RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 KRT35Q92764 455 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 FATE1Q969F0 183 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 AGAP3Q96P47 875 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 PANX2Q96RD6 677 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 UCN2Q96RP3 112 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 RBM15Q96T37 977 aaKnown RBP eCLIP9.7□□□□□ -0.86
TOP3A-211ENST00000581536 AGAP2Q99490 1192 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 SLC13A1Q9BZW2 595 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 POLR1EQ9GZS1 481 aaKnown RBP9.7□□□□□ -0.86
TOP3A-211ENST00000581536 LACRTQ9GZZ8 138 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 TMEM168Q9H0V1 697 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 ABCG8Q9H221 673 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 C10orf88Q9H8K7 445 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 DDX56Q9NY93 547 aaKnown RBP9.7□□□□□ -0.86
TOP3A-211ENST00000581536 SEPT10Q9P0V9 454 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 SIRPGQ9P1W8 387 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 GULP1Q9UBP9 304 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 A0A0J9YYE9 177 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 A0A1W2PQ67 120 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 GOLGA6CA6NDK9 693 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 GOLGA6BA6NDN3 693 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 TTLL8A6PVC2 850 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 LMO7DNF2Z398 122 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 TOR1BO14657 336 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 OPA1O60313 960 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 CST8O60676 142 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 MT-CO3P00414 261 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 TNFP01375 233 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 TRBC1P01850 177 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 GOLGA6DP0CG33 693 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 ALPPL2P10696 532 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 CYP2A6P11509 494 aaPredicted RBP9.69□□□□□ -0.86
TOP3A-211ENST00000581536 MX2P20592 715 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 TGM2P21980 687 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 MTM1Q13496 603 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 SPA17Q15506 151 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 HS1BP3Q53T59 392 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 RALGPS1Q5JS13 557 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 LRRC66Q68CR7 880 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 ALG1LQ6GMV1 187 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 ESRP1Q6NXG1 681 aaKnown RBP9.69□□□□□ -0.86
TOP3A-211ENST00000581536 ZCCHC8Q6NZY4 707 aaKnown RBP9.69□□□□□ -0.86
TOP3A-211ENST00000581536 SPOCD1Q6ZMY3 1216 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 EFL1Q7Z2Z2 1120 aaKnown RBP9.69□□□□□ -0.86
TOP3A-211ENST00000581536 TMTC1Q8IUR5 882 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 SLC35F3Q8IY50 421 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 SPC24Q8NBT2 197 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 SPATA22Q8NHS9 363 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.69□□□□□ -0.86
TOP3A-211ENST00000581536 SCAMP4Q969E2 229 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 NUS1Q96E22 293 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 DTD2Q96FN9 168 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 PDXPQ96GD0 296 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 WDR92Q96MX6 357 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 OLFM3Q96PB7 478 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 MCCC1Q96RQ3 725 aaPredicted RBP9.69□□□□□ -0.86
TOP3A-211ENST00000581536 INSM2Q96T92 566 aaPredicted RBP9.69□□□□□ -0.86
TOP3A-211ENST00000581536 HERPUD2Q9BSE4 406 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 DUSP23Q9BVJ7 150 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 BOCQ9BWV1 1114 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 HEMGNQ9BXL5 484 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 BRD8Q9H0E9 1235 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 CCDC86Q9H6F5 360 aaKnown RBP9.69□□□□□ -0.86
TOP3A-211ENST00000581536 SUDS3Q9H7L9 328 aaPredicted RBP9.69□□□□□ -0.86
TOP3A-211ENST00000581536 PCDH9Q9HC56 1237 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 CYP4F12Q9HCS2 524 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 FGF22Q9HCT0 170 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 GOLGA6AQ9NYA3 693 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 KLQ9UEF7 1012 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 MOSPD1Q9UJG1 213 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 TMEM98Q9Y2Y6 226 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 PLEKHM1Q9Y4G2 1056 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 ST14Q9Y5Y6 855 aa9.69□□□□□ -0.86
TOP3A-211ENST00000581536 EME2A4GXA9 379 aaPredicted RBP9.68□□□□□ -0.86
TOP3A-211ENST00000581536 ZNF487B1APH4 448 aa9.68□□□□□ -0.86
TOP3A-211ENST00000581536 ANKRD66B4E2M5 251 aa9.68□□□□□ -0.86
TOP3A-211ENST00000581536 TPP1O14773 563 aa9.68□□□□□ -0.86
TOP3A-211ENST00000581536 ZRANB2O95218 330 aaKnown RBP eCLIP9.68□□□□□ -0.86
TOP3A-211ENST00000581536 RASGRP1O95267 797 aa9.68□□□□□ -0.86
TOP3A-211ENST00000581536 MT-CYBP00156 380 aaPredicted RBP9.68□□□□□ -0.86
TOP3A-211ENST00000581536 SOD1P00441 154 aa9.68□□□□□ -0.86
TOP3A-211ENST00000581536 CEACAM5P06731 702 aa9.68□□□□□ -0.86
TOP3A-211ENST00000581536 ANXA6P08133 673 aa9.68□□□□□ -0.86
TOP3A-211ENST00000581536 HOXC4P09017 264 aaPredicted RBP9.68□□□□□ -0.86
TOP3A-211ENST00000581536 PIRTP0C851 137 aa9.68□□□□□ -0.86
TOP3A-211ENST00000581536 CES1P23141 567 aa9.68□□□□□ -0.86
TOP3A-211ENST00000581536 HTR1BP28222 390 aa9.68□□□□□ -0.86
TOP3A-211ENST00000581536 CYLC1P35663 651 aaPredicted RBP9.68□□□□□ -0.86
TOP3A-211ENST00000581536 EPHB1P54762 984 aa9.68□□□□□ -0.86
TOP3A-211ENST00000581536 IFI35P80217 286 aaPredicted RBP9.68□□□□□ -0.86
TOP3A-211ENST00000581536 E2F1Q01094 437 aa9.68□□□□□ -0.86
TOP3A-211ENST00000581536 ILKQ13418 452 aa9.68□□□□□ -0.86
TOP3A-211ENST00000581536 ARHGEF7Q14155 803 aa9.68□□□□□ -0.86
TOP3A-211ENST00000581536 GALNT3Q14435 633 aa9.68□□□□□ -0.86
TOP3A-211ENST00000581536 PDK1Q15118 436 aa9.68□□□□□ -0.86
TOP3A-211ENST00000581536 ODF2Q5BJF6 829 aa9.68□□□□□ -0.86
TOP3A-211ENST00000581536 CDCP2Q5VXM1 449 aa9.68□□□□□ -0.86
TOP3A-211ENST00000581536 AADACL2Q6P093 401 aa9.68□□□□□ -0.86
TOP3A-211ENST00000581536 DAAM2Q86T65 1068 aa9.68□□□□□ -0.86
TOP3A-211ENST00000581536 ZC3H18Q86VM9 953 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms