST00000584692	HOXC9	P31274	260 aa		4.81	□□□□□ -1.64
RHOT1-216	ENST00000584692	PBX3	P40426	434 aa		4.81	□□□□□ -1.64
RHOT1-216	ENST00000584692	RPS3A	P61247	264 aa	Known RBP	4.81	□□□□□ -1.64
RHOT1-216	ENST00000584692	CSNK2A1	P68400	391 aa	Predicted RBP	4.81	□□□□□ -1.64
RHOT1-216	ENST00000584692	FRG1	Q14331	258 aa	Known RBP	4.81	□□□□□ -1.64
RHOT1-216	ENST00000584692	ZNF672	Q499Z4	452 aa	Predicted RBP	4.81	□□□□□ -1.64
RHOT1-216	ENST00000584692	UNQ6126/PRO20091	Q6UXV3	157 aa		4.81	□□□□□ -1.64
RHOT1-216	ENST00000584692	DSTYK	Q6XUX3	929 aa		4.81	□□□□□ -1.64
RHOT1-216	ENST00000584692	CACNA2D4	Q7Z3S7	1137 aa		4.81	□□□□□ -1.64
RHOT1-216	ENST00000584692	CCDC13	Q8IYE1	715 aa		4.81	□□□□□ -1.64
RHOT1-216	ENST00000584692	CSNK2A3	Q8NEV1	391 aa		4.81	□□□□□ -1.64
RHOT1-216	ENST00000584692	EVI5L	Q96CN4	794 aa		4.81	□□□□□ -1.64
RHOT1-216	ENST00000584692	MPP4	Q96JB8	637 aa		4.81	□□□□□ -1.64
RHOT1-216	ENST00000584692	TMEM30A	Q9NV96	361 aa		4.81	□□□□□ -1.64
RHOT1-216	ENST00000584692	IRAK4	Q9NWZ3	460 aa		4.81	□□□□□ -1.64
RHOT1-216	ENST00000584692	ACSL5	Q9ULC5	683 aa		4.81	□□□□□ -1.64
RHOT1-216	ENST00000584692	PDS5A	Q29RF7	1337 aa	Known RBP	4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692		A0A0G2JPF8	293 aa		4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	HNRNPCL3	B7ZW38	293 aa		4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	PRAC2	D3DTV9	90 aa		4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	HNRNPCL1	O60812	293 aa	Known RBP	4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	LDB3	O75112	727 aa		4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	NKX2-2	O95096	273 aa		4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	MBD4	O95243	580 aa		4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	CCNDBP1	O95273	360 aa		4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	HNRNPCL4	P0DMR1	293 aa		4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	IL7R	P16871	459 aa		4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	PAX3	P23760	479 aa		4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	MCM3	P25205	808 aa		4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	F2RL1	P55085	397 aa		4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	CEBPZ	Q03701	1054 aa	Known RBP	4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	SLC20A2	Q08357	652 aa		4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	HYAL1	Q12794	435 aa		4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	ZRSR1	Q15695	479 aa	Known RBP	4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	ZNF718	Q3SXZ3	478 aa		4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	CDON	Q4KMG0	1287 aa		4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	SOWAHC	Q53LP3	525 aa	Predicted RBP	4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	KCNT1	Q5JUK3	1230 aa		4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	RGMB	Q6NW40	437 aa		4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	DUS1L	Q6P1R4	473 aa	Known RBP	4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	CYP20A1	Q6UW02	462 aa		4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	ZNF34	Q8IZ26	560 aa		4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	PCDH20	Q8N6Y1	951 aa	Known RBP	4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	ABTB1	Q969K4	478 aa	Predicted RBP	4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	RRNAD1	Q96FB5	475 aa	Known RBP	4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	GRAMD2B	Q96HH9	432 aa		4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	HARBI1	Q96MB7	349 aa		4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	PCGF1	Q9BSM1	259 aa		4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	EVA1A	Q9H8M9	152 aa		4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	ACSS1	Q9NUB1	689 aa	Predicted RBP	4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	CNOT8	Q9UFF9	292 aa	Known RBP	4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	LIMA1	Q9UHB6	759 aa	Known RBP	4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	ADAM18	Q9Y3Q7	739 aa		4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	PSAT1	Q9Y617	370 aa		4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	KCNE2	Q9Y6J6	123 aa		4.8	□□□□□ -1.64
RHOT1-216	ENST00000584692	LILRA5	A6NI73	299 aa		4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692	IFITM10	A6NMD0	228 aa		4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692		F5H0A9	414 aa	Predicted RBP	4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692	BUB3	O43684	328 aa		4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692	IPO7	O95373	1038 aa	Known RBP	4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692	F7	P08709	466 aa	Predicted RBP	4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692	HLA-DOB	P13765	273 aa		4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692	MAN1A1	P33908	653 aa		4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692	TMPO	P42166	694 aa	Known RBP	4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692	DLX5	P56178	289 aa		4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692	NLRP5	P59047	1200 aa		4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692	GRIK2	Q13002	908 aa		4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692	DECR1	Q16698	335 aa		4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692	FAM76B	Q5HYJ3	339 aa		4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692	ZNF280D	Q6N043	979 aa		4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692	TRNP1	Q6NT89	227 aa		4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692	BRAT1	Q6PJG6	821 aa		4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692	GFRAL	Q6UXV0	394 aa		4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692	ZNF771	Q7L3S4	317 aa	Predicted RBP	4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692	CPLX4	Q7Z7G2	160 aa		4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692	EXOC3L1	Q86VI1	746 aa		4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692	SFR1	Q86XK3	245 aa		4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692	TMEM219	Q86XT9	240 aa		4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692	NRROS	Q86YC3	692 aa		4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692	C1orf87	Q8N0U7	546 aa		4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692	BEST3	Q8N1M1	668 aa		4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692	OR14L1P	Q8NHC6	308 aa		4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692	SPATA20	Q8TB22	786 aa		4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692	RHBDF1	Q96CC6	855 aa		4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692	ARHGEF26	Q96DR7	871 aa		4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692	PDZD7	Q9H5P4	517 aa		4.79	□□□□□ -1.64
RHOT1-216	ENST00000584692	POLR1B	Q9H9Y6	1135 aa		4.79	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms