RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 SERPINA4P29622 427 aa8.71□□□□□ -1.02
CDK5RAP3-224ENST00000582275 PRCPP42785 496 aa8.71□□□□□ -1.02
CDK5RAP3-224ENST00000582275 CCL11P51671 97 aa8.71□□□□□ -1.02
CDK5RAP3-224ENST00000582275 YBEYP58557 167 aaPredicted RBP8.71□□□□□ -1.02
CDK5RAP3-224ENST00000582275 HHEXQ03014 270 aa8.71□□□□□ -1.02
CDK5RAP3-224ENST00000582275 PTK2Q05397 1052 aa8.71□□□□□ -1.02
CDK5RAP3-224ENST00000582275 RALGDSQ12967 914 aa8.71□□□□□ -1.02
CDK5RAP3-224ENST00000582275 STIM1Q13586 685 aa8.71□□□□□ -1.02
CDK5RAP3-224ENST00000582275 ACOX1Q15067 660 aa8.71□□□□□ -1.02
CDK5RAP3-224ENST00000582275 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.71□□□□□ -1.02
CDK5RAP3-224ENST00000582275 ARTNQ5T4W7 220 aa8.71□□□□□ -1.02
CDK5RAP3-224ENST00000582275 MANEALQ5VSG8 457 aa8.71□□□□□ -1.02
CDK5RAP3-224ENST00000582275 SLC6A19Q695T7 634 aa8.71□□□□□ -1.02
CDK5RAP3-224ENST00000582275 LEKR1Q6ZMV7 388 aa8.71□□□□□ -1.02
CDK5RAP3-224ENST00000582275 DPPA4Q7L190 304 aa8.71□□□□□ -1.02
CDK5RAP3-224ENST00000582275 SYVN1Q86TM6 617 aa8.71□□□□□ -1.02
CDK5RAP3-224ENST00000582275 TMEM135Q86UB9 458 aa8.71□□□□□ -1.02
CDK5RAP3-224ENST00000582275 PASD1Q8IV76 773 aa8.71□□□□□ -1.02
CDK5RAP3-224ENST00000582275 MCEMP1Q8IX19 187 aa8.71□□□□□ -1.02
CDK5RAP3-224ENST00000582275 SMYD4Q8IYR2 804 aaPredicted RBP8.71□□□□□ -1.02
CDK5RAP3-224ENST00000582275 SFRP1Q8N474 314 aa8.71□□□□□ -1.02
CDK5RAP3-224ENST00000582275 LZTR1Q8N653 840 aa8.71□□□□□ -1.02
CDK5RAP3-224ENST00000582275 MSANTD4Q8NCY6 345 aa8.71□□□□□ -1.02
CDK5RAP3-224ENST00000582275 TBC1D31Q96DN5 1066 aa8.71□□□□□ -1.02
CDK5RAP3-224ENST00000582275 NUS1Q96E22 293 aa8.71□□□□□ -1.02
CDK5RAP3-224ENST00000582275 OR2M4Q96R27 311 aa8.71□□□□□ -1.02
CDK5RAP3-224ENST00000582275 TRIM55Q9BYV6 548 aa8.71□□□□□ -1.02
CDK5RAP3-224ENST00000582275 SIDT1Q9NXL6 827 aaKnown RBP8.71□□□□□ -1.02
CDK5RAP3-224ENST00000582275 SLC17A4Q9Y2C5 497 aa8.71□□□□□ -1.02
CDK5RAP3-224ENST00000582275 TNRC6AQ8NDV7 1962 aaKnown RBP8.71□□□□□ -1.02
CDK5RAP3-224ENST00000582275 OTOGQ6ZRI0 2925 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 FAM237AA0A1B0GTK4 181 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 A0A1W2PQ67 120 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 SSU72P8A0A1W2PR75 194 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 PSMA7O14818 248 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 INSIG1O15503 277 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 BUB1BO60566 1050 aaPredicted RBP8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 KLHL41O60662 606 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 CEACAM4O75871 244 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 KIAA0754O94854 1291 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 PRF1P14222 555 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 PTGER4P35408 488 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 USP8P40818 1118 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 PPP1R2P41236 205 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 CSNK1DP48730 415 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 ITGA1P56199 1179 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 RPS15P62841 145 aaKnown RBP8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 CDK3Q00526 305 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 PARP15Q460N3 678 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 PTPN20Q4JDL3 420 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 PRR30Q53SZ7 412 aaPredicted RBP8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 FAM102AQ5T9C2 384 aaPredicted RBP8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 ZNF658Q5TYW1 1059 aaPredicted RBP8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 ERICH6BQ5W0A0 696 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 SP5Q6BEB4 398 aaPredicted RBP8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 ARCQ7LC44 396 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 GDF7Q7Z4P5 450 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 SLC9B2Q86UD5 537 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 FAM131BQ86XD5 332 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 Q8NA96 180 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 TMEM35BQ8NCS4 154 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 SLC37A2Q8TED4 501 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 C18orf8Q96DM3 657 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 SCARF2Q96GP6 870 aaPredicted RBP8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 FCRL4Q96PJ5 515 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 HERPUD2Q9BSE4 406 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 UNKQ9C0B0 810 aaKnown RBP8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 ACTL8Q9H568 366 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 LHX9Q9NQ69 397 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 NDFIP2Q9NV92 336 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 LHX3Q9UBR4 397 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 UBA2Q9UBT2 640 aaPredicted RBP8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 LNPEPQ9UIQ6 1025 aa8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 MN1Q10571 1320 aaPredicted RBP8.7□□□□□ -1.02
CDK5RAP3-224ENST00000582275 LRIG2O94898 1065 aa8.69□□□□□ -1.02
CDK5RAP3-224ENST00000582275 MAP3K6O95382 1288 aa8.69□□□□□ -1.02
CDK5RAP3-224ENST00000582275 GNA14O95837 355 aa8.69□□□□□ -1.02
CDK5RAP3-224ENST00000582275 F13A1P00488 732 aa8.69□□□□□ -1.02
CDK5RAP3-224ENST00000582275 ZSCAN22P10073 491 aaPredicted RBP8.69□□□□□ -1.02
CDK5RAP3-224ENST00000582275 FGF5P12034 268 aa8.69□□□□□ -1.02
CDK5RAP3-224ENST00000582275 ZNF28P17035 718 aa8.69□□□□□ -1.02
CDK5RAP3-224ENST00000582275 PTPN4P29074 926 aa8.69□□□□□ -1.02
CDK5RAP3-224ENST00000582275 ADRA1BP35368 520 aa8.69□□□□□ -1.02
CDK5RAP3-224ENST00000582275 MAPK9P45984 424 aa8.69□□□□□ -1.02
CDK5RAP3-224ENST00000582275 GABRB2P47870 512 aa8.69□□□□□ -1.02
CDK5RAP3-224ENST00000582275 NDUFA8P51970 172 aa8.69□□□□□ -1.02
CDK5RAP3-224ENST00000582275 MARSP56192 900 aaKnown RBP8.69□□□□□ -1.02
CDK5RAP3-224ENST00000582275 PDE1BQ01064 536 aa8.69□□□□□ -1.02
CDK5RAP3-224ENST00000582275 BCL2L1Q07817 233 aa8.69□□□□□ -1.02
CDK5RAP3-224ENST00000582275 FOXD4L6Q3SYB3 417 aaPredicted RBP8.69□□□□□ -1.02
CDK5RAP3-224ENST00000582275 FOXD4L3Q6VB84 417 aaPredicted RBP8.69□□□□□ -1.02
CDK5RAP3-224ENST00000582275 BNIPLQ7Z465 357 aa8.69□□□□□ -1.02
CDK5RAP3-224ENST00000582275 BPHLQ86WA6 291 aaPredicted RBP8.69□□□□□ -1.02
CDK5RAP3-224ENST00000582275 PPP1R3BQ86XI6 285 aa8.69□□□□□ -1.02
CDK5RAP3-224ENST00000582275 ZNF761Q86XN6 746 aaPredicted RBP8.69□□□□□ -1.02
CDK5RAP3-224ENST00000582275 CAMK1DQ8IU85 385 aa8.69□□□□□ -1.02
CDK5RAP3-224ENST00000582275 RTL3Q8N8U3 475 aaKnown RBP8.69□□□□□ -1.02
CDK5RAP3-224ENST00000582275 CT55Q8WUE5 264 aa8.69□□□□□ -1.02
CDK5RAP3-224ENST00000582275 ECHDC3Q96DC8 303 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms