RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 AP5M1Q9H0R1 490 aa13.67□□□□□ -0.22
RNF43-205ENST00000581868 SEMA4BQ9NPR2 832 aaPredicted RBP13.67□□□□□ -0.22
RNF43-205ENST00000581868 AGPAT4Q9NRZ5 378 aa13.67□□□□□ -0.22
RNF43-205ENST00000581868 OSER1Q9NX31 292 aa13.67□□□□□ -0.22
RNF43-205ENST00000581868 CDC14AQ9UNH5 594 aa13.67□□□□□ -0.22
RNF43-205ENST00000581868 V9GYQ6 96 aa13.67□□□□□ -0.22
RNF43-205ENST00000581868 FNDC1Q4ZHG4 1894 aaPredicted RBP13.67□□□□□ -0.22
RNF43-205ENST00000581868 MROH6A6NGR9 719 aa13.67□□□□□ -0.22
RNF43-205ENST00000581868 AQP12BA6NM10 295 aa13.67□□□□□ -0.22
RNF43-205ENST00000581868 ARPC2O15144 300 aa13.67□□□□□ -0.22
RNF43-205ENST00000581868 FOXD2O60548 495 aaPredicted RBP13.67□□□□□ -0.22
RNF43-205ENST00000581868 PAPSS2O95340 614 aaPredicted RBP13.67□□□□□ -0.22
RNF43-205ENST00000581868 WISP3O95389 354 aaPredicted RBP13.67□□□□□ -0.22
RNF43-205ENST00000581868 GLP2RO95838 553 aa13.67□□□□□ -0.22
RNF43-205ENST00000581868 GOT2P00505 430 aaKnown RBP13.67□□□□□ -0.22
RNF43-205ENST00000581868 MT-ND1P03886 318 aa13.67□□□□□ -0.22
RNF43-205ENST00000581868 PRSS56P0CW18 603 aa13.67□□□□□ -0.22
RNF43-205ENST00000581868 HTR7P34969 479 aa13.67□□□□□ -0.22
RNF43-205ENST00000581868 CCL14Q16627 93 aa13.67□□□□□ -0.22
RNF43-205ENST00000581868 CYP51A1Q16850 503 aa13.67□□□□□ -0.22
RNF43-205ENST00000581868 RABL3Q5HYI8 236 aa13.67□□□□□ -0.22
RNF43-205ENST00000581868 KLHL35Q6PF15 583 aa13.67□□□□□ -0.22
RNF43-205ENST00000581868 AQP12AQ8IXF9 295 aa13.67□□□□□ -0.22
RNF43-205ENST00000581868 MINDY1Q8N5J2 469 aa13.67□□□□□ -0.22
RNF43-205ENST00000581868 ISOC1Q96CN7 298 aa13.67□□□□□ -0.22
RNF43-205ENST00000581868 PIF1Q9H611 641 aa13.67□□□□□ -0.22
RNF43-205ENST00000581868 DNAAF2Q9NVR5 837 aaKnown RBP13.67□□□□□ -0.22
RNF43-205ENST00000581868 GID8Q9NWU2 228 aa13.67□□□□□ -0.22
RNF43-205ENST00000581868 HACD3Q9P035 362 aa13.67□□□□□ -0.22
RNF43-205ENST00000581868 ABCD2Q9UBJ2 740 aa13.67□□□□□ -0.22
RNF43-205ENST00000581868 POLG2Q9UHN1 485 aa13.67□□□□□ -0.22
RNF43-205ENST00000581868 TIMM22Q9Y584 194 aa13.67□□□□□ -0.22
RNF43-205ENST00000581868 CD3EAPO15446 510 aaKnown RBP13.66□□□□□ -0.22
RNF43-205ENST00000581868 LDB2O43679 373 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 CRCPO75575 148 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 BAIAP3O94812 1187 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 ITGB1P05556 798 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 ZNF865P0CJ78 1059 aaPredicted RBP13.66□□□□□ -0.22
RNF43-205ENST00000581868 LBPP18428 481 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 SEMA3AQ14563 771 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 INTS11Q5TA45 600 aaKnown RBP13.66□□□□□ -0.22
RNF43-205ENST00000581868 PRMT9Q6P2P2 845 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 SCIMPQ6UWF3 145 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 MFSD2AQ8NA29 543 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 OR13C4Q8NGS5 318 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 SNRNP27Q8WVK2 155 aaKnown RBP13.66□□□□□ -0.22
RNF43-205ENST00000581868 SOX17Q9H6I2 414 aaPredicted RBP13.66□□□□□ -0.22
RNF43-205ENST00000581868 CIDEBQ9UHD4 219 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 SUPT3HB4E1H0 165 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 TMX2-CTNND1H3BSU7 103 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 EI24O14681 340 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 CLASP2O75122 1294 aaKnown RBP13.66□□□□□ -0.22
RNF43-205ENST00000581868 SUPT3HO75486 399 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 MTHFD2P13995 350 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 FDXRP22570 491 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 MYF6P23409 242 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 ENTPD1P49961 510 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 TIAL1Q01085 375 aaKnown RBP eCLIP13.66□□□□□ -0.228e-14■■■■□ 25.7
RNF43-205ENST00000581868 CTBSQ01459 385 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 TSPY1Q01534 308 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 NFYCQ13952 458 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 ZBED5Q49AG3 693 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 LRRC49Q8IUZ0 686 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 PHYKPLQ8IUZ5 450 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 ADGRG5Q8IZF4 528 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 SCML4Q8N228 414 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 PGBD5Q8N414 524 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 C12orf43Q96C57 262 aaKnown RBP13.66□□□□□ -0.22
RNF43-205ENST00000581868 CENPNQ96H22 339 aaPredicted RBP13.66□□□□□ -0.22
RNF43-205ENST00000581868 PKMYT1Q99640 499 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 C9orf16Q9BUW7 83 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 VPS45Q9NRW7 570 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 ACTR3BQ9P1U1 418 aa13.66□□□□□ -0.22
RNF43-205ENST00000581868 UBA6A0AVT1 1052 aaPredicted RBP13.65□□□□□ -0.22
RNF43-205ENST00000581868 CCDC162PA2VCL2 907 aa13.65□□□□□ -0.22
RNF43-205ENST00000581868 CLOCKO15516 846 aa13.65□□□□□ -0.22
RNF43-205ENST00000581868 FGF4P08620 206 aa13.65□□□□□ -0.22
RNF43-205ENST00000581868 HSD17B1P14061 328 aa13.65□□□□□ -0.22
RNF43-205ENST00000581868 EEF1DP29692 281 aaKnown RBP13.65□□□□□ -0.22
RNF43-205ENST00000581868 SLC26A3P40879 764 aa13.65□□□□□ -0.22
RNF43-205ENST00000581868 NFKB2Q00653 900 aa13.65□□□□□ -0.22
RNF43-205ENST00000581868 BNIP2Q12982 314 aa13.65□□□□□ -0.22
RNF43-205ENST00000581868 GALNT3Q14435 633 aa13.65□□□□□ -0.22
RNF43-205ENST00000581868 KCTD21Q4G0X4 260 aa13.65□□□□□ -0.22
RNF43-205ENST00000581868 BEND5Q7L4P6 421 aa13.65□□□□□ -0.22
RNF43-205ENST00000581868 CIR1Q86X95 450 aaPredicted RBP13.65□□□□□ -0.22
RNF43-205ENST00000581868 CPNE9Q8IYJ1 553 aa13.65□□□□□ -0.22
RNF43-205ENST00000581868 THEM5Q8N1Q8 247 aa13.65□□□□□ -0.22
RNF43-205ENST00000581868 PACRGLQ8N7B6 248 aa13.65□□□□□ -0.22
RNF43-205ENST00000581868 FEM1CQ96JP0 617 aa13.65□□□□□ -0.22
RNF43-205ENST00000581868 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.65□□□□□ -0.22
RNF43-205ENST00000581868 FAM50BQ9Y247 325 aa13.65□□□□□ -0.22
RNF43-205ENST00000581868 GIT1Q9Y2X7 761 aa13.65□□□□□ -0.22
RNF43-205ENST00000581868 NCF1BA6NI72 391 aaPredicted RBP13.65□□□□□ -0.22
RNF43-205ENST00000581868 NCF1CA8MVU1 366 aaPredicted RBP13.65□□□□□ -0.22
RNF43-205ENST00000581868 TNFRSF10BO14763 440 aa13.65□□□□□ -0.22
RNF43-205ENST00000581868 ATXN1LP0C7T5 689 aaKnown RBP13.65□□□□□ -0.22
RNF43-205ENST00000581868 NCF1P14598 390 aaPredicted RBP13.65□□□□□ -0.22
RNF43-205ENST00000581868 ZNF37AP17032 561 aaPredicted RBP13.65□□□□□ -0.22
RNF43-205ENST00000581868 CCT8P50990 548 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms